RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 PLD6Q8N2A8 252 aaKnown RBP9.25□□□□□ -0.93
SMCHD1-207ENST00000581711 DDX54Q8TDD1 881 aaKnown RBP9.25□□□□□ -0.93
SMCHD1-207ENST00000581711 FAM168AQ92567 244 aa9.25□□□□□ -0.93
SMCHD1-207ENST00000581711 WDR18Q9BV38 432 aa9.25□□□□□ -0.93
SMCHD1-207ENST00000581711 CD8BP10966 210 aa9.24□□□□□ -0.93
SMCHD1-207ENST00000581711 PKN1Q16512 942 aa9.24□□□□□ -0.93
SMCHD1-207ENST00000581711 GALNT12Q8IXK2 581 aa9.24□□□□□ -0.93
SMCHD1-207ENST00000581711 NETO1Q8TDF5 533 aa9.24□□□□□ -0.93
SMCHD1-207ENST00000581711 ADAMTS6Q9UKP5 1117 aa9.24□□□□□ -0.93
SMCHD1-207ENST00000581711 PPP1R9AQ9ULJ8 1098 aa9.24□□□□□ -0.93
SMCHD1-207ENST00000581711 RNASE1P07998 156 aaKnown RBP9.23□□□□□ -0.93
SMCHD1-207ENST00000581711 SSFA2P28290 1259 aa9.23□□□□□ -0.93
SMCHD1-207ENST00000581711 PDE3AQ14432 1141 aa9.23□□□□□ -0.93
SMCHD1-207ENST00000581711 FAM181AQ8N9Y4 354 aa9.23□□□□□ -0.93
SMCHD1-207ENST00000581711 MBNL3Q9NUK0 354 aaKnown RBP9.23□□□□□ -0.93
SMCHD1-207ENST00000581711 CCDC87Q9NVE4 849 aa9.23□□□□□ -0.93
SMCHD1-207ENST00000581711 FAM87AP0C7U9 286 aa9.22□□□□□ -0.93
SMCHD1-207ENST00000581711 CDK5R2Q13319 367 aa9.22□□□□□ -0.93
SMCHD1-207ENST00000581711 ZNF576Q9H609 170 aa9.22□□□□□ -0.93
SMCHD1-207ENST00000581711 SYNGAP1Q96PV0 1343 aa9.22□□□□□ -0.93
SMCHD1-207ENST00000581711 KSR1Q8IVT5 923 aa9.21□□□□□ -0.94
SMCHD1-207ENST00000581711 TMEM40Q8WWA1 233 aa9.21□□□□□ -0.94
SMCHD1-207ENST00000581711 CD96P40200 585 aa9.2□□□□□ -0.94
SMCHD1-207ENST00000581711 LRRN4CLQ8ND94 238 aa9.2□□□□□ -0.94
SMCHD1-207ENST00000581711 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-207ENST00000581711 VAV3Q9UKW4 847 aa9.2□□□□□ -0.94
SMCHD1-207ENST00000581711 U3KQE9 123 aa9.2□□□□□ -0.94
SMCHD1-207ENST00000581711 TMPRSS2O15393 492 aa9.19□□□□□ -0.94
SMCHD1-207ENST00000581711 PRKCQQ04759 706 aa9.19□□□□□ -0.94
SMCHD1-207ENST00000581711 SF3B2Q13435 895 aaKnown RBP9.19□□□□□ -0.94
SMCHD1-207ENST00000581711 PI4K2BQ8TCG2 481 aa9.19□□□□□ -0.94
SMCHD1-207ENST00000581711 ITPKAP23677 461 aa9.18□□□□□ -0.94
SMCHD1-207ENST00000581711 FKBP4Q02790 459 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMCHD1-207ENST00000581711 AP3B2Q13367 1082 aa9.18□□□□□ -0.94
SMCHD1-207ENST00000581711 KIAA0319Q5VV43 1072 aa9.18□□□□□ -0.94
SMCHD1-207ENST00000581711 PIDD1Q9HB75 910 aa9.18□□□□□ -0.94
SMCHD1-207ENST00000581711 CRIM1Q9NZV1 1036 aa9.18□□□□□ -0.94
SMCHD1-207ENST00000581711 TMEM88BA6NKF7 163 aa9.16□□□□□ -0.94
SMCHD1-207ENST00000581711 IFI16Q16666 785 aaKnown RBP9.16□□□□□ -0.94
SMCHD1-207ENST00000581711 USPL1Q5W0Q7 1092 aa9.16□□□□□ -0.94
SMCHD1-207ENST00000581711 WDR89Q96FK6 387 aaPredicted RBP9.16□□□□□ -0.94
SMCHD1-207ENST00000581711 SLC38A3Q99624 504 aa9.16□□□□□ -0.94
SMCHD1-207ENST00000581711 ATXN3LQ9H3M9 355 aa9.16□□□□□ -0.94
SMCHD1-207ENST00000581711 SERPINA10Q9UK55 444 aa9.16□□□□□ -0.94
SMCHD1-207ENST00000581711 LIG1P18858 919 aa9.15□□□□□ -0.94
SMCHD1-207ENST00000581711 SMYD4Q8IYR2 804 aaPredicted RBP9.15□□□□□ -0.94
SMCHD1-207ENST00000581711 FANCD2OSQ96PS1 177 aa9.15□□□□□ -0.94
SMCHD1-207ENST00000581711 EHD4Q9H223 541 aa9.15□□□□□ -0.94
SMCHD1-207ENST00000581711 CCDC86Q9H6F5 360 aaKnown RBP9.15□□□□□ -0.94
SMCHD1-207ENST00000581711 MKNK2Q9HBH9 465 aa9.15□□□□□ -0.94
SMCHD1-207ENST00000581711 MTMR7Q9Y216 660 aa9.15□□□□□ -0.94
SMCHD1-207ENST00000581711 ID3Q02535 119 aa9.14□□□□□ -0.95
SMCHD1-207ENST00000581711 AOC3Q16853 763 aa9.14□□□□□ -0.95
SMCHD1-207ENST00000581711 HRASLS5Q96KN8 279 aa9.14□□□□□ -0.95
SMCHD1-207ENST00000581711 ANO2Q9NQ90 1003 aa9.14□□□□□ -0.95
SMCHD1-207ENST00000581711 LEFTY1O75610 366 aa9.13□□□□□ -0.95
SMCHD1-207ENST00000581711 ABL1P00519 1130 aa9.13□□□□□ -0.95
SMCHD1-207ENST00000581711 CEACAM5P06731 702 aa9.13□□□□□ -0.95
SMCHD1-207ENST00000581711 MESP2Q0VG99 397 aa9.13□□□□□ -0.95
SMCHD1-207ENST00000581711 ZNF211Q13398 564 aaPredicted RBP9.13□□□□□ -0.95
SMCHD1-207ENST00000581711 DISC1Q9NRI5 854 aa9.13□□□□□ -0.95
SMCHD1-207ENST00000581711 SLFN14P0C7P3 912 aa9.12□□□□□ -0.95
SMCHD1-207ENST00000581711 OXCT1P55809 520 aa9.12□□□□□ -0.95
SMCHD1-207ENST00000581711 PTPN12Q05209 780 aaKnown RBP9.12□□□□□ -0.95
SMCHD1-207ENST00000581711 ANGEL2Q5VTE6 544 aaKnown RBP9.12□□□□□ -0.95
SMCHD1-207ENST00000581711 ARHGAP27Q6ZUM4 889 aa9.12□□□□□ -0.95
SMCHD1-207ENST00000581711 DUSP23Q9BVJ7 150 aa9.12□□□□□ -0.95
SMCHD1-207ENST00000581711 ZC3H12CQ9C0D7 883 aaKnown RBP9.12□□□□□ -0.95
SMCHD1-207ENST00000581711 PLAGL2Q9UPG8 496 aa9.12□□□□□ -0.95
SMCHD1-207ENST00000581711 TMEM265A0A087WTH1 108 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 ZNF862O60290 1169 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 TTLL4Q14679 1199 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 KRTAP19-4Q3LI73 84 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 PHLDB3Q6NSJ2 640 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 FLAD1Q8NFF5 587 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 FAM84AQ96KN4 292 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 KRTAP4-11Q9BYQ6 195 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 ABCB6Q9NP58 842 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 NPHS2Q9NP85 383 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 PCDHGC5Q9Y5F6 944 aa9.11□□□□□ -0.95
SMCHD1-207ENST00000581711 LRRC10BA6NIK2 292 aa9.1□□□□□ -0.95
SMCHD1-207ENST00000581711 HCLS1P14317 486 aaPredicted RBP9.1□□□□□ -0.95
SMCHD1-207ENST00000581711 KIF4BQ2VIQ3 1234 aa9.1□□□□□ -0.95
SMCHD1-207ENST00000581711 SLC23A3Q6PIS1 610 aa9.1□□□□□ -0.95
SMCHD1-207ENST00000581711 BHLHE22Q8NFJ8 381 aaPredicted RBP9.1□□□□□ -0.95
SMCHD1-207ENST00000581711 KRTAP9-7A8MTY7 169 aa9.09□□□□□ -0.95
SMCHD1-207ENST00000581711 RNGTTO60942 597 aaKnown RBP9.09□□□□□ -0.95
SMCHD1-207ENST00000581711 RPS26P11Q5JNZ5 115 aaPredicted RBP9.09□□□□□ -0.95
SMCHD1-207ENST00000581711 C14orf37Q86TY3 774 aa9.09□□□□□ -0.95
SMCHD1-207ENST00000581711 ZSWIM9Q86XI8 627 aa9.09□□□□□ -0.95
SMCHD1-207ENST00000581711 NEFLP07196 543 aa9.08□□□□□ -0.96
SMCHD1-207ENST00000581711 ZNF157P51786 506 aaPredicted RBP9.08□□□□□ -0.96
SMCHD1-207ENST00000581711 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
SMCHD1-207ENST00000581711 PRPF40BQ6NWY9 871 aaKnown RBP9.08□□□□□ -0.96
SMCHD1-207ENST00000581711 CILP2Q8IUL8 1156 aa9.08□□□□□ -0.96
SMCHD1-207ENST00000581711 TIMELESSQ9UNS1 1208 aa9.08□□□□□ -0.96
SMCHD1-207ENST00000581711 GSTP1P09211 210 aaKnown RBP9.07□□□□□ -0.96
SMCHD1-207ENST00000581711 ITIH2P19823 946 aa9.07□□□□□ -0.96
SMCHD1-207ENST00000581711 ORC1Q13415 861 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms