RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 ANKRD23Q86SG2 305 aa12.5□□□□□ -0.41
RFFL-208ENST00000581039 KAZALD1Q96I82 304 aa12.5□□□□□ -0.41
RFFL-208ENST00000581039 TRIM47Q96LD4 638 aa12.5□□□□□ -0.41
RFFL-208ENST00000581039 BIN2Q9UBW5 565 aaPredicted RBP12.5□□□□□ -0.41
RFFL-208ENST00000581039 TRIOBPQ9H2D6 2365 aa12.5□□□□□ -0.41
RFFL-208ENST00000581039 CACNA1FO60840 1977 aa12.49□□□□□ -0.41
RFFL-208ENST00000581039 PDE8BO95263 885 aa12.49□□□□□ -0.41
RFFL-208ENST00000581039 OSBPP22059 807 aa12.49□□□□□ -0.41
RFFL-208ENST00000581039 GRK4P32298 578 aa12.49□□□□□ -0.41
RFFL-208ENST00000581039 LRRC24Q50LG9 513 aa12.49□□□□□ -0.41
RFFL-208ENST00000581039 HTATIP2Q9BUP3 242 aa12.49□□□□□ -0.41
RFFL-208ENST00000581039 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 MYPNQ86TC9 1320 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 GJB1P08034 283 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 CCL5P13501 91 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 CTGFP29279 349 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 INPP5BP32019 993 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 GJA8P48165 433 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 UBXN2AP68543 259 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 FAM151AQ8WW52 585 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 SHISA4Q96DD7 197 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 RNF208Q9H0X6 261 aa12.48□□□□□ -0.41
RFFL-208ENST00000581039 BICC1Q9H694 974 aaKnown RBP12.48□□□□□ -0.41
RFFL-208ENST00000581039 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
RFFL-208ENST00000581039 IFIT1P09914 478 aaKnown RBP12.47□□□□□ -0.41
RFFL-208ENST00000581039 ZEB1P37275 1124 aaPredicted RBP12.47□□□□□ -0.41
RFFL-208ENST00000581039 FCGRTP55899 365 aa12.47□□□□□ -0.41
RFFL-208ENST00000581039 RABL6Q3YEC7 729 aaPredicted RBP12.47□□□□□ -0.41
RFFL-208ENST00000581039 VGLL2Q8N8G2 317 aa12.47□□□□□ -0.41
RFFL-208ENST00000581039 WDR66Q8TBY9 1149 aa12.47□□□□□ -0.41
RFFL-208ENST00000581039 MRS2Q9HD23 443 aa12.47□□□□□ -0.41
RFFL-208ENST00000581039 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
RFFL-208ENST00000581039 KCNH4Q9UQ05 1017 aa12.47□□□□□ -0.41
RFFL-208ENST00000581039 NR2E3Q9Y5X4 410 aa12.47□□□□□ -0.41
RFFL-208ENST00000581039 RPAP1Q9BWH6 1393 aaPredicted RBP12.46□□□□□ -0.41
RFFL-208ENST00000581039 UTYO14607 1347 aa12.46□□□□□ -0.41
RFFL-208ENST00000581039 TCP10Q12799 353 aa12.46□□□□□ -0.41
RFFL-208ENST00000581039 PUM3Q15397 648 aaKnown RBP12.46□□□□□ -0.41
RFFL-208ENST00000581039 PARK7Q99497 189 aaKnown RBP12.46□□□□□ -0.41
RFFL-208ENST00000581039 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
RFFL-208ENST00000581039 ARAP2Q8WZ64 1704 aa12.45□□□□□ -0.42
RFFL-208ENST00000581039 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
RFFL-208ENST00000581039 CXCL11O14625 94 aa12.45□□□□□ -0.42
RFFL-208ENST00000581039 PRKCZQ05513 592 aa12.45□□□□□ -0.42
RFFL-208ENST00000581039 CDC42EP5Q6NZY7 148 aa12.45□□□□□ -0.42
RFFL-208ENST00000581039 UBE2Q1Q7Z7E8 422 aa12.45□□□□□ -0.42
RFFL-208ENST00000581039 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
RFFL-208ENST00000581039 KLHDC4Q8TBB5 520 aa12.45□□□□□ -0.42
RFFL-208ENST00000581039 ADGRA2Q96PE1 1338 aa12.44□□□□□ -0.42
RFFL-208ENST00000581039 CYP2C8P10632 490 aa12.44□□□□□ -0.42
RFFL-208ENST00000581039 SLC5A1P13866 664 aa12.44□□□□□ -0.42
RFFL-208ENST00000581039 FGFR2P21802 821 aa12.44□□□□□ -0.42
RFFL-208ENST00000581039 MOGSQ13724 837 aa12.44□□□□□ -0.42
RFFL-208ENST00000581039 NOL9Q5SY16 702 aaKnown RBP12.44□□□□□ -0.42
RFFL-208ENST00000581039 FASTKD5Q7L8L6 764 aaKnown RBP12.44□□□□□ -0.42
RFFL-208ENST00000581039 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
RFFL-208ENST00000581039 U2AF1L4Q8WU68 220 aaKnown RBP12.44□□□□□ -0.42
RFFL-208ENST00000581039 LPIN2Q92539 896 aa12.44□□□□□ -0.42
RFFL-208ENST00000581039 USP40Q9NVE5 1235 aa12.44□□□□□ -0.42
RFFL-208ENST00000581039 DAGLAQ9Y4D2 1042 aa12.44□□□□□ -0.42
RFFL-208ENST00000581039 FARP2O94887 1054 aaPredicted RBP12.43□□□□□ -0.42
RFFL-208ENST00000581039 SGPL1O95470 568 aa12.43□□□□□ -0.42
RFFL-208ENST00000581039 BCRP11274 1271 aa12.43□□□□□ -0.42
RFFL-208ENST00000581039 NFIAQ12857 509 aa12.43□□□□□ -0.42
RFFL-208ENST00000581039 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
RFFL-208ENST00000581039 GPAT2Q6NUI2 795 aa12.43□□□□□ -0.42
RFFL-208ENST00000581039 UNC93B1Q9H1C4 597 aa12.43□□□□□ -0.42
RFFL-208ENST00000581039 PICK1Q9NRD5 415 aa12.43□□□□□ -0.42
RFFL-208ENST00000581039 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
RFFL-208ENST00000581039 ZSWIM8A7E2V4 1837 aa12.43□□□□□ -0.42
RFFL-208ENST00000581039 EYA2O00167 538 aa12.42□□□□□ -0.42
RFFL-208ENST00000581039 ZBTB7BO15156 539 aaPredicted RBP12.42□□□□□ -0.42
RFFL-208ENST00000581039 ADCY3O60266 1144 aa12.42□□□□□ -0.42
RFFL-208ENST00000581039 EVI5O60447 810 aa12.42□□□□□ -0.42
RFFL-208ENST00000581039 TFRCP02786 760 aaKnown RBP12.42□□□□□ -0.42
RFFL-208ENST00000581039 LDHBP07195 334 aaKnown RBP12.42□□□□□ -0.42
RFFL-208ENST00000581039 CAPN2P17655 700 aa12.42□□□□□ -0.42
RFFL-208ENST00000581039 SLC17A8Q8NDX2 589 aa12.42□□□□□ -0.42
RFFL-208ENST00000581039 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
RFFL-208ENST00000581039 GNL3LQ9NVN8 582 aaKnown RBP12.42□□□□□ -0.42
RFFL-208ENST00000581039 FAM198AQ9UFP1 575 aa12.42□□□□□ -0.42
RFFL-208ENST00000581039 GABRQQ9UN88 632 aa12.42□□□□□ -0.42
RFFL-208ENST00000581039 SZT2Q5T011 3432 aa12.42□□□□□ -0.42
RFFL-208ENST00000581039 FLT3LGP49771 235 aa12.41□□□□□ -0.42
RFFL-208ENST00000581039 ZFPM1Q8IX07 1006 aa12.41□□□□□ -0.42
RFFL-208ENST00000581039 SCYL3Q8IZE3 742 aa12.41□□□□□ -0.42
RFFL-208ENST00000581039 PXYLP1Q8TE99 480 aa12.41□□□□□ -0.42
RFFL-208ENST00000581039 USP44Q9H0E7 712 aa12.41□□□□□ -0.42
RFFL-208ENST00000581039 LRRFIP2Q9Y608 721 aaKnown RBP12.41□□□□□ -0.42
RFFL-208ENST00000581039 A0A0G2JLL6 359 aaPredicted RBP12.4□□□□□ -0.42
RFFL-208ENST00000581039 A0A1W2PPC1 479 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 PHF20L1A8MW92 1017 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 DLL1O00548 723 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
RFFL-208ENST00000581039 ELNP15502 786 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 PTPRAP18433 802 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 PRDX5P30044 214 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 GADL1Q6ZQY3 521 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 PRRT2Q7Z6L0 340 aaPredicted RBP12.4□□□□□ -0.42
RFFL-208ENST00000581039 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms