RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 TTC39AQ5SRH9 613 aa32.98■■■□□ 2.87
LINC00271-207ENST00000580741 CCDC8Q9H0W5 538 aaPredicted RBP32.98■■■□□ 2.87
LINC00271-207ENST00000580741 SNRKQ9NRH2 765 aa32.98■■■□□ 2.87
LINC00271-207ENST00000580741 IFFO2Q5TF58 517 aa32.97■■■□□ 2.87
LINC00271-207ENST00000580741 FKBP1CQ5VVH2 108 aa32.97■■■□□ 2.87
LINC00271-207ENST00000580741 SPTY2D1Q68D10 685 aaPredicted RBP32.97■■■□□ 2.87
LINC00271-207ENST00000580741 ERICH6Q7L0X2 663 aa32.97■■■□□ 2.87
LINC00271-207ENST00000580741 FAM83AQ86UY5 434 aa32.97■■■□□ 2.87
LINC00271-207ENST00000580741 SIRT2Q8IXJ6 389 aa32.97■■■□□ 2.87
LINC00271-207ENST00000580741 EAF2Q96CJ1 260 aaPredicted RBP32.97■■■□□ 2.87
LINC00271-207ENST00000580741 USP40Q9NVE5 1235 aa32.97■■■□□ 2.87
LINC00271-207ENST00000580741 DBNLQ9UJU6 430 aaKnown RBP32.97■■■□□ 2.87
LINC00271-207ENST00000580741 NFIAQ12857 509 aa32.96■■■□□ 2.87
LINC00271-207ENST00000580741 CCDC158Q5M9N0 1113 aa32.96■■■□□ 2.87
LINC00271-207ENST00000580741 RPAP2Q8IXW5 612 aaPredicted RBP32.96■■■□□ 2.87
LINC00271-207ENST00000580741 SLC10A4Q96EP9 437 aa32.96■■■□□ 2.87
LINC00271-207ENST00000580741 RNF186Q9NXI6 227 aa32.96■■■□□ 2.87
LINC00271-207ENST00000580741 GAKO14976 1311 aa32.96■■■□□ 2.87
LINC00271-207ENST00000580741 MECOMQ03112 1051 aa32.95■■■□□ 2.87
LINC00271-207ENST00000580741 TCP10Q12799 353 aa32.95■■■□□ 2.87
LINC00271-207ENST00000580741 SPRYD7Q5W111 196 aa32.95■■■□□ 2.87
LINC00271-207ENST00000580741 ZNF384Q8TF68 577 aa32.95■■■□□ 2.87
LINC00271-207ENST00000580741 TRPA1O75762 1119 aa32.94■■■□□ 2.86
LINC00271-207ENST00000580741 MYH2Q9UKX2 1941 aa32.94■■■□□ 2.86
LINC00271-207ENST00000580741 APBB1O00213 710 aa32.93■■■□□ 2.86
LINC00271-207ENST00000580741 ERC1Q8IUD2 1116 aa32.93■■■□□ 2.86
LINC00271-207ENST00000580741 CHMP4BQ9H444 224 aaKnown RBP32.93■■■□□ 2.86
LINC00271-207ENST00000580741 IL1RAPL2Q9NP60 686 aa32.93■■■□□ 2.86
LINC00271-207ENST00000580741 HMMRO75330 724 aa32.92■■■□□ 2.86
LINC00271-207ENST00000580741 ANKRD13AQ8IZ07 590 aa32.92■■■□□ 2.86
LINC00271-207ENST00000580741 WNK4Q96J92 1243 aa32.92■■■□□ 2.86
LINC00271-207ENST00000580741 RAI14Q9P0K7 980 aa32.92■■■□□ 2.86
LINC00271-207ENST00000580741 FAM198AQ9UFP1 575 aa32.92■■■□□ 2.86
LINC00271-207ENST00000580741 MROH7-TTC4A0A0A0MT08 1334 aa32.92■■■□□ 2.86
LINC00271-207ENST00000580741 BTDP43251 543 aa32.91■■■□□ 2.86
LINC00271-207ENST00000580741 SLF2Q8IX21 1173 aa32.91■■■□□ 2.86
LINC00271-207ENST00000580741 REM2Q8IYK8 340 aaPredicted RBP32.91■■■□□ 2.86
LINC00271-207ENST00000580741 FAM151AQ8WW52 585 aa32.91■■■□□ 2.86
LINC00271-207ENST00000580741 SAGE1Q9NXZ1 904 aa32.91■■■□□ 2.86
LINC00271-207ENST00000580741 OTOFQ9HC10 1997 aa32.9■■■□□ 2.86
LINC00271-207ENST00000580741 HSP90AB4PQ58FF6 505 aa32.9■■■□□ 2.86
LINC00271-207ENST00000580741 AACSQ86V21 672 aa32.9■■■□□ 2.86
LINC00271-207ENST00000580741 RHPN1Q8TCX5 695 aa32.9■■■□□ 2.86
LINC00271-207ENST00000580741 NSUN4Q96CB9 384 aaKnown RBP32.9■■■□□ 2.86
LINC00271-207ENST00000580741 FAM163AQ96GL9 167 aaPredicted RBP32.9■■■□□ 2.86
LINC00271-207ENST00000580741 ELP3Q9H9T3 547 aa32.9■■■□□ 2.86
LINC00271-207ENST00000580741 RPAP1Q9BWH6 1393 aaPredicted RBP32.9■■■□□ 2.86
LINC00271-207ENST00000580741 GJA5P36382 358 aa32.89■■■□□ 2.86
LINC00271-207ENST00000580741 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.89■■■□□ 2.86
LINC00271-207ENST00000580741 LRP2BPQ9P2M1 347 aa32.89■■■□□ 2.86
LINC00271-207ENST00000580741 AKAP11Q9UKA4 1901 aa32.89■■■□□ 2.85
LINC00271-207ENST00000580741 UNCXA6NJT0 531 aa32.88■■■□□ 2.85
LINC00271-207ENST00000580741 ZFPM1Q8IX07 1006 aa32.88■■■□□ 2.85
LINC00271-207ENST00000580741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.88■■■□□ 2.85
LINC00271-207ENST00000580741 BCL11AQ9H165 835 aa32.88■■■□□ 2.85
LINC00271-207ENST00000580741 ZAP70P43403 619 aa32.87■■■□□ 2.85
LINC00271-207ENST00000580741 MAP3K9P80192 1104 aa32.87■■■□□ 2.85
LINC00271-207ENST00000580741 VGLL4Q14135 290 aa32.87■■■□□ 2.85
LINC00271-207ENST00000580741 MIGA2Q7L4E1 593 aa32.87■■■□□ 2.85
LINC00271-207ENST00000580741 ZNF512BQ96KM6 892 aaPredicted RBP32.87■■■□□ 2.85
LINC00271-207ENST00000580741 CYP2E1P05181 493 aaPredicted RBP32.86■■■□□ 2.85
LINC00271-207ENST00000580741 TM4SF4P48230 202 aa32.86■■■□□ 2.85
LINC00271-207ENST00000580741 RGS3P49796 1198 aa32.86■■■□□ 2.85
LINC00271-207ENST00000580741 SREBF2Q12772 1141 aa32.86■■■□□ 2.85
LINC00271-207ENST00000580741 GPR75-ASB3A0A0A6YYF3 556 aa32.85■■■□□ 2.85
LINC00271-207ENST00000580741 ZBTB48P10074 688 aaPredicted RBP32.85■■■□□ 2.85
LINC00271-207ENST00000580741 GSTO1P78417 241 aa32.85■■■□□ 2.85
LINC00271-207ENST00000580741 CNKSR2Q8WXI2 1034 aa32.85■■■□□ 2.85
LINC00271-207ENST00000580741 WRNIP1Q96S55 665 aa32.85■■■□□ 2.85
LINC00271-207ENST00000580741 IDI2Q9BXS1 227 aa32.85■■■□□ 2.85
LINC00271-207ENST00000580741 CASP8AP2Q9UKL3 1982 aa32.85■■■□□ 2.85
LINC00271-207ENST00000580741 RFX7Q2KHR2 1363 aa32.84■■■□□ 2.85
LINC00271-207ENST00000580741 OPTNQ96CV9 577 aa32.84■■■□□ 2.85
LINC00271-207ENST00000580741 HOOK2Q96ED9 719 aa32.84■■■□□ 2.85
LINC00271-207ENST00000580741 KIF1BPQ96EK5 621 aa32.84■■■□□ 2.85
LINC00271-207ENST00000580741 DDX4Q9NQI0 724 aaKnown RBP32.84■■■□□ 2.85
LINC00271-207ENST00000580741 PIH1D3Q9NQM4 214 aaKnown RBP32.84■■■□□ 2.85
LINC00271-207ENST00000580741 CSADQ9Y600 493 aa32.84■■■□□ 2.85
LINC00271-207ENST00000580741 NDUFB9Q9Y6M9 179 aa32.84■■■□□ 2.85
LINC00271-207ENST00000580741 WDHD1O75717 1129 aaPredicted RBP32.83■■■□□ 2.85
LINC00271-207ENST00000580741 LDHCP07864 332 aa32.83■■■□□ 2.85
LINC00271-207ENST00000580741 RHBDL3P58872 404 aa32.83■■■□□ 2.85
LINC00271-207ENST00000580741 PICALMQ13492 652 aa32.83■■■□□ 2.85
LINC00271-207ENST00000580741 DCAF15Q66K64 600 aa32.83■■■□□ 2.85
LINC00271-207ENST00000580741 MANSC4A6NHS7 340 aaPredicted RBP32.82■■■□□ 2.84
LINC00271-207ENST00000580741 RRP1P56182 461 aaKnown RBP32.82■■■□□ 2.84
LINC00271-207ENST00000580741 ZNF341Q9BYN7 854 aa32.82■■■□□ 2.84
LINC00271-207ENST00000580741 ENTPD3O75355 529 aa32.81■■■□□ 2.84
LINC00271-207ENST00000580741 CAPN15O75808 1086 aa32.81■■■□□ 2.84
LINC00271-207ENST00000580741 TBC1D8O95759 1140 aa32.81■■■□□ 2.84
LINC00271-207ENST00000580741 CLASRPQ8N2M8 674 aaKnown RBP32.81■■■□□ 2.84
LINC00271-207ENST00000580741 ZKSCAN4Q969J2 545 aaPredicted RBP32.81■■■□□ 2.84
LINC00271-207ENST00000580741 NAA16Q6N069 864 aaPredicted RBP32.8■■■□□ 2.84
LINC00271-207ENST00000580741 SH3BP5LQ7L8J4 393 aa32.8■■■□□ 2.84
LINC00271-207ENST00000580741 SNCAIPQ9Y6H5 919 aa32.8■■■□□ 2.84
LINC00271-207ENST00000580741 AK9Q5TCS8 1911 aa32.8■■■□□ 2.84
LINC00271-207ENST00000580741 RAB11FIP3O75154 756 aa32.79■■■□□ 2.84
LINC00271-207ENST00000580741 ZSCAN29Q8IWY8 852 aaPredicted RBP32.79■■■□□ 2.84
LINC00271-207ENST00000580741 INPP5BP32019 993 aa32.78■■■□□ 2.84
LINC00271-207ENST00000580741 OTUD5Q96G74 571 aa32.78■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms