RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 EPHX2P34913 555 aa17.15■□□□□ 0.34
SKA2-205ENST00000580541 EPS15P42566 896 aa17.15■□□□□ 0.34
SKA2-205ENST00000580541 BTDP43251 543 aa17.15■□□□□ 0.34
SKA2-205ENST00000580541 KIF4BQ2VIQ3 1234 aa17.15■□□□□ 0.34
SKA2-205ENST00000580541 KIAA1211Q6ZU35 1233 aa17.15■□□□□ 0.34
SKA2-205ENST00000580541 CRNKL1Q9BZJ0 848 aaKnown RBP17.15■□□□□ 0.34
SKA2-205ENST00000580541 USP40Q9NVE5 1235 aa17.15■□□□□ 0.34
SKA2-205ENST00000580541 AATFQ9NY61 560 aaKnown RBP eCLIP17.15■□□□□ 0.34
SKA2-205ENST00000580541 RAD50Q92878 1312 aa17.15■□□□□ 0.34
SKA2-205ENST00000580541 SCN4AP35499 1836 aa17.14■□□□□ 0.34
SKA2-205ENST00000580541 NMIQ13287 307 aaPredicted RBP17.14■□□□□ 0.33
SKA2-205ENST00000580541 TBC1D10BQ4KMP7 808 aaPredicted RBP17.14■□□□□ 0.33
SKA2-205ENST00000580541 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
SKA2-205ENST00000580541 SAMD7Q7Z3H4 446 aa17.14■□□□□ 0.33
SKA2-205ENST00000580541 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
SKA2-205ENST00000580541 ZC3H15Q8WU90 426 aaKnown RBP17.14■□□□□ 0.33
SKA2-205ENST00000580541 OSBP2Q969R2 916 aa17.14■□□□□ 0.33
SKA2-205ENST00000580541 PRMT6Q96LA8 375 aaPredicted RBP17.14■□□□□ 0.33
SKA2-205ENST00000580541 MAST2Q6P0Q8 1798 aa17.13■□□□□ 0.33
SKA2-205ENST00000580541 ZNF646O15015 1829 aaPredicted RBP17.13■□□□□ 0.33
SKA2-205ENST00000580541 WNT10BO00744 389 aa17.13■□□□□ 0.33
SKA2-205ENST00000580541 TNFAIP1Q13829 316 aa17.13■□□□□ 0.33
SKA2-205ENST00000580541 FKBP1CQ5VVH2 108 aa17.13■□□□□ 0.33
SKA2-205ENST00000580541 MIGA1Q8NAN2 632 aa17.13■□□□□ 0.33
SKA2-205ENST00000580541 NACAP1Q9BZK3 213 aa17.13■□□□□ 0.33
SKA2-205ENST00000580541 PUS7LQ9H0K6 701 aaKnown RBP17.13■□□□□ 0.33
SKA2-205ENST00000580541 RRAGCQ9HB90 399 aa17.13■□□□□ 0.33
SKA2-205ENST00000580541 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
SKA2-205ENST00000580541 GPAA1O43292 621 aa17.12■□□□□ 0.33
SKA2-205ENST00000580541 MBD4O95243 580 aa17.12■□□□□ 0.33
SKA2-205ENST00000580541 TNNI2P48788 182 aa17.12■□□□□ 0.33
SKA2-205ENST00000580541 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
SKA2-205ENST00000580541 TEX11Q8IYF3 940 aa17.12■□□□□ 0.33
SKA2-205ENST00000580541 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
SKA2-205ENST00000580541 FAM227BQ96M60 508 aa17.12■□□□□ 0.33
SKA2-205ENST00000580541 STRBPQ96SI9 672 aaKnown RBP17.12■□□□□ 0.33
SKA2-205ENST00000580541 TAF1DQ9H5J8 278 aaPredicted RBP17.12■□□□□ 0.33
SKA2-205ENST00000580541 ATP8A2Q9NTI2 1148 aa17.12■□□□□ 0.33
SKA2-205ENST00000580541 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
SKA2-205ENST00000580541 WDR90Q96KV7 1748 aa17.11■□□□□ 0.33
SKA2-205ENST00000580541 PATL2C9JE40 543 aaKnown RBP17.11■□□□□ 0.33
SKA2-205ENST00000580541 REC8O95072 547 aa17.11■□□□□ 0.33
SKA2-205ENST00000580541 APPP05067 770 aa17.11■□□□□ 0.33
SKA2-205ENST00000580541 USP5P45974 858 aa17.11■□□□□ 0.33
SKA2-205ENST00000580541 ADGRA1Q86SQ6 560 aa17.11■□□□□ 0.33
SKA2-205ENST00000580541 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
SKA2-205ENST00000580541 DCPSQ96C86 337 aaKnown RBP17.11■□□□□ 0.33
SKA2-205ENST00000580541 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
SKA2-205ENST00000580541 TDRD3Q9H7E2 651 aaKnown RBP17.11■□□□□ 0.33
SKA2-205ENST00000580541 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
SKA2-205ENST00000580541 SLC4A4Q9Y6R1 1079 aa17.11■□□□□ 0.33
SKA2-205ENST00000580541 CCDC171Q6TFL3 1326 aa17.11■□□□□ 0.33
SKA2-205ENST00000580541 A0A0D9SFI3 127 aa17.1■□□□□ 0.33
SKA2-205ENST00000580541 SGSM2O43147 1006 aa17.1■□□□□ 0.33
SKA2-205ENST00000580541 NBPF9Q3BBW0 867 aa17.1■□□□□ 0.33
SKA2-205ENST00000580541 SPDYE2Q495Y8 402 aa17.1■□□□□ 0.33
SKA2-205ENST00000580541 GIMAP6Q6P9H5 292 aa17.1■□□□□ 0.33
SKA2-205ENST00000580541 APOBEC3FQ8IUX4 373 aaKnown RBP17.1■□□□□ 0.33
SKA2-205ENST00000580541 ESYT1Q9BSJ8 1104 aa17.1■□□□□ 0.33
SKA2-205ENST00000580541 ARMT1Q9H993 441 aa17.1■□□□□ 0.33
SKA2-205ENST00000580541 ZNF70Q9UC06 446 aaPredicted RBP17.1■□□□□ 0.33
SKA2-205ENST00000580541 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
SKA2-205ENST00000580541 M0R2C6 588 aa17.09■□□□□ 0.33
SKA2-205ENST00000580541 YY1P25490 414 aa17.09■□□□□ 0.33
SKA2-205ENST00000580541 RHBDL3P58872 404 aa17.09■□□□□ 0.33
SKA2-205ENST00000580541 DYNLL1P63167 89 aaKnown RBP17.09■□□□□ 0.33
SKA2-205ENST00000580541 SLFNL1Q499Z3 407 aa17.09■□□□□ 0.33
SKA2-205ENST00000580541 EAPPQ56P03 285 aaPredicted RBP17.09■□□□□ 0.33
SKA2-205ENST00000580541 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
SKA2-205ENST00000580541 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
SKA2-205ENST00000580541 SEC62Q99442 399 aaKnown RBP17.09■□□□□ 0.33
SKA2-205ENST00000580541 IDI2Q9BXS1 227 aa17.09■□□□□ 0.33
SKA2-205ENST00000580541 CTNNA3Q9UI47 895 aa17.09■□□□□ 0.33
SKA2-205ENST00000580541 CLEC11AQ9Y240 323 aa17.09■□□□□ 0.33
SKA2-205ENST00000580541 PITPNM2Q9BZ72 1349 aa17.09■□□□□ 0.33
SKA2-205ENST00000580541 POTECB2RU33 542 aa17.08■□□□□ 0.32
SKA2-205ENST00000580541 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
SKA2-205ENST00000580541 ENTPD3O75355 529 aa17.08■□□□□ 0.32
SKA2-205ENST00000580541 FAM83AQ86UY5 434 aa17.08■□□□□ 0.32
SKA2-205ENST00000580541 LCORLQ8N3X6 602 aa17.08■□□□□ 0.32
SKA2-205ENST00000580541 TRPM4Q8TD43 1214 aa17.08■□□□□ 0.32
SKA2-205ENST00000580541 TGFBRAP1Q8WUH2 860 aa17.08■□□□□ 0.32
SKA2-205ENST00000580541 VEZTQ9HBM0 779 aa17.08■□□□□ 0.32
SKA2-205ENST00000580541 CHGBP05060 677 aa17.07■□□□□ 0.32
SKA2-205ENST00000580541 SULF1Q8IWU6 871 aa17.07■□□□□ 0.32
SKA2-205ENST00000580541 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
SKA2-205ENST00000580541 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
SKA2-205ENST00000580541 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
SKA2-205ENST00000580541 PGAP2Q9UHJ9 254 aa17.07■□□□□ 0.32
SKA2-205ENST00000580541 PPP2R3BQ9Y5P8 575 aa17.07■□□□□ 0.32
SKA2-205ENST00000580541 CLRN2A0PK11 232 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 EGFRP00533 1210 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 HSPD1P10809 573 aaKnown RBP17.06■□□□□ 0.32
SKA2-205ENST00000580541 TDO2P48775 406 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
SKA2-205ENST00000580541 ALX1Q15699 326 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 ANGEL2Q5VTE6 544 aaKnown RBP17.06■□□□□ 0.32
SKA2-205ENST00000580541 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 TTC6Q86TZ1 520 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 LDHDQ86WU2 507 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms