RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 GPTP24298 496 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 SSFA2P28290 1259 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 CLCN1P35523 988 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 KCNJ4P48050 445 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 TIMM10P62072 90 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 KRT32Q14532 448 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 MCMDC2Q4G0Z9 681 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 VPS53Q5VIR6 699 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 USPL1Q5W0Q7 1092 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 CREB3L3Q68CJ9 461 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 FAM227BQ96M60 508 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 TTC14Q96N46 770 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 UTP14AQ9BVJ6 771 aaKnown RBP10.84□□□□□ -0.67
SENP3-203ENST00000580231 PAG1Q9NWQ8 432 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 DACH1Q9UI36 760 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 LIMCH1Q9UPQ0 1083 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 RBM8AQ9Y5S9 174 aaKnown RBP10.84□□□□□ -0.67
SENP3-203ENST00000580231 CYP46A1Q9Y6A2 500 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 MED23Q9ULK4 1368 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 SH3TC1Q8TE82 1336 aa10.84□□□□□ -0.67
SENP3-203ENST00000580231 RTL9Q8NET4 1388 aa10.83□□□□□ -0.68
SENP3-203ENST00000580231 A0A0D9SFI3 127 aa10.83□□□□□ -0.68
SENP3-203ENST00000580231 TAF5LO75529 589 aa10.83□□□□□ -0.68
SENP3-203ENST00000580231 CAMTA2O94983 1202 aa10.83□□□□□ -0.68
SENP3-203ENST00000580231 ZFYP08048 801 aaPredicted RBP10.83□□□□□ -0.68
SENP3-203ENST00000580231 ITGA6P23229 1130 aa10.83□□□□□ -0.68
SENP3-203ENST00000580231 ITPK1Q13572 414 aa10.83□□□□□ -0.68
SENP3-203ENST00000580231 ANKRD1Q15327 319 aa10.83□□□□□ -0.68
SENP3-203ENST00000580231 GORABQ5T7V8 394 aa10.83□□□□□ -0.68
SENP3-203ENST00000580231 PRPF40BQ6NWY9 871 aaKnown RBP10.83□□□□□ -0.68
SENP3-203ENST00000580231 LDHAL6AQ6ZMR3 332 aa10.83□□□□□ -0.68
SENP3-203ENST00000580231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
SENP3-203ENST00000580231 PUS3Q9BZE2 481 aaKnown RBP10.83□□□□□ -0.68
SENP3-203ENST00000580231 TNS1Q9HBL0 1735 aaKnown RBP10.82□□□□□ -0.68
SENP3-203ENST00000580231 TTC24A2A3L6 582 aaPredicted RBP10.82□□□□□ -0.68
SENP3-203ENST00000580231 SLC27A2O14975 620 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 AXIN1O15169 862 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 GUCA2AQ02747 115 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 CTC1Q2NKJ3 1217 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 TTC39AQ5SRH9 613 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 ZMYM1Q5SVZ6 1142 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 RUFY3Q7L099 469 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 KRT27Q7Z3Y8 459 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 DEFB132Q7Z7B7 95 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 CCDC125Q86Z20 511 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 XAGE2Q96GT9 111 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 DNAJC2Q99543 621 aaKnown RBP10.82□□□□□ -0.68
SENP3-203ENST00000580231 GREM2Q9H772 168 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 SH2B1Q9NRF2 756 aaPredicted RBP10.82□□□□□ -0.68
SENP3-203ENST00000580231 CNNM1Q9NRU3 951 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 PDRG1Q9NUG6 133 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.82□□□□□ -0.68
SENP3-203ENST00000580231 MYH3P11055 1940 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 MROH5Q6ZUA9 1318 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 CNTNAP4Q9C0A0 1308 aa10.82□□□□□ -0.68
SENP3-203ENST00000580231 RNF113AO15541 343 aaKnown RBP10.81□□□□□ -0.68
SENP3-203ENST00000580231 TRAK2O60296 914 aa10.81□□□□□ -0.68
SENP3-203ENST00000580231 PDE8BO95263 885 aa10.81□□□□□ -0.68
SENP3-203ENST00000580231 SMCPP49901 116 aaPredicted RBP10.81□□□□□ -0.68
SENP3-203ENST00000580231 ATP2B3Q16720 1220 aa10.81□□□□□ -0.68
SENP3-203ENST00000580231 METTL24Q5JXM2 366 aa10.81□□□□□ -0.68
SENP3-203ENST00000580231 SUSD4Q5VX71 490 aa10.81□□□□□ -0.68
SENP3-203ENST00000580231 ZSCAN25Q6NSZ9 544 aa10.81□□□□□ -0.68
SENP3-203ENST00000580231 JAKMIP1Q96N16 626 aaKnown RBP10.81□□□□□ -0.68
SENP3-203ENST00000580231 UPF3BQ9BZI7 483 aaKnown RBP10.81□□□□□ -0.68
SENP3-203ENST00000580231 UBN2Q6ZU65 1347 aa10.81□□□□□ -0.68
SENP3-203ENST00000580231 GOLIM4O00461 696 aa10.8□□□□□ -0.68
SENP3-203ENST00000580231 KCNQ2O43526 872 aa10.8□□□□□ -0.68
SENP3-203ENST00000580231 BAG4O95429 457 aaKnown RBP10.8□□□□□ -0.68
SENP3-203ENST00000580231 UQCRFS1P1P0C7P4 283 aa10.8□□□□□ -0.68
SENP3-203ENST00000580231 CASTP20810 708 aaKnown RBP10.8□□□□□ -0.68
SENP3-203ENST00000580231 HMGB2P26583 209 aaKnown RBP10.8□□□□□ -0.68
SENP3-203ENST00000580231 AK2P54819 239 aa10.8□□□□□ -0.68
SENP3-203ENST00000580231 CCDC152Q4G0S7 254 aa10.8□□□□□ -0.68
SENP3-203ENST00000580231 DDX46Q7L014 1031 aaKnown RBP10.8□□□□□ -0.68
SENP3-203ENST00000580231 SYNE4Q8N205 404 aa10.8□□□□□ -0.68
SENP3-203ENST00000580231 SNIP1Q8TAD8 396 aaKnown RBP10.8□□□□□ -0.68
SENP3-203ENST00000580231 DSCC1Q9BVC3 393 aa10.8□□□□□ -0.68
SENP3-203ENST00000580231 RPAP1Q9BWH6 1393 aaPredicted RBP10.79□□□□□ -0.68
SENP3-203ENST00000580231 RPS6KA4O75676 772 aa10.79□□□□□ -0.68
SENP3-203ENST00000580231 HMGB1P09429 215 aaKnown RBP10.79□□□□□ -0.68
SENP3-203ENST00000580231 SMPD1P17405 629 aa10.79□□□□□ -0.68
SENP3-203ENST00000580231 TTF1Q15361 905 aaPredicted RBP10.79□□□□□ -0.68
SENP3-203ENST00000580231 SLC10A5Q5PT55 438 aa10.79□□□□□ -0.68
SENP3-203ENST00000580231 FAM182BQ5T319 152 aa10.79□□□□□ -0.68
SENP3-203ENST00000580231 BLOC1S2Q6QNY1 142 aa10.79□□□□□ -0.68
SENP3-203ENST00000580231 CCDC24Q8N4L8 307 aa10.79□□□□□ -0.68
SENP3-203ENST00000580231 ZGPATQ8N5A5 531 aaKnown RBP10.79□□□□□ -0.68
SENP3-203ENST00000580231 VGLL2Q8N8G2 317 aa10.79□□□□□ -0.68
SENP3-203ENST00000580231 LPIN2Q92539 896 aa10.79□□□□□ -0.68
SENP3-203ENST00000580231 EDC3Q96F86 508 aaKnown RBP10.79□□□□□ -0.68
SENP3-203ENST00000580231 MRGPRX2Q96LB1 330 aa10.79□□□□□ -0.68
SENP3-203ENST00000580231 ISY1Q9ULR0 285 aaKnown RBP10.79□□□□□ -0.68
SENP3-203ENST00000580231 NIP7Q9Y221 180 aaKnown RBP eCLIP10.79□□□□□ -0.68
SENP3-203ENST00000580231 COL5A3P25940 1745 aaPredicted RBP10.78□□□□□ -0.68
SENP3-203ENST00000580231 MYH14Q7Z406 1995 aaKnown RBP10.78□□□□□ -0.68
SENP3-203ENST00000580231 NTSR2O95665 410 aa10.78□□□□□ -0.68
SENP3-203ENST00000580231 BRD1O95696 1058 aa10.78□□□□□ -0.68
SENP3-203ENST00000580231 RPS6KB1P23443 525 aa10.78□□□□□ -0.68
SENP3-203ENST00000580231 PUM3Q15397 648 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms