RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 IREB2P48200 963 aaKnown RBP11.61□□□□□ -0.55
MSI2-209ENST00000579483 CHRNDQ07001 517 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 MYO3BQ8WXR4 1341 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 SMTNP53814 917 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 TMED8Q6PL24 325 aaPredicted RBP11.61□□□□□ -0.55
MSI2-209ENST00000579483 LRSAM1Q6UWE0 723 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 RAB11FIP4Q86YS3 637 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 CCDC117Q8IWD4 279 aaPredicted RBP11.61□□□□□ -0.55
MSI2-209ENST00000579483 PIGBQ92521 554 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 PLA2R1Q13018 1463 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 LMTK2Q8IWU2 1503 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 CIAO1O76071 339 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 DEXIO95424 95 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 PPP1R2P41236 205 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 DOK7Q18PE1 504 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 DTHD1Q6ZMT9 781 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 SMC5Q8IY18 1101 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 ATP5JP18859 108 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 NSMFQ6X4W1 530 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 IFT74Q96LB3 600 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 PSMA7O14818 248 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 PRKCSHP14314 528 aaPredicted RBP11.6□□□□□ -0.55
MSI2-209ENST00000579483 MCF2L2Q86YR7 1114 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 NARFQ9UHQ1 456 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 PCDHB15Q9Y5E8 787 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 GOLGA6L10A6NI86 522 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 SYKP43405 635 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 PPM1FP49593 454 aaPredicted RBP11.6□□□□□ -0.55
MSI2-209ENST00000579483 ATG3Q9NT62 314 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 CRB1P82279 1406 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 USP8P40818 1118 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
MSI2-209ENST00000579483 FAM182BQ5T319 152 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 RRAGBQ5VZM2 374 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 GPR108Q9NPR9 543 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 SWAP70Q9UH65 585 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 PUF60Q9UHX1 559 aaKnown RBP11.6□□□□□ -0.55
MSI2-209ENST00000579483 GRAPQ13588 217 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 ATL3Q6DD88 541 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 GRAPLQ8TC17 118 aaPredicted RBP11.6□□□□□ -0.55
MSI2-209ENST00000579483 PTPRMP28827 1452 aa11.6□□□□□ -0.55
MSI2-209ENST00000579483 NT5C2P49902 561 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 ERFEQ4G0M1 354 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 TDRD12Q587J7 1177 aaKnown RBP11.59□□□□□ -0.55
MSI2-209ENST00000579483 GADL1Q6ZQY3 521 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 CCDC125Q86Z20 511 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 TRIM47Q96LD4 638 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 SYNCQ9H7C4 482 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 ZNF532Q9HCE3 1301 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 KRT25Q7Z3Z0 450 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 CPXCR1Q8N123 301 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 ABT1Q9ULW3 272 aaKnown RBP11.59□□□□□ -0.55
MSI2-209ENST00000579483 ANGEL1Q9UNK9 670 aaKnown RBP11.59□□□□□ -0.55
MSI2-209ENST00000579483 PATL2C9JE40 543 aaKnown RBP11.59□□□□□ -0.55
MSI2-209ENST00000579483 ASIC1P78348 528 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 TXNRD1Q16881 649 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 CERKLQ49MI3 558 aaPredicted RBP11.59□□□□□ -0.55
MSI2-209ENST00000579483 FCHSD1Q86WN1 690 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 C2orf69Q8N8R5 385 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 PLVAPQ9BX97 442 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 MRPL11Q9Y3B7 192 aaKnown RBP11.59□□□□□ -0.55
MSI2-209ENST00000579483 ZSCAN12O43309 604 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 PDE8BO95263 885 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 SFPQP23246 707 aaKnown RBP eCLIP11.59□□□□□ -0.55
MSI2-209ENST00000579483 RPL13P26373 211 aaKnown RBP11.59□□□□□ -0.55
MSI2-209ENST00000579483 COA1Q9GZY4 146 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 EXOC7Q9UPT5 735 aa11.59□□□□□ -0.55
MSI2-209ENST00000579483 TCP10L2B9ZVM9 353 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 TOP1P11387 765 aaKnown RBP11.58□□□□□ -0.56
MSI2-209ENST00000579483 CTNNA2P26232 953 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 CHMLP26374 656 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 ADCY7P51828 1080 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 STX1AQ16623 288 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 IFI16Q16666 785 aaKnown RBP11.58□□□□□ -0.56
MSI2-209ENST00000579483 LRRC2Q9BYS8 371 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 DHX36Q9H2U1 1008 aaKnown RBP11.58□□□□□ -0.56
MSI2-209ENST00000579483 CROCC2H7BZ55 1655 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 ECM2O94769 699 aaPredicted RBP11.58□□□□□ -0.56
MSI2-209ENST00000579483 IGHDP01880 384 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 GBP2P32456 591 aaPredicted RBP11.58□□□□□ -0.56
MSI2-209ENST00000579483 ZAP70P43403 619 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 PLCD1P51178 756 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 KIF2AO00139 706 aaPredicted RBP11.58□□□□□ -0.56
MSI2-209ENST00000579483 MCM4P33991 863 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 CTAGE1Q96RT6 745 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 CDC42BPAQ5VT25 1732 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 PLEKHG2Q9H7P9 1386 aa11.58□□□□□ -0.56
MSI2-209ENST00000579483 SETQ01105 290 aaPredicted RBP11.58□□□□□ -0.56
MSI2-209ENST00000579483 TTC12Q9H892 705 aaPredicted RBP11.58□□□□□ -0.56
MSI2-209ENST00000579483 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
MSI2-209ENST00000579483 BICDL2A1A5D9 508 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 SLC8A3P57103 927 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 RILPL1Q5EBL4 403 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 CCDC65Q8IXS2 484 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 SLC16A10Q8TF71 515 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 PAGR1Q9BTK6 254 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 USP17L3A6NCW0 530 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 USP17L4A6NCW7 530 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms