RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 WDR66Q8TBY9 1149 aa10.73□□□□□ -0.69
CASC3-206ENST00000579238 SH3TC2Q8TF17 1288 aa10.73□□□□□ -0.69
CASC3-206ENST00000579238 PTPRCP08575 1304 aa10.73□□□□□ -0.69
CASC3-206ENST00000579238 MYCP01106 439 aaPredicted RBP10.72□□□□□ -0.69
CASC3-206ENST00000579238 SLC5A1P13866 664 aa10.72□□□□□ -0.69
CASC3-206ENST00000579238 INPP5BP32019 993 aa10.72□□□□□ -0.69
CASC3-206ENST00000579238 FXR1P51114 621 aaKnown RBP eCLIP10.72□□□□□ -0.69
CASC3-206ENST00000579238 C17orf99Q6UX52 265 aa10.72□□□□□ -0.69
CASC3-206ENST00000579238 MIGA2Q7L4E1 593 aa10.72□□□□□ -0.69
CASC3-206ENST00000579238 ANKRD23Q86SG2 305 aa10.72□□□□□ -0.69
CASC3-206ENST00000579238 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.72□□□□□ -0.69
CASC3-206ENST00000579238 FAM151AQ8WW52 585 aa10.72□□□□□ -0.69
CASC3-206ENST00000579238 LPIN2Q92539 896 aa10.72□□□□□ -0.69
CASC3-206ENST00000579238 USP44Q9H0E7 712 aa10.72□□□□□ -0.69
CASC3-206ENST00000579238 ZNF112Q9UJU3 913 aa10.72□□□□□ -0.69
CASC3-206ENST00000579238 EYA2O00167 538 aa10.71□□□□□ -0.69
CASC3-206ENST00000579238 PDHXO00330 501 aa10.71□□□□□ -0.69
CASC3-206ENST00000579238 HOXD10P28358 340 aa10.71□□□□□ -0.69
CASC3-206ENST00000579238 FAM9BQ8IZU0 186 aa10.71□□□□□ -0.69
CASC3-206ENST00000579238 ZNF521Q96K83 1311 aa10.71□□□□□ -0.69
CASC3-206ENST00000579238 SRRDQ9UH36 339 aa10.71□□□□□ -0.69
CASC3-206ENST00000579238 CPA4Q9UI42 421 aa10.71□□□□□ -0.69
CASC3-206ENST00000579238 KCNH4Q9UQ05 1017 aa10.71□□□□□ -0.69
CASC3-206ENST00000579238 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
CASC3-206ENST00000579238 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
CASC3-206ENST00000579238 ADGRA2Q96PE1 1338 aa10.7□□□□□ -0.7
CASC3-206ENST00000579238 CTGFP29279 349 aa10.7□□□□□ -0.7
CASC3-206ENST00000579238 ZEB1P37275 1124 aaPredicted RBP10.7□□□□□ -0.7
CASC3-206ENST00000579238 PSMC4P43686 418 aa10.7□□□□□ -0.7
CASC3-206ENST00000579238 RFX5P48382 616 aaPredicted RBP10.7□□□□□ -0.7
CASC3-206ENST00000579238 TCP10Q12799 353 aa10.7□□□□□ -0.7
CASC3-206ENST00000579238 NOL9Q5SY16 702 aaKnown RBP10.7□□□□□ -0.7
CASC3-206ENST00000579238 CDC42EP5Q6NZY7 148 aa10.7□□□□□ -0.7
CASC3-206ENST00000579238 TRIM47Q96LD4 638 aa10.7□□□□□ -0.7
CASC3-206ENST00000579238 ZSWIM8A7E2V4 1837 aa10.7□□□□□ -0.7
CASC3-206ENST00000579238 H0YGN5 161 aa10.69□□□□□ -0.7
CASC3-206ENST00000579238 FMNL1O95466 1100 aaPredicted RBP10.69□□□□□ -0.7
CASC3-206ENST00000579238 OSBPP22059 807 aa10.69□□□□□ -0.7
CASC3-206ENST00000579238 MOGSQ13724 837 aa10.69□□□□□ -0.7
CASC3-206ENST00000579238 MTFR1Q15390 333 aa10.69□□□□□ -0.7
CASC3-206ENST00000579238 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
CASC3-206ENST00000579238 NKX2-3Q8TAU0 364 aa10.69□□□□□ -0.7
CASC3-206ENST00000579238 RAET1EQ8TD07 263 aa10.69□□□□□ -0.7
CASC3-206ENST00000579238 FBXO3Q9UK99 471 aa10.69□□□□□ -0.7
CASC3-206ENST00000579238 MYPNQ86TC9 1320 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 CXCL11O14625 94 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 ECM2O94769 699 aaPredicted RBP10.68□□□□□ -0.7
CASC3-206ENST00000579238 LDHBP07195 334 aaKnown RBP10.68□□□□□ -0.7
CASC3-206ENST00000579238 PRDX5P30044 214 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 GRK4P32298 578 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 NFIAQ12857 509 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 ATG9AQ7Z3C6 839 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 SSH1Q8WYL5 1049 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 SHISA4Q96DD7 197 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 PARK7Q99497 189 aaKnown RBP10.68□□□□□ -0.7
CASC3-206ENST00000579238 USP40Q9NVE5 1235 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 GNL3LQ9NVN8 582 aaKnown RBP10.68□□□□□ -0.7
CASC3-206ENST00000579238 FAM198AQ9UFP1 575 aa10.68□□□□□ -0.7
CASC3-206ENST00000579238 SALL1Q9NSC2 1324 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 E9PSI1 815 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 SEMA3EO15041 775 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 ZBTB22O15209 634 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 CIAO1O76071 339 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 GJB1P08034 283 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 BCRP11274 1271 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 GJA8P48165 433 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 FCGRTP55899 365 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 ATP2B3Q16720 1220 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 GPAT2Q6NUI2 795 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 CEP126Q9P2H0 1117 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 DENND2AQ9ULE3 1009 aa10.67□□□□□ -0.7
CASC3-206ENST00000579238 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 ENTPD3O75355 529 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 CCL5P13501 91 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 UBXN2AP68543 259 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 ALDH1L2Q3SY69 923 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 FASTKD5Q7L8L6 764 aaKnown RBP10.66□□□□□ -0.7
CASC3-206ENST00000579238 UBE2Q1Q7Z7E8 422 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 ZFPM1Q8IX07 1006 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 SCYL3Q8IZE3 742 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 ZGPATQ8N5A5 531 aaKnown RBP10.66□□□□□ -0.7
CASC3-206ENST00000579238 SLAIN1Q8ND83 568 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 DPF3Q92784 378 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 IDI2Q9BXS1 227 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 SIL1Q9H173 461 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 PICK1Q9NRD5 415 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 MYH13Q9UKX3 1938 aa10.66□□□□□ -0.7
CASC3-206ENST00000579238 ATRNL1Q5VV63 1379 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 GAKO14976 1311 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 AK9Q5TCS8 1911 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 A0A0G2JLL6 359 aaPredicted RBP10.65□□□□□ -0.7
CASC3-206ENST00000579238 UBTFL1P0CB47 393 aaPredicted RBP10.65□□□□□ -0.7
CASC3-206ENST00000579238 CYP2C8P10632 490 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 IL15P40933 162 aaPredicted RBP10.65□□□□□ -0.7
CASC3-206ENST00000579238 PHKA1P46020 1223 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 RGS3P49796 1198 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 MAP3K10Q02779 954 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 PRKCZQ05513 592 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 PRRT2Q7Z6L0 340 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms