RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 API5Q9BZZ5 524 aaKnown RBP11.14□□□□□ -0.63
GGA3-207ENST00000578896 EFCC1Q9HA90 598 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 ZSWIM8A7E2V4 1837 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 KIF16BQ96L93 1317 aa11.13□□□□□ -0.63
GGA3-207ENST00000578896 IRF6O14896 467 aa11.13□□□□□ -0.63
GGA3-207ENST00000578896 SLURP2P0DP57 97 aa11.13□□□□□ -0.63
GGA3-207ENST00000578896 GTF2A2P52657 109 aa11.13□□□□□ -0.63
GGA3-207ENST00000578896 FAM83AQ86UY5 434 aa11.13□□□□□ -0.63
GGA3-207ENST00000578896 USP40Q9NVE5 1235 aa11.13□□□□□ -0.63
GGA3-207ENST00000578896 PTPN22Q9Y2R2 807 aa11.13□□□□□ -0.63
GGA3-207ENST00000578896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.13□□□□□ -0.63
GGA3-207ENST00000578896 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
GGA3-207ENST00000578896 MAST3O60307 1309 aa11.12□□□□□ -0.63
GGA3-207ENST00000578896 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
GGA3-207ENST00000578896 BTBD19C9JJ37 291 aa11.12□□□□□ -0.63
GGA3-207ENST00000578896 CIAO1O76071 339 aa11.12□□□□□ -0.63
GGA3-207ENST00000578896 SLC34A2O95436 690 aa11.12□□□□□ -0.63
GGA3-207ENST00000578896 MYCP01106 439 aaPredicted RBP11.12□□□□□ -0.63
GGA3-207ENST00000578896 LDHBP07195 334 aaKnown RBP11.12□□□□□ -0.63
GGA3-207ENST00000578896 ARHGAP39Q9C0H5 1083 aa11.12□□□□□ -0.63
GGA3-207ENST00000578896 ZFYVE28Q9HCC9 887 aa11.12□□□□□ -0.63
GGA3-207ENST00000578896 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
GGA3-207ENST00000578896 SUGT1Q9Y2Z0 365 aa11.12□□□□□ -0.63
GGA3-207ENST00000578896 BCAR3O75815 825 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 IL15P40933 162 aaPredicted RBP11.11□□□□□ -0.63
GGA3-207ENST00000578896 TFCP2Q12800 502 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 FKBP1CQ5VVH2 108 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 CCDC102BQ68D86 513 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 ERO1BQ86YB8 467 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 FAM151AQ8WW52 585 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 CLUAP1Q96AJ1 413 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 ZNF341Q9BYN7 854 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 COPRSQ9NQ92 184 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 GNL3LQ9NVN8 582 aaKnown RBP11.11□□□□□ -0.63
GGA3-207ENST00000578896 ABCF2Q9UG63 623 aa11.11□□□□□ -0.63
GGA3-207ENST00000578896 SRGAP3O43295 1099 aa11.1□□□□□ -0.63
GGA3-207ENST00000578896 CT47B1P0C2W7 299 aaPredicted RBP11.1□□□□□ -0.63
GGA3-207ENST00000578896 CETPP11597 493 aa11.1□□□□□ -0.63
GGA3-207ENST00000578896 EN2P19622 333 aaPredicted RBP11.1□□□□□ -0.63
GGA3-207ENST00000578896 RASGRF1Q13972 1273 aa11.1□□□□□ -0.63
GGA3-207ENST00000578896 DCAF15Q66K64 600 aa11.1□□□□□ -0.63
GGA3-207ENST00000578896 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.1□□□□□ -0.63
GGA3-207ENST00000578896 FRAT1Q92837 279 aaPredicted RBP11.1□□□□□ -0.63
GGA3-207ENST00000578896 DENND2AQ9ULE3 1009 aa11.1□□□□□ -0.63
GGA3-207ENST00000578896 PTCH2Q9Y6C5 1203 aa11.1□□□□□ -0.63
GGA3-207ENST00000578896 A0A1B0GUL7 405 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 CCER2I3L3R5 266 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 RGS3P49796 1198 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 PPIL2Q13356 520 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 SNAPC2Q13487 334 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 INTS3Q68E01 1043 aaKnown RBP11.09□□□□□ -0.63
GGA3-207ENST00000578896 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 XAGE2Q96GT9 111 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 NEUROD6Q96NK8 337 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
GGA3-207ENST00000578896 RPAP1Q9BWH6 1393 aaPredicted RBP11.08□□□□□ -0.64
GGA3-207ENST00000578896 PNMA6EA0A0J9YXQ4 647 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 TLR2O60603 784 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 TRIM27P14373 513 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 CTGFP29279 349 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 PPATQ06203 517 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 PICALMQ13492 652 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 PRPF38BQ5VTL8 546 aaKnown RBP11.08□□□□□ -0.64
GGA3-207ENST00000578896 PI16Q6UXB8 463 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 TBC1D9Q6ZT07 1266 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 DZIP1Q86YF9 867 aaKnown RBP11.08□□□□□ -0.64
GGA3-207ENST00000578896 SH3TC2Q8TF17 1288 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 HOOK2Q96ED9 719 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
GGA3-207ENST00000578896 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.08□□□□□ -0.64
GGA3-207ENST00000578896 ZNF112Q9UJU3 913 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 SALL1Q9NSC2 1324 aa11.08□□□□□ -0.64
GGA3-207ENST00000578896 DDTLA6NHG4 134 aaPredicted RBP11.07□□□□□ -0.64
GGA3-207ENST00000578896 PDHXO00330 501 aa11.07□□□□□ -0.64
GGA3-207ENST00000578896 SEMA3EO15041 775 aa11.07□□□□□ -0.64
GGA3-207ENST00000578896 GNAI3P08754 354 aa11.07□□□□□ -0.64
GGA3-207ENST00000578896 BTDP43251 543 aa11.07□□□□□ -0.64
GGA3-207ENST00000578896 MOGSQ13724 837 aa11.07□□□□□ -0.64
GGA3-207ENST00000578896 CCDC84Q86UT8 332 aaPredicted RBP11.07□□□□□ -0.64
GGA3-207ENST00000578896 ZSCAN29Q8IWY8 852 aaPredicted RBP11.07□□□□□ -0.64
GGA3-207ENST00000578896 ZNF384Q8TF68 577 aa11.07□□□□□ -0.64
GGA3-207ENST00000578896 ARMC5Q96C12 935 aa11.07□□□□□ -0.64
GGA3-207ENST00000578896 DOCK3Q8IZD9 2030 aa11.07□□□□□ -0.64
GGA3-207ENST00000578896 FAM196BA6NMK8 535 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 PHF20L1A8MW92 1017 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 LACTBP83111 547 aaPredicted RBP11.06□□□□□ -0.64
GGA3-207ENST00000578896 SLC9C1Q4G0N8 1177 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 C17orf99Q6UX52 265 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 ATF7IPQ6VMQ6 1270 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 ZNF333Q96JL9 665 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 HMG20BQ9P0W2 317 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 KCNH4Q9UQ05 1017 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 HDAC5Q9UQL6 1122 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 GAKO14976 1311 aa11.06□□□□□ -0.64
GGA3-207ENST00000578896 DOCK2Q92608 1830 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 WDHD1O75717 1129 aaPredicted RBP11.05□□□□□ -0.64
GGA3-207ENST00000578896 GNAI2P04899 355 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 CYP2C8P10632 490 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms