RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 PKN2Q16513 984 aaKnown RBP19.66■□□□□ 0.74
CRLF3-203ENST00000578692 CDC42EP5Q6NZY7 148 aa19.66■□□□□ 0.74
CRLF3-203ENST00000578692 ZGPATQ8N5A5 531 aaKnown RBP19.66■□□□□ 0.74
CRLF3-203ENST00000578692 NEUROD6Q96NK8 337 aa19.66■□□□□ 0.74
CRLF3-203ENST00000578692 TESPA1A2RU30 521 aaPredicted RBP19.65■□□□□ 0.74
CRLF3-203ENST00000578692 G3BP1Q13283 466 aaKnown RBP eCLIP19.65■□□□□ 0.74
CRLF3-203ENST00000578692 FAM151AQ8WW52 585 aa19.65■□□□□ 0.74
CRLF3-203ENST00000578692 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.65■□□□□ 0.74
CRLF3-203ENST00000578692 OTOFQ9HC10 1997 aa19.65■□□□□ 0.74
CRLF3-203ENST00000578692 LAMB1P07942 1786 aa19.64■□□□□ 0.73
CRLF3-203ENST00000578692 RASGRF1Q13972 1273 aa19.64■□□□□ 0.73
CRLF3-203ENST00000578692 MVPQ14764 893 aaKnown RBP19.64■□□□□ 0.73
CRLF3-203ENST00000578692 CNKSR2Q8WXI2 1034 aa19.64■□□□□ 0.73
CRLF3-203ENST00000578692 PTPN18Q99952 460 aa19.64■□□□□ 0.73
CRLF3-203ENST00000578692 USP40Q9NVE5 1235 aa19.64■□□□□ 0.73
CRLF3-203ENST00000578692 ABCF2Q9UG63 623 aa19.64■□□□□ 0.73
CRLF3-203ENST00000578692 TCP10Q12799 353 aa19.63■□□□□ 0.73
CRLF3-203ENST00000578692 DCAF15Q66K64 600 aa19.63■□□□□ 0.73
CRLF3-203ENST00000578692 MS4A4AQ96JQ5 239 aa19.63■□□□□ 0.73
CRLF3-203ENST00000578692 PDS5AQ29RF7 1337 aaKnown RBP19.63■□□□□ 0.73
CRLF3-203ENST00000578692 RPAP1Q9BWH6 1393 aaPredicted RBP19.62■□□□□ 0.73
CRLF3-203ENST00000578692 GORABQ5T7V8 394 aa19.62■□□□□ 0.73
CRLF3-203ENST00000578692 SPTY2D1Q68D10 685 aaPredicted RBP19.62■□□□□ 0.73
CRLF3-203ENST00000578692 MIGA2Q7L4E1 593 aa19.62■□□□□ 0.73
CRLF3-203ENST00000578692 FTSJ3Q8IY81 847 aaKnown RBP19.62■□□□□ 0.73
CRLF3-203ENST00000578692 ZKSCAN4Q969J2 545 aaPredicted RBP19.62■□□□□ 0.73
CRLF3-203ENST00000578692 WRNIP1Q96S55 665 aa19.62■□□□□ 0.73
CRLF3-203ENST00000578692 ZBED9Q6R2W3 1325 aa19.61■□□□□ 0.73
CRLF3-203ENST00000578692 GTF2A2P52657 109 aa19.61■□□□□ 0.73
CRLF3-203ENST00000578692 ATP8B2P98198 1209 aa19.61■□□□□ 0.73
CRLF3-203ENST00000578692 MLLT1Q03111 559 aaPredicted RBP19.61■□□□□ 0.73
CRLF3-203ENST00000578692 NFIAQ12857 509 aa19.61■□□□□ 0.73
CRLF3-203ENST00000578692 OTUD5Q96G74 571 aa19.61■□□□□ 0.73
CRLF3-203ENST00000578692 ZNF341Q9BYN7 854 aa19.61■□□□□ 0.73
CRLF3-203ENST00000578692 SPDYE5A6NIY4 337 aa19.6■□□□□ 0.73
CRLF3-203ENST00000578692 ERO1BQ86YB8 467 aa19.6■□□□□ 0.73
CRLF3-203ENST00000578692 DZIP1Q86YF9 867 aaKnown RBP19.6■□□□□ 0.73
CRLF3-203ENST00000578692 SLF2Q8IX21 1173 aa19.6■□□□□ 0.73
CRLF3-203ENST00000578692 FAM198AQ9UFP1 575 aa19.6■□□□□ 0.73
CRLF3-203ENST00000578692 HPS5Q9UPZ3 1129 aa19.6■□□□□ 0.73
CRLF3-203ENST00000578692 SNCAIPQ9Y6H5 919 aa19.6■□□□□ 0.73
CRLF3-203ENST00000578692 CCL15-CCL14A0A0B4J2E2 113 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 ZBTB7BO15156 539 aaPredicted RBP19.59■□□□□ 0.73
CRLF3-203ENST00000578692 CRHR2Q13324 411 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 POLA2Q14181 598 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 CCL15Q16663 113 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 ERICH6Q7L0X2 663 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 SSH3Q8TE77 659 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 BRI3BPQ8WY22 251 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 FAM163AQ96GL9 167 aaPredicted RBP19.59■□□□□ 0.73
CRLF3-203ENST00000578692 AK9Q5TCS8 1911 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 MYH2Q9UKX2 1941 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 GAKO14976 1311 aa19.59■□□□□ 0.73
CRLF3-203ENST00000578692 FBXO46Q6PJ61 603 aaPredicted RBP19.58■□□□□ 0.73
CRLF3-203ENST00000578692 ITPRIPQ8IWB1 547 aa19.58■□□□□ 0.73
CRLF3-203ENST00000578692 IDI2Q9BXS1 227 aa19.58■□□□□ 0.73
CRLF3-203ENST00000578692 HMG20BQ9P0W2 317 aa19.58■□□□□ 0.73
CRLF3-203ENST00000578692 RLBP1P12271 317 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 ZFPM1Q8IX07 1006 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 SPATA5Q8NB90 893 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 C1orf115Q9H7X2 142 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 ZNF112Q9UJU3 913 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 ENTPD3O75355 529 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 SURF6O75683 361 aaKnown RBP19.57■□□□□ 0.72
CRLF3-203ENST00000578692 CETPP11597 493 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 ARID4AP29374 1257 aaPredicted RBP19.57■□□□□ 0.72
CRLF3-203ENST00000578692 INPP5BP32019 993 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 RGS3P49796 1198 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 MECOMQ03112 1051 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 OS9Q13438 667 aaPredicted RBP19.57■□□□□ 0.72
CRLF3-203ENST00000578692 GPR108Q9NPR9 543 aa19.57■□□□□ 0.72
CRLF3-203ENST00000578692 IRF6O14896 467 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 UQCRFS1P1P0C7P4 283 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 BTDP43251 543 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 SOX10P56693 466 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 SP3Q02447 781 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 PPATQ06203 517 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 PPIL2Q13356 520 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 TAF1CQ15572 869 aaPredicted RBP19.56■□□□□ 0.72
CRLF3-203ENST00000578692 PI16Q6UXB8 463 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 TBC1D9Q6ZT07 1266 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 ERO1AQ96HE7 468 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 ZFYVE28Q9HCC9 887 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 TRIM17Q9Y577 477 aa19.56■□□□□ 0.72
CRLF3-203ENST00000578692 MROH7-TTC4A0A0A0MT08 1334 aa19.55■□□□□ 0.72
CRLF3-203ENST00000578692 LDHCP07864 332 aa19.55■□□□□ 0.72
CRLF3-203ENST00000578692 SNAPC2Q13487 334 aa19.55■□□□□ 0.72
CRLF3-203ENST00000578692 OTOP1Q7RTM1 612 aa19.55■□□□□ 0.72
CRLF3-203ENST00000578692 FAM43AQ8N2R8 423 aa19.55■□□□□ 0.72
CRLF3-203ENST00000578692 GPR75-ASB3A0A0A6YYF3 556 aa19.54■□□□□ 0.72
CRLF3-203ENST00000578692 MCAMP43121 646 aa19.54■□□□□ 0.72
CRLF3-203ENST00000578692 TNNI3KQ59H18 835 aa19.54■□□□□ 0.72
CRLF3-203ENST00000578692 ZSCAN29Q8IWY8 852 aaPredicted RBP19.54■□□□□ 0.72
CRLF3-203ENST00000578692 CD99L2Q8TCZ2 262 aa19.54■□□□□ 0.72
CRLF3-203ENST00000578692 ZNF384Q8TF68 577 aa19.54■□□□□ 0.72
CRLF3-203ENST00000578692 NSUN4Q96CB9 384 aaKnown RBP19.54■□□□□ 0.72
CRLF3-203ENST00000578692 FPGT-TNNI3KV9GXZ4 949 aa19.54■□□□□ 0.72
CRLF3-203ENST00000578692 WDHD1O75717 1129 aaPredicted RBP19.53■□□□□ 0.72
CRLF3-203ENST00000578692 GSTO1P78417 241 aa19.53■□□□□ 0.72
CRLF3-203ENST00000578692 CCDC158Q5M9N0 1113 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms