RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 PODXL2Q9NZ53 605 aa20.1■□□□□ 0.81
SREBF1-218ENST00000578469 CLEC11AQ9Y240 323 aa20.1■□□□□ 0.81
SREBF1-218ENST00000578469 IRS2Q9Y4H2 1338 aa20.09■□□□□ 0.81
SREBF1-218ENST00000578469 ZNF213O14771 459 aa20.09■□□□□ 0.81
SREBF1-218ENST00000578469 UFL1O94874 794 aa20.09■□□□□ 0.81
SREBF1-218ENST00000578469 MBD4O95243 580 aa20.09■□□□□ 0.81
SREBF1-218ENST00000578469 ALX1Q15699 326 aa20.09■□□□□ 0.81
SREBF1-218ENST00000578469 PNMA8AQ86V59 439 aaPredicted RBP20.09■□□□□ 0.81
SREBF1-218ENST00000578469 C7orf43Q8WVR3 580 aa20.09■□□□□ 0.81
SREBF1-218ENST00000578469 ZNF277Q9NRM2 450 aaPredicted RBP20.09■□□□□ 0.81
SREBF1-218ENST00000578469 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.09■□□□□ 0.81
SREBF1-218ENST00000578469 TAF6LQ9Y6J9 622 aa20.09■□□□□ 0.81
SREBF1-218ENST00000578469 PATL2C9JE40 543 aaKnown RBP20.08■□□□□ 0.81
SREBF1-218ENST00000578469 E7EWF7 191 aa20.08■□□□□ 0.81
SREBF1-218ENST00000578469 CHAF1AQ13111 956 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-218ENST00000578469 RAB3GAP1Q15042 981 aa20.08■□□□□ 0.81
SREBF1-218ENST00000578469 DHX32Q7L7V1 743 aaKnown RBP20.08■□□□□ 0.81
SREBF1-218ENST00000578469 WDR66Q8TBY9 1149 aa20.08■□□□□ 0.81
SREBF1-218ENST00000578469 NACAP1Q9BZK3 213 aa20.08■□□□□ 0.81
SREBF1-218ENST00000578469 ATP6V0A2Q9Y487 856 aa20.08■□□□□ 0.81
SREBF1-218ENST00000578469 ZNF541Q9H0D2 1346 aa20.07■□□□□ 0.8
SREBF1-218ENST00000578469 COL1A1P02452 1464 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-218ENST00000578469 EPHX2P34913 555 aa20.07■□□□□ 0.8
SREBF1-218ENST00000578469 VEGFBP49765 207 aa20.07■□□□□ 0.8
SREBF1-218ENST00000578469 FGD1P98174 961 aa20.07■□□□□ 0.8
SREBF1-218ENST00000578469 TTLL5Q6EMB2 1281 aa20.07■□□□□ 0.8
SREBF1-218ENST00000578469 NAA16Q6N069 864 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-218ENST00000578469 MYO5AQ9Y4I1 1855 aaKnown RBP20.07■□□□□ 0.8
SREBF1-218ENST00000578469 ZMYM6O95789 1325 aa20.06■□□□□ 0.8
SREBF1-218ENST00000578469 MAGEB6P1A0A0J9YX57 407 aa20.06■□□□□ 0.8
SREBF1-218ENST00000578469 FOXP2O15409 715 aa20.06■□□□□ 0.8
SREBF1-218ENST00000578469 STOX1Q6ZVD7 989 aa20.06■□□□□ 0.8
SREBF1-218ENST00000578469 TXNRD3Q86VQ6 643 aa20.06■□□□□ 0.8
SREBF1-218ENST00000578469 TDRD7Q8NHU6 1098 aaKnown RBP20.06■□□□□ 0.8
SREBF1-218ENST00000578469 ARMT1Q9H993 441 aa20.06■□□□□ 0.8
SREBF1-218ENST00000578469 C6orf229H3BNL8 230 aa20.05■□□□□ 0.8
SREBF1-218ENST00000578469 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
SREBF1-218ENST00000578469 TBC1D16Q8TBP0 767 aa20.05■□□□□ 0.8
SREBF1-218ENST00000578469 JDP2Q8WYK2 163 aa20.05■□□□□ 0.8
SREBF1-218ENST00000578469 GBP4Q96PP9 640 aa20.05■□□□□ 0.8
SREBF1-218ENST00000578469 NAPBQ9H115 298 aa20.05■□□□□ 0.8
SREBF1-218ENST00000578469 SLC4A4Q9Y6R1 1079 aa20.05■□□□□ 0.8
SREBF1-218ENST00000578469 SALL1Q9NSC2 1324 aa20.04■□□□□ 0.8
SREBF1-218ENST00000578469 ITGBL1O95965 494 aaPredicted RBP20.04■□□□□ 0.8
SREBF1-218ENST00000578469 TRDNQ13061 729 aa20.04■□□□□ 0.8
SREBF1-218ENST00000578469 Q6ZUG5 572 aa20.04■□□□□ 0.8
SREBF1-218ENST00000578469 RALYLQ86SE5 291 aaKnown RBP20.04■□□□□ 0.8
SREBF1-218ENST00000578469 IFNL3Q8IZI9 196 aa20.04■□□□□ 0.8
SREBF1-218ENST00000578469 GPC2Q8N158 579 aa20.04■□□□□ 0.8
SREBF1-218ENST00000578469 NCOA7Q8NI08 942 aa20.04■□□□□ 0.8
SREBF1-218ENST00000578469 ADAMTSL1Q8N6G6 1762 aa20.03■□□□□ 0.8
SREBF1-218ENST00000578469 HAND2P61296 217 aa20.03■□□□□ 0.8
SREBF1-218ENST00000578469 LCORLQ8N3X6 602 aa20.03■□□□□ 0.8
SREBF1-218ENST00000578469 MIGA1Q8NAN2 632 aa20.03■□□□□ 0.8
SREBF1-218ENST00000578469 TNPO1Q92973 898 aaKnown RBP20.03■□□□□ 0.8
SREBF1-218ENST00000578469 TCEANC2Q96MN5 208 aa20.03■□□□□ 0.8
SREBF1-218ENST00000578469 LARP6Q9BRS8 491 aaKnown RBP20.03■□□□□ 0.8
SREBF1-218ENST00000578469 CD209Q9NNX6 404 aa20.03■□□□□ 0.8
SREBF1-218ENST00000578469 SMC3Q9UQE7 1217 aa20.03■□□□□ 0.8
SREBF1-218ENST00000578469 MYH13Q9UKX3 1938 aa20.03■□□□□ 0.8
SREBF1-218ENST00000578469 LRRC37AA6NMS7 1700 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 RASSF10A6NK89 507 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 FZD9O00144 591 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 LMOD1P29536 600 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-218ENST00000578469 TDO2P48775 406 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 GSTO1P78417 241 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 EXOSC10Q01780 885 aaKnown RBP20.02■□□□□ 0.8
SREBF1-218ENST00000578469 TOB2Q14106 344 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-218ENST00000578469 DEFB115Q30KQ5 88 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 DZIP1Q86YF9 867 aaKnown RBP20.02■□□□□ 0.8
SREBF1-218ENST00000578469 MPNDQ8N594 471 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 NSUN4Q96CB9 384 aaKnown RBP20.02■□□□□ 0.8
SREBF1-218ENST00000578469 CHMP4CQ96CF2 233 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 WBP1LQ9NX94 342 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 TPCN1Q9ULQ1 816 aa20.02■□□□□ 0.8
SREBF1-218ENST00000578469 ABT1Q9ULW3 272 aaKnown RBP20.02■□□□□ 0.8
SREBF1-218ENST00000578469 GSG1L2A8MUP6 293 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 LDHBP07195 334 aaKnown RBP20.01■□□□□ 0.79
SREBF1-218ENST00000578469 IL1R1P14778 569 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 MCM5P33992 734 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 EIF6P56537 245 aaKnown RBP20.01■□□□□ 0.79
SREBF1-218ENST00000578469 MAP2K1Q02750 393 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-218ENST00000578469 MECOMQ03112 1051 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 ME3Q16798 604 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 CC2D2BQ6DHV5 1058 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 OLFM4Q6UX06 510 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 CCDC83Q8IWF9 413 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 GPR101Q96P66 508 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-218ENST00000578469 PSMD1Q99460 953 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 POLLQ9UGP5 575 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 WDR19Q8NEZ3 1342 aa20.01■□□□□ 0.79
SREBF1-218ENST00000578469 LARGE1O95461 756 aa20■□□□□ 0.79
SREBF1-218ENST00000578469 MCM4P33991 863 aa20■□□□□ 0.79
SREBF1-218ENST00000578469 LBX1P52954 281 aa20■□□□□ 0.79
SREBF1-218ENST00000578469 MAP1SQ66K74 1059 aaPredicted RBP20■□□□□ 0.79
SREBF1-218ENST00000578469 DPP8Q6V1X1 898 aaPredicted RBP20■□□□□ 0.79
SREBF1-218ENST00000578469 DUOX1Q9NRD9 1551 aa20■□□□□ 0.79
SREBF1-218ENST00000578469 LDHCP07864 332 aa19.99■□□□□ 0.79
SREBF1-218ENST00000578469 PTMSP20962 102 aa19.99■□□□□ 0.79
SREBF1-218ENST00000578469 GRIPAP1Q4V328 841 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms