RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 NEUROD6Q96NK8 337 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 NBPF3Q9H094 633 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 CCDC8Q9H0W5 538 aaPredicted RBP9.78□□□□□ -0.84
COPS3-215ENST00000578317 NSFL1CQ9UNZ2 370 aaKnown RBP9.78□□□□□ -0.84
COPS3-215ENST00000578317 ZNF804BA4D1E1 1349 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 TNRC6CQ9HCJ0 1690 aaKnown RBP9.78□□□□□ -0.84
COPS3-215ENST00000578317 ERC2O15083 957 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 GLRX3O76003 335 aaKnown RBP9.78□□□□□ -0.84
COPS3-215ENST00000578317 ATP5JP18859 108 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 GPSM2P81274 684 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 SOGA3Q5TF21 947 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.78□□□□□ -0.84
COPS3-215ENST00000578317 DBNDD2Q9BQY9 259 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 RTFDC1Q9BY42 306 aaPredicted RBP9.78□□□□□ -0.84
COPS3-215ENST00000578317 ANKIB1Q9P2G1 1089 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 MOXD2PA6NHM9 499 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 DALRD3Q5D0E6 543 aaKnown RBP9.77□□□□□ -0.85
COPS3-215ENST00000578317 CCDC158Q5M9N0 1113 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 FBXO33Q7Z6M2 555 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 RTKN2Q8IZC4 609 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 MPNDQ8N594 471 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 MTMR14Q8NCE2 650 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 TBC1D16Q8TBP0 767 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 PI4K2BQ8TCG2 481 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 GGA1Q9UJY5 639 aa9.77□□□□□ -0.85
COPS3-215ENST00000578317 IRS2Q9Y4H2 1338 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 SNAP23O00161 211 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 KCNJ4P48050 445 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 RGS3P49796 1198 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 CSPP1Q1MSJ5 1256 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 CAVIN4Q5BKX8 364 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 BMP2KLQ5H9B9 411 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 CCDC102BQ68D86 513 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 SAMD7Q7Z3H4 446 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 SKAP1Q86WV1 359 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 TICAM2Q86XR7 235 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 FAM84BQ96KN1 310 aaPredicted RBP9.76□□□□□ -0.85
COPS3-215ENST00000578317 ZFRQ96KR1 1074 aaKnown RBP9.76□□□□□ -0.85
COPS3-215ENST00000578317 VPS33BQ9H267 617 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 TLR7Q9NYK1 1049 aaKnown RBP9.76□□□□□ -0.85
COPS3-215ENST00000578317 PPP1R1BQ9UD71 204 aaPredicted RBP9.76□□□□□ -0.85
COPS3-215ENST00000578317 POLLQ9UGP5 575 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 ZNF609O15014 1411 aa9.76□□□□□ -0.85
COPS3-215ENST00000578317 MYH3P11055 1940 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 COL4A1P02462 1669 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 WTIPA6NIX2 430 aaPredicted RBP9.75□□□□□ -0.85
COPS3-215ENST00000578317 SLC10A3P09131 477 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 UQCRFS1P1P0C7P4 283 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 ADORA1P30542 326 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 GORABQ5T7V8 394 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 DPP8Q6V1X1 898 aaPredicted RBP9.75□□□□□ -0.85
COPS3-215ENST00000578317 SYT17Q9BSW7 474 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 FHDC1Q9C0D6 1143 aaPredicted RBP9.75□□□□□ -0.85
COPS3-215ENST00000578317 PRM3Q9NNZ6 103 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 KIAA1551Q9HCM1 1747 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 ANKRD31Q8N7Z5 1873 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 KIF13BQ9NQT8 1826 aa9.75□□□□□ -0.85
COPS3-215ENST00000578317 C21orf2O43822 256 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 UFL1O94874 794 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 ARID4AP29374 1257 aaPredicted RBP9.74□□□□□ -0.85
COPS3-215ENST00000578317 HIBADHP31937 336 aaKnown RBP9.74□□□□□ -0.85
COPS3-215ENST00000578317 CCDC93Q567U6 631 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 TTC22Q5TAA0 569 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 SUPT20HQ8NEM7 779 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 PSMD1Q99460 953 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 HAUS7Q99871 368 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 GNL3LQ9NVN8 582 aaKnown RBP9.74□□□□□ -0.85
COPS3-215ENST00000578317 SNED1Q8TER0 1413 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 C6orf229H3BNL8 230 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 LILRB3O75022 631 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 IGSF3O75054 1194 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 BCAMP50895 628 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 QPCTQ16769 361 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 OLFM4Q6UX06 510 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 CDAN1Q8IWY9 1227 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 NLGN2Q8NFZ4 835 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 EYA3Q99504 573 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 ZC3H12CQ9C0D7 883 aaKnown RBP9.74□□□□□ -0.85
COPS3-215ENST00000578317 BCL11AQ9H165 835 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 GDPD2Q9HCC8 539 aa9.74□□□□□ -0.85
COPS3-215ENST00000578317 MED23Q9ULK4 1368 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 IL1R1P14778 569 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 GSPT1P15170 499 aaKnown RBP9.73□□□□□ -0.85
COPS3-215ENST00000578317 NDUFV2P19404 249 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 PHKA1P46020 1223 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 WASHC4Q2M389 1173 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 TTC39AQ5SRH9 613 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 SLC51AQ86UW1 340 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 TXNRD3Q86VQ6 643 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 RDH13Q8NBN7 331 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 BOLA2Q9H3K6 86 aa9.73□□□□□ -0.85
COPS3-215ENST00000578317 COL11A2P13942 1736 aaPredicted RBP9.73□□□□□ -0.85
COPS3-215ENST00000578317 PDS5AQ29RF7 1337 aaKnown RBP9.72□□□□□ -0.85
COPS3-215ENST00000578317 SDSP20132 328 aa9.72□□□□□ -0.85
COPS3-215ENST00000578317 KLRK1P26718 216 aa9.72□□□□□ -0.85
COPS3-215ENST00000578317 GYG1P46976 350 aa9.72□□□□□ -0.85
COPS3-215ENST00000578317 FKBP4Q02790 459 aaKnown RBP eCLIP9.72□□□□□ -0.85
COPS3-215ENST00000578317 TSHZ3Q63HK5 1081 aa9.72□□□□□ -0.85
COPS3-215ENST00000578317 ZNF804AQ7Z570 1209 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms