RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
UPF3AP2-202ENST00000578315 DPF3Q92784 378 aa17.1■□□□□ 0.33
UPF3AP2-202ENST00000578315 HOOK2Q96ED9 719 aa17.1■□□□□ 0.33
UPF3AP2-202ENST00000578315 TRIM47Q96LD4 638 aa17.1■□□□□ 0.33
UPF3AP2-202ENST00000578315 UTYO14607 1347 aa17.1■□□□□ 0.33
UPF3AP2-202ENST00000578315 PDHXO00330 501 aa17.09■□□□□ 0.33
UPF3AP2-202ENST00000578315 FMNL1O95466 1100 aaPredicted RBP17.09■□□□□ 0.33
UPF3AP2-202ENST00000578315 GNRH1P01148 92 aa17.09■□□□□ 0.33
UPF3AP2-202ENST00000578315 FKBP1CQ5VVH2 108 aa17.09■□□□□ 0.33
UPF3AP2-202ENST00000578315 SHISA4Q96DD7 197 aa17.09■□□□□ 0.33
UPF3AP2-202ENST00000578315 MRIQ9BWK5 157 aa17.09■□□□□ 0.33
UPF3AP2-202ENST00000578315 SRRDQ9UH36 339 aa17.09■□□□□ 0.33
UPF3AP2-202ENST00000578315 MAST3O60307 1309 aa17.09■□□□□ 0.33
UPF3AP2-202ENST00000578315 OSBPP22059 807 aa17.08■□□□□ 0.32
UPF3AP2-202ENST00000578315 PRMT2P55345 433 aa17.08■□□□□ 0.32
UPF3AP2-202ENST00000578315 HHIPL2Q6UWX4 724 aa17.08■□□□□ 0.32
UPF3AP2-202ENST00000578315 ANKRD23Q86SG2 305 aa17.08■□□□□ 0.32
UPF3AP2-202ENST00000578315 RAET1EQ8TD07 263 aa17.08■□□□□ 0.32
UPF3AP2-202ENST00000578315 IFIT1P09914 478 aaKnown RBP17.07■□□□□ 0.32
UPF3AP2-202ENST00000578315 PUM3Q15397 648 aaKnown RBP17.07■□□□□ 0.32
UPF3AP2-202ENST00000578315 DIXDC1Q155Q3 683 aa17.07■□□□□ 0.32
UPF3AP2-202ENST00000578315 FAM151AQ8WW52 585 aa17.07■□□□□ 0.32
UPF3AP2-202ENST00000578315 BIN2Q9UBW5 565 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP2-202ENST00000578315 SUGT1Q9Y2Z0 365 aa17.07■□□□□ 0.32
UPF3AP2-202ENST00000578315 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
UPF3AP2-202ENST00000578315 MYPNQ86TC9 1320 aa17.06■□□□□ 0.32
UPF3AP2-202ENST00000578315 FGFR2P21802 821 aa17.06■□□□□ 0.32
UPF3AP2-202ENST00000578315 HOXD10P28358 340 aa17.06■□□□□ 0.32
UPF3AP2-202ENST00000578315 GRK4P32298 578 aa17.06■□□□□ 0.32
UPF3AP2-202ENST00000578315 NFIAQ12857 509 aa17.06■□□□□ 0.32
UPF3AP2-202ENST00000578315 CDC42EP5Q6NZY7 148 aa17.06■□□□□ 0.32
UPF3AP2-202ENST00000578315 DAGLAQ9Y4D2 1042 aa17.06■□□□□ 0.32
UPF3AP2-202ENST00000578315 CEP290O15078 2479 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 ADGRA2Q96PE1 1338 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 CYP2C8P10632 490 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 CCL5P13501 91 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 ZEB1P37275 1124 aaPredicted RBP17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 MOGSQ13724 837 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 RBM27Q9P2N5 1060 aaKnown RBP17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 ZNF112Q9UJU3 913 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 KCNH4Q9UQ05 1017 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 AK9Q5TCS8 1911 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 SZT2Q5T011 3432 aa17.05■□□□□ 0.32
UPF3AP2-202ENST00000578315 SLC5A1P13866 664 aa17.04■□□□□ 0.32
UPF3AP2-202ENST00000578315 PRKCZQ05513 592 aa17.04■□□□□ 0.32
UPF3AP2-202ENST00000578315 ZFPM1Q8IX07 1006 aa17.04■□□□□ 0.32
UPF3AP2-202ENST00000578315 FAM9BQ8IZU0 186 aa17.04■□□□□ 0.32
UPF3AP2-202ENST00000578315 MRPL50Q8N5N7 158 aaKnown RBP17.04■□□□□ 0.32
UPF3AP2-202ENST00000578315 RNF208Q9H0X6 261 aa17.04■□□□□ 0.32
UPF3AP2-202ENST00000578315 TRIOBPQ9H2D6 2365 aa17.03■□□□□ 0.32
UPF3AP2-202ENST00000578315 PRDX5P30044 214 aa17.03■□□□□ 0.32
UPF3AP2-202ENST00000578315 NKX2-3Q8TAU0 364 aa17.03■□□□□ 0.32
UPF3AP2-202ENST00000578315 USP44Q9H0E7 712 aa17.03■□□□□ 0.32
UPF3AP2-202ENST00000578315 USP40Q9NVE5 1235 aa17.03■□□□□ 0.32
UPF3AP2-202ENST00000578315 FAM198AQ9UFP1 575 aa17.03■□□□□ 0.32
UPF3AP2-202ENST00000578315 MYH13Q9UKX3 1938 aa17.03■□□□□ 0.32
UPF3AP2-202ENST00000578315 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
UPF3AP2-202ENST00000578315 EYA2O00167 538 aa17.02■□□□□ 0.32
UPF3AP2-202ENST00000578315 ANP32CO43423 234 aa17.02■□□□□ 0.32
UPF3AP2-202ENST00000578315 GJB1P08034 283 aa17.02■□□□□ 0.32
UPF3AP2-202ENST00000578315 GJA8P48165 433 aa17.02■□□□□ 0.32
UPF3AP2-202ENST00000578315 GPAT2Q6NUI2 795 aa17.02■□□□□ 0.32
UPF3AP2-202ENST00000578315 LPIN2Q92539 896 aa17.02■□□□□ 0.32
UPF3AP2-202ENST00000578315 PARK7Q99497 189 aaKnown RBP17.02■□□□□ 0.32
UPF3AP2-202ENST00000578315 GABRQQ9UN88 632 aa17.02■□□□□ 0.32
UPF3AP2-202ENST00000578315 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
UPF3AP2-202ENST00000578315 FCGRTP55899 365 aa17.01■□□□□ 0.31
UPF3AP2-202ENST00000578315 UBXN2AP68543 259 aa17.01■□□□□ 0.31
UPF3AP2-202ENST00000578315 NOL9Q5SY16 702 aaKnown RBP17.01■□□□□ 0.31
UPF3AP2-202ENST00000578315 SIL1Q9H173 461 aa17.01■□□□□ 0.31
UPF3AP2-202ENST00000578315 ZHX2Q9Y6X8 837 aa17.01■□□□□ 0.31
UPF3AP2-202ENST00000578315 LDHBP07195 334 aaKnown RBP17■□□□□ 0.31
UPF3AP2-202ENST00000578315 SLURP2P0DP57 97 aa17■□□□□ 0.31
UPF3AP2-202ENST00000578315 BCRP11274 1271 aa17■□□□□ 0.31
UPF3AP2-202ENST00000578315 GADL1Q6ZQY3 521 aa17■□□□□ 0.31
UPF3AP2-202ENST00000578315 UBE2Q1Q7Z7E8 422 aa17■□□□□ 0.31
UPF3AP2-202ENST00000578315 U2AF1L4Q8WU68 220 aaKnown RBP17■□□□□ 0.31
UPF3AP2-202ENST00000578315 HTATIP2Q9BUP3 242 aa17■□□□□ 0.31
UPF3AP2-202ENST00000578315 UNC93B1Q9H1C4 597 aa17■□□□□ 0.31
UPF3AP2-202ENST00000578315 PTPRCP08575 1304 aa16.99■□□□□ 0.31
UPF3AP2-202ENST00000578315 CXCL11O14625 94 aa16.99■□□□□ 0.31
UPF3AP2-202ENST00000578315 ELNP15502 786 aa16.99■□□□□ 0.31
UPF3AP2-202ENST00000578315 ATG9AQ7Z3C6 839 aa16.99■□□□□ 0.31
UPF3AP2-202ENST00000578315 RANBP2P49792 3224 aaKnown RBP16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 PHF20L1A8MW92 1017 aa16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 ADCY3O60266 1144 aa16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 FARP2O94887 1054 aaPredicted RBP16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 RGS3P49796 1198 aa16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 ATP2B3Q16720 1220 aa16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 SLAIN1Q8ND83 568 aa16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 SSH1Q8WYL5 1049 aa16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 PICK1Q9NRD5 415 aa16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 MGAMO43451 1857 aa16.98■□□□□ 0.31
UPF3AP2-202ENST00000578315 A0A0G2JLL6 359 aaPredicted RBP16.97■□□□□ 0.31
UPF3AP2-202ENST00000578315 PHKA1P46020 1223 aa16.97■□□□□ 0.31
UPF3AP2-202ENST00000578315 FLT3LGP49771 235 aa16.97■□□□□ 0.31
UPF3AP2-202ENST00000578315 FASTKD5Q7L8L6 764 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms