RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 HOOK2Q96ED9 719 aa15.76■□□□□ 0.11
CCDC57-211ENST00000578187 WNK4Q96J92 1243 aa15.76■□□□□ 0.11
CCDC57-211ENST00000578187 CFHR5Q9BXR6 569 aa15.76■□□□□ 0.11
CCDC57-211ENST00000578187 GNL3LQ9NVN8 582 aaKnown RBP15.76■□□□□ 0.11
CCDC57-211ENST00000578187 FZD1Q9UP38 647 aa15.76■□□□□ 0.11
CCDC57-211ENST00000578187 AKAP2Q9Y2D5 859 aa15.76■□□□□ 0.11
CCDC57-211ENST00000578187 FKTNO75072 461 aa15.75■□□□□ 0.11
CCDC57-211ENST00000578187 SURF6O75683 361 aaKnown RBP15.75■□□□□ 0.11
CCDC57-211ENST00000578187 SIRT2Q8IXJ6 389 aa15.75■□□□□ 0.11
CCDC57-211ENST00000578187 WDR66Q8TBY9 1149 aa15.75■□□□□ 0.11
CCDC57-211ENST00000578187 USP2O75604 605 aaPredicted RBP15.74■□□□□ 0.11
CCDC57-211ENST00000578187 ADORA1P30542 326 aa15.74■□□□□ 0.11
CCDC57-211ENST00000578187 IFNL1Q8IU54 200 aa15.74■□□□□ 0.11
CCDC57-211ENST00000578187 CLMNQ96JQ2 1002 aa15.74■□□□□ 0.11
CCDC57-211ENST00000578187 MRIQ9BWK5 157 aa15.74■□□□□ 0.11
CCDC57-211ENST00000578187 GPR108Q9NPR9 543 aa15.74■□□□□ 0.11
CCDC57-211ENST00000578187 CSADQ9Y600 493 aa15.74■□□□□ 0.11
CCDC57-211ENST00000578187 LAMB1P07942 1786 aa15.73■□□□□ 0.11
CCDC57-211ENST00000578187 HMMRO75330 724 aa15.73■□□□□ 0.11
CCDC57-211ENST00000578187 TIMM10P62072 90 aa15.73■□□□□ 0.11
CCDC57-211ENST00000578187 OS9Q13438 667 aaPredicted RBP15.73■□□□□ 0.11
CCDC57-211ENST00000578187 XAGE2Q96GT9 111 aa15.73■□□□□ 0.11
CCDC57-211ENST00000578187 ZDHHC15Q96MV8 337 aa15.73■□□□□ 0.11
CCDC57-211ENST00000578187 AOX1Q06278 1338 aa15.72■□□□□ 0.11
CCDC57-211ENST00000578187 SEMA3EO15041 775 aa15.72■□□□□ 0.11
CCDC57-211ENST00000578187 PHKA1P46020 1223 aa15.72■□□□□ 0.11
CCDC57-211ENST00000578187 CCDC102BQ68D86 513 aa15.72■□□□□ 0.11
CCDC57-211ENST00000578187 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
CCDC57-211ENST00000578187 TMEM39BQ9GZU3 492 aa15.72■□□□□ 0.11
CCDC57-211ENST00000578187 ELP3Q9H9T3 547 aa15.72■□□□□ 0.11
CCDC57-211ENST00000578187 PDS5AQ29RF7 1337 aaKnown RBP15.71■□□□□ 0.11
CCDC57-211ENST00000578187 WDHD1O75717 1129 aaPredicted RBP15.71■□□□□ 0.11
CCDC57-211ENST00000578187 TNNI3KQ59H18 835 aa15.71■□□□□ 0.11
CCDC57-211ENST00000578187 FKBP1CQ5VVH2 108 aa15.71■□□□□ 0.11
CCDC57-211ENST00000578187 HHIPL2Q6UWX4 724 aa15.71■□□□□ 0.11
CCDC57-211ENST00000578187 FAM83AQ86UY5 434 aa15.71■□□□□ 0.11
CCDC57-211ENST00000578187 ERC1Q8IUD2 1116 aa15.71■□□□□ 0.11
CCDC57-211ENST00000578187 HPS5Q9UPZ3 1129 aa15.71■□□□□ 0.11
CCDC57-211ENST00000578187 EXOC6BQ9Y2D4 811 aa15.71■□□□□ 0.11
CCDC57-211ENST00000578187 FPGT-TNNI3KV9GXZ4 949 aa15.71■□□□□ 0.11
CCDC57-211ENST00000578187 MAST2Q6P0Q8 1798 aa15.71■□□□□ 0.11
CCDC57-211ENST00000578187 OTOFQ9HC10 1997 aa15.71■□□□□ 0.1
CCDC57-211ENST00000578187 MAP3K9P80192 1104 aa15.7■□□□□ 0.1
CCDC57-211ENST00000578187 GRIK5Q16478 980 aa15.7■□□□□ 0.1
CCDC57-211ENST00000578187 HSP90AB4PQ58FF6 505 aa15.7■□□□□ 0.1
CCDC57-211ENST00000578187 DCAF15Q66K64 600 aa15.7■□□□□ 0.1
CCDC57-211ENST00000578187 FBXO46Q6PJ61 603 aaPredicted RBP15.7■□□□□ 0.1
CCDC57-211ENST00000578187 ZGPATQ8N5A5 531 aaKnown RBP15.7■□□□□ 0.1
CCDC57-211ENST00000578187 TEPSINQ96N21 525 aa15.7■□□□□ 0.1
CCDC57-211ENST00000578187 NEUROD6Q96NK8 337 aa15.7■□□□□ 0.1
CCDC57-211ENST00000578187 DENND2AQ9ULE3 1009 aa15.7■□□□□ 0.1
CCDC57-211ENST00000578187 SALL1Q9NSC2 1324 aa15.69■□□□□ 0.1
CCDC57-211ENST00000578187 LDHBP07195 334 aaKnown RBP15.69■□□□□ 0.1
CCDC57-211ENST00000578187 GTF2A2P52657 109 aa15.69■□□□□ 0.1
CCDC57-211ENST00000578187 CACNB3P54284 484 aa15.69■□□□□ 0.1
CCDC57-211ENST00000578187 SOX10P56693 466 aa15.69■□□□□ 0.1
CCDC57-211ENST00000578187 ERO1AQ96HE7 468 aa15.69■□□□□ 0.1
CCDC57-211ENST00000578187 CRBNQ96SW2 442 aa15.69■□□□□ 0.1
CCDC57-211ENST00000578187 MYH2Q9UKX2 1941 aa15.68■□□□□ 0.1
CCDC57-211ENST00000578187 MYO5AQ9Y4I1 1855 aaKnown RBP15.68■□□□□ 0.1
CCDC57-211ENST00000578187 RPAP1Q9BWH6 1393 aaPredicted RBP15.68■□□□□ 0.1
CCDC57-211ENST00000578187 IGF2BP3O00425 579 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCDC57-211ENST00000578187 ARID4AP29374 1257 aaPredicted RBP15.68■□□□□ 0.1
CCDC57-211ENST00000578187 RASGRF1Q13972 1273 aa15.68■□□□□ 0.1
CCDC57-211ENST00000578187 VGLL4Q14135 290 aa15.68■□□□□ 0.1
CCDC57-211ENST00000578187 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCDC57-211ENST00000578187 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
CCDC57-211ENST00000578187 DOCK2Q92608 1830 aa15.68■□□□□ 0.1
CCDC57-211ENST00000578187 TESPA1A2RU30 521 aaPredicted RBP15.67■□□□□ 0.1
CCDC57-211ENST00000578187 ARHGEF6Q15052 776 aa15.67■□□□□ 0.1
CCDC57-211ENST00000578187 APOBEC3HQ6NTF7 200 aaKnown RBP15.67■□□□□ 0.1
CCDC57-211ENST00000578187 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.67■□□□□ 0.1
CCDC57-211ENST00000578187 SLF2Q8IX21 1173 aa15.67■□□□□ 0.1
CCDC57-211ENST00000578187 EAF2Q96CJ1 260 aaPredicted RBP15.67■□□□□ 0.1
CCDC57-211ENST00000578187 OTUD5Q96G74 571 aa15.67■□□□□ 0.1
CCDC57-211ENST00000578187 WRNIP1Q96S55 665 aa15.67■□□□□ 0.1
CCDC57-211ENST00000578187 DBNLQ9UJU6 430 aaKnown RBP15.67■□□□□ 0.1
CCDC57-211ENST00000578187 CCL15-CCL14A0A0B4J2E2 113 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 RAB11FIP3O75154 756 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 GJA5P36382 358 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 CRHR2Q13324 411 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 CCL15Q16663 113 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 GORABQ5T7V8 394 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 RHPN1Q8TCX5 695 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 KIF1BPQ96EK5 621 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 ZNF341Q9BYN7 854 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 ZFYVE28Q9HCC9 887 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 TRIM17Q9Y577 477 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 PCDHB15Q9Y5E8 787 aa15.66■□□□□ 0.1
CCDC57-211ENST00000578187 UQCRFS1P1P0C7P4 283 aa15.65■□□□□ 0.1
CCDC57-211ENST00000578187 ERO1BQ86YB8 467 aa15.65■□□□□ 0.1
CCDC57-211ENST00000578187 DZIP1Q86YF9 867 aaKnown RBP15.65■□□□□ 0.1
CCDC57-211ENST00000578187 CDAN1Q8IWY9 1227 aa15.65■□□□□ 0.1
CCDC57-211ENST00000578187 FAM151AQ8WW52 585 aa15.65■□□□□ 0.1
CCDC57-211ENST00000578187 ZNF512BQ96KM6 892 aaPredicted RBP15.65■□□□□ 0.1
CCDC57-211ENST00000578187 R3HDMLQ9H3Y0 253 aa15.65■□□□□ 0.1
CCDC57-211ENST00000578187 TLR7Q9NYK1 1049 aaKnown RBP15.65■□□□□ 0.1
CCDC57-211ENST00000578187 HMG20BQ9P0W2 317 aa15.65■□□□□ 0.1
CCDC57-211ENST00000578187 SPDYE5A6NIY4 337 aa15.64■□□□□ 0.09
CCDC57-211ENST00000578187 CETPP11597 493 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms