RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 RGMBQ6NW40 437 aa23.61■■□□□ 1.37
SS18-208ENST00000577751 MOB2Q70IA6 237 aa23.61■■□□□ 1.37
SS18-208ENST00000577751 EXOC6Q8TAG9 804 aa23.61■■□□□ 1.37
SS18-208ENST00000577751 PIH1D3Q9NQM4 214 aaKnown RBP23.61■■□□□ 1.37
SS18-208ENST00000577751 RAI14Q9P0K7 980 aa23.61■■□□□ 1.37
SS18-208ENST00000577751 THSD7BQ9C0I4 1608 aa23.61■■□□□ 1.37
SS18-208ENST00000577751 MAST2Q6P0Q8 1798 aa23.6■■□□□ 1.37
SS18-208ENST00000577751 GPR75-ASB3A0A0A6YYF3 556 aa23.6■■□□□ 1.37
SS18-208ENST00000577751 LDHCP07864 332 aa23.6■■□□□ 1.37
SS18-208ENST00000577751 GSTO1P78417 241 aa23.6■■□□□ 1.37
SS18-208ENST00000577751 HDAC1Q13547 482 aaPredicted RBP23.6■■□□□ 1.37
SS18-208ENST00000577751 TMEM39BQ9GZU3 492 aa23.6■■□□□ 1.37
SS18-208ENST00000577751 USP40Q9NVE5 1235 aa23.6■■□□□ 1.37
SS18-208ENST00000577751 DOCK2Q92608 1830 aa23.6■■□□□ 1.37
SS18-208ENST00000577751 PCNTO95613 3336 aa23.6■■□□□ 1.37
SS18-208ENST00000577751 UBE2Q2LH0YL09 131 aa23.59■■□□□ 1.37
SS18-208ENST00000577751 MAP3K11Q16584 847 aa23.59■■□□□ 1.37
SS18-208ENST00000577751 PAXIP1Q6ZW49 1069 aaPredicted RBP23.59■■□□□ 1.37
SS18-208ENST00000577751 FAM155AB1AL88 458 aaPredicted RBP23.58■■□□□ 1.37
SS18-208ENST00000577751 BTDP43251 543 aa23.58■■□□□ 1.37
SS18-208ENST00000577751 ARMC9Q7Z3E5 817 aa23.58■■□□□ 1.37
SS18-208ENST00000577751 CDAN1Q8IWY9 1227 aa23.58■■□□□ 1.37
SS18-208ENST00000577751 IDI2Q9BXS1 227 aa23.58■■□□□ 1.37
SS18-208ENST00000577751 BCL11AQ9H165 835 aa23.58■■□□□ 1.37
SS18-208ENST00000577751 ANTXR1Q9H6X2 564 aa23.58■■□□□ 1.37
SS18-208ENST00000577751 NDUFB9Q9Y6M9 179 aa23.58■■□□□ 1.37
SS18-208ENST00000577751 PPP1R12BO60237 982 aaPredicted RBP23.57■■□□□ 1.36
SS18-208ENST00000577751 ATP5JP18859 108 aa23.57■■□□□ 1.36
SS18-208ENST00000577751 RHBDL3P58872 404 aa23.57■■□□□ 1.36
SS18-208ENST00000577751 NFIAQ12857 509 aa23.57■■□□□ 1.36
SS18-208ENST00000577751 TTLL12Q14166 644 aaPredicted RBP23.57■■□□□ 1.36
SS18-208ENST00000577751 LDLRAD1Q5T700 205 aa23.57■■□□□ 1.36
SS18-208ENST00000577751 FAM151AQ8WW52 585 aa23.57■■□□□ 1.36
SS18-208ENST00000577751 RFX7Q2KHR2 1363 aa23.56■■□□□ 1.36
SS18-208ENST00000577751 RPAP1Q9BWH6 1393 aaPredicted RBP23.56■■□□□ 1.36
SS18-208ENST00000577751 MAP2K2P36507 400 aa23.56■■□□□ 1.36
SS18-208ENST00000577751 ZNF157P51786 506 aaPredicted RBP23.56■■□□□ 1.36
SS18-208ENST00000577751 PRKG1Q13976 671 aa23.56■■□□□ 1.36
SS18-208ENST00000577751 CCDC102AQ96A19 550 aa23.56■■□□□ 1.36
SS18-208ENST00000577751 FAM198AQ9UFP1 575 aa23.56■■□□□ 1.36
SS18-208ENST00000577751 ANGEL1Q9UNK9 670 aaKnown RBP23.56■■□□□ 1.36
SS18-208ENST00000577751 FZD1Q9UP38 647 aa23.56■■□□□ 1.36
SS18-208ENST00000577751 USP2O75604 605 aaPredicted RBP23.55■■□□□ 1.36
SS18-208ENST00000577751 MAP4K4O95819 1239 aaPredicted RBP23.55■■□□□ 1.36
SS18-208ENST00000577751 GRM1Q13255 1194 aa23.55■■□□□ 1.36
SS18-208ENST00000577751 NAA16Q6N069 864 aaPredicted RBP23.55■■□□□ 1.36
SS18-208ENST00000577751 AOC2O75106 756 aa23.54■■□□□ 1.36
SS18-208ENST00000577751 WDHD1O75717 1129 aaPredicted RBP23.54■■□□□ 1.36
SS18-208ENST00000577751 SLC10A3P09131 477 aa23.54■■□□□ 1.36
SS18-208ENST00000577751 TTF1Q15361 905 aaPredicted RBP23.54■■□□□ 1.36
SS18-208ENST00000577751 GCC1Q96CN9 775 aa23.54■■□□□ 1.36
SS18-208ENST00000577751 UNCXA6NJT0 531 aa23.53■■□□□ 1.36
SS18-208ENST00000577751 ENTPD3O75355 529 aa23.53■■□□□ 1.36
SS18-208ENST00000577751 IDH1O75874 414 aaKnown RBP23.53■■□□□ 1.36
SS18-208ENST00000577751 PPP4CP60510 307 aa23.53■■□□□ 1.36
SS18-208ENST00000577751 TCP10Q12799 353 aa23.53■■□□□ 1.36
SS18-208ENST00000577751 NOGQ13253 232 aa23.53■■□□□ 1.36
SS18-208ENST00000577751 TMED8Q6PL24 325 aaPredicted RBP23.53■■□□□ 1.36
SS18-208ENST00000577751 ADGRA1Q86SQ6 560 aa23.53■■□□□ 1.36
SS18-208ENST00000577751 RASAL3Q86YV0 1011 aa23.53■■□□□ 1.36
SS18-208ENST00000577751 NPM3O75607 178 aaKnown RBP23.52■■□□□ 1.36
SS18-208ENST00000577751 RGS3P49796 1198 aa23.52■■□□□ 1.36
SS18-208ENST00000577751 MAP3K12Q12852 859 aa23.52■■□□□ 1.36
SS18-208ENST00000577751 ZFPM1Q8IX07 1006 aa23.52■■□□□ 1.36
SS18-208ENST00000577751 HAUS7Q99871 368 aa23.52■■□□□ 1.36
SS18-208ENST00000577751 BOLA2Q9H3K6 86 aa23.52■■□□□ 1.36
SS18-208ENST00000577751 ECHDC1Q9NTX5 307 aa23.52■■□□□ 1.36
SS18-208ENST00000577751 IREB2P48200 963 aaKnown RBP23.51■■□□□ 1.35
SS18-208ENST00000577751 HOOK2Q96ED9 719 aa23.51■■□□□ 1.35
SS18-208ENST00000577751 ZIC5Q96T25 663 aa23.51■■□□□ 1.35
SS18-208ENST00000577751 DNAJC2Q99543 621 aaKnown RBP23.51■■□□□ 1.35
SS18-208ENST00000577751 DDX4Q9NQI0 724 aaKnown RBP23.51■■□□□ 1.35
SS18-208ENST00000577751 WBP1LQ9NX94 342 aa23.51■■□□□ 1.35
SS18-208ENST00000577751 OTOFQ9HC10 1997 aa23.51■■□□□ 1.35
SS18-208ENST00000577751 GOLIM4O00461 696 aa23.5■■□□□ 1.35
SS18-208ENST00000577751 BAG3O95817 575 aa23.5■■□□□ 1.35
SS18-208ENST00000577751 HSPA1AP0DMV8 641 aaKnown RBP23.5■■□□□ 1.35
SS18-208ENST00000577751 HSPA1BP0DMV9 641 aaKnown RBP23.5■■□□□ 1.35
SS18-208ENST00000577751 MAP2K1Q02750 393 aaPredicted RBP23.5■■□□□ 1.35
SS18-208ENST00000577751 RWDD1Q9H446 243 aaPredicted RBP23.5■■□□□ 1.35
SS18-208ENST00000577751 PAG1Q9NWQ8 432 aa23.5■■□□□ 1.35
SS18-208ENST00000577751 AATFQ9NY61 560 aaKnown RBP eCLIP23.5■■□□□ 1.35
SS18-208ENST00000577751 AK9Q5TCS8 1911 aa23.5■■□□□ 1.35
SS18-208ENST00000577751 CDK5RAP2Q96SN8 1893 aa23.49■■□□□ 1.35
SS18-208ENST00000577751 CYP7A1P22680 504 aa23.49■■□□□ 1.35
SS18-208ENST00000577751 MAGEB6Q8N7X4 407 aa23.49■■□□□ 1.35
SS18-208ENST00000577751 EDC3Q96F86 508 aaKnown RBP23.49■■□□□ 1.35
SS18-208ENST00000577751 FOCADQ5VW36 1801 aa23.48■■□□□ 1.35
SS18-208ENST00000577751 IGHDP01880 384 aa23.48■■□□□ 1.35
SS18-208ENST00000577751 PLCG2P16885 1265 aa23.48■■□□□ 1.35
SS18-208ENST00000577751 ANKRD45Q5TZF3 282 aa23.48■■□□□ 1.35
SS18-208ENST00000577751 SH3BP5LQ7L8J4 393 aa23.48■■□□□ 1.35
SS18-208ENST00000577751 SMC5Q8IY18 1101 aa23.48■■□□□ 1.35
SS18-208ENST00000577751 ANKRD13AQ8IZ07 590 aa23.48■■□□□ 1.35
SS18-208ENST00000577751 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.48■■□□□ 1.35
SS18-208ENST00000577751 SH3RF3Q8TEJ3 882 aaPredicted RBP23.48■■□□□ 1.35
SS18-208ENST00000577751 NOL10Q9BSC4 688 aaKnown RBP23.48■■□□□ 1.35
SS18-208ENST00000577751 IRX6P78412 446 aaPredicted RBP23.47■■□□□ 1.35
SS18-208ENST00000577751 KIF23Q02241 960 aaPredicted RBP23.47■■□□□ 1.35
SS18-208ENST00000577751 DCAF15Q66K64 600 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms