RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.36■□□□□ 0.05
CSNK1D-206ENST00000577578 ABHD8Q96I13 439 aa15.36■□□□□ 0.05
CSNK1D-206ENST00000577578 NEUROD6Q96NK8 337 aa15.36■□□□□ 0.05
CSNK1D-206ENST00000577578 HMG20BQ9P0W2 317 aa15.36■□□□□ 0.05
CSNK1D-206ENST00000577578 RFX7Q2KHR2 1363 aa15.36■□□□□ 0.05
CSNK1D-206ENST00000577578 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
CSNK1D-206ENST00000577578 MKRN3Q13064 507 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-206ENST00000577578 CEP85Q6P2H3 762 aa15.35■□□□□ 0.05
CSNK1D-206ENST00000577578 FAM151AQ8WW52 585 aa15.35■□□□□ 0.05
CSNK1D-206ENST00000577578 HOOK2Q96ED9 719 aa15.35■□□□□ 0.05
CSNK1D-206ENST00000577578 TESPA1A2RU30 521 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 SURF6O75683 361 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 CAPN15O75808 1086 aa15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 GJA5P36382 358 aa15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 MAP3K9P80192 1104 aa15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 NFIAQ12857 509 aa15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 VGLL4Q14135 290 aa15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 SPTY2D1Q68D10 685 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 SPATA5Q8NB90 893 aa15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 ZNF384Q8TF68 577 aa15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
CSNK1D-206ENST00000577578 DOCK2Q92608 1830 aa15.33■□□□□ 0.05
CSNK1D-206ENST00000577578 ALDH1A1P00352 501 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 UQCRFS1P1P0C7P4 283 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 MCAMP43121 646 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 PI16Q6UXB8 463 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 DZIP1Q86YF9 867 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 SLF2Q8IX21 1173 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 ZNF512BQ96KM6 892 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 IDI2Q9BXS1 227 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 MCOLN1Q9GZU1 580 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 FAM198AQ9UFP1 575 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 ABCF2Q9UG63 623 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 RCAN3Q9UKA8 241 aa15.33■□□□□ 0.04
CSNK1D-206ENST00000577578 MAST2Q6P0Q8 1798 aa15.32■□□□□ 0.04
CSNK1D-206ENST00000577578 MYO5AQ9Y4I1 1855 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-206ENST00000577578 MECOMQ03112 1051 aa15.32■□□□□ 0.04
CSNK1D-206ENST00000577578 GORABQ5T7V8 394 aa15.32■□□□□ 0.04
CSNK1D-206ENST00000577578 IFNL1Q8IU54 200 aa15.32■□□□□ 0.04
CSNK1D-206ENST00000577578 OPTNQ96CV9 577 aa15.32■□□□□ 0.04
CSNK1D-206ENST00000577578 USP40Q9NVE5 1235 aa15.32■□□□□ 0.04
CSNK1D-206ENST00000577578 MROH7-TTC4A0A0A0MT08 1334 aa15.32■□□□□ 0.04
CSNK1D-206ENST00000577578 ATRNL1Q5VV63 1379 aa15.32■□□□□ 0.04
CSNK1D-206ENST00000577578 GPR75-ASB3A0A0A6YYF3 556 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 SPDYE5A6NIY4 337 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 IGF2BP3O00425 579 aaKnown RBP eCLIP15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 ENTPD3O75355 529 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 WDHD1O75717 1129 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 TBC1D8O95759 1140 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 DGKZQ13574 1117 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 DCAF15Q66K64 600 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 ERICH6Q7L0X2 663 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 NSUN4Q96CB9 384 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 MS4A4AQ96JQ5 239 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 DBNDD2Q9BQY9 259 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 ZBTB40Q9NUA8 1239 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 ZNF112Q9UJU3 913 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 DDX19BQ9UMR2 479 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 CSADQ9Y600 493 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 SNCAIPQ9Y6H5 919 aa15.31■□□□□ 0.04
CSNK1D-206ENST00000577578 GPR25O00155 361 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 IGSF3O75054 1194 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 HTTP42858 3142 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 RHBDL3P58872 404 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 TCP10Q12799 353 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 CCDC158Q5M9N0 1113 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 TBC1D9Q6ZT07 1266 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 ZNF296Q8WUU4 475 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 WRNIP1Q96S55 665 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 PTPN18Q99952 460 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 ZNF341Q9BYN7 854 aa15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 DBNLQ9UJU6 430 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-206ENST00000577578 MAP4K4O95819 1239 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 BTDP43251 543 aa15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 RGS3P49796 1198 aa15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 MAP3K10Q02779 954 aa15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 CTU1Q7Z7A3 348 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 ERO1BQ86YB8 467 aa15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 ERC1Q8IUD2 1116 aa15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 ZFPM1Q8IX07 1006 aa15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 RPAP2Q8IXW5 612 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 EAF2Q96CJ1 260 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 R3HDMLQ9H3Y0 253 aa15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
CSNK1D-206ENST00000577578 COL2A1P02458 1487 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-206ENST00000577578 GSTO1P78417 241 aa15.28■□□□□ 0.04
CSNK1D-206ENST00000577578 PDE3AQ14432 1141 aa15.28■□□□□ 0.04
CSNK1D-206ENST00000577578 MIGA2Q7L4E1 593 aa15.28■□□□□ 0.04
CSNK1D-206ENST00000577578 SH3BP5LQ7L8J4 393 aa15.28■□□□□ 0.04
CSNK1D-206ENST00000577578 ZKSCAN4Q969J2 545 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-206ENST00000577578 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
CSNK1D-206ENST00000577578 FOCADQ5VW36 1801 aa15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 LDHCP07864 332 aa15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 GTF2A2P52657 109 aa15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 HSP90AB4PQ58FF6 505 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms