RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 APOBEC3HQ6NTF7 200 aaKnown RBP16.79■□□□□ 0.28
COPS3-214ENST00000577246 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.79■□□□□ 0.28
COPS3-214ENST00000577246 PARK7Q99497 189 aaKnown RBP16.79■□□□□ 0.28
COPS3-214ENST00000577246 CPA4Q9UI42 421 aa16.79■□□□□ 0.28
COPS3-214ENST00000577246 NR2E3Q9Y5X4 410 aa16.79■□□□□ 0.28
COPS3-214ENST00000577246 MYPNQ86TC9 1320 aa16.78■□□□□ 0.28
COPS3-214ENST00000577246 GJB1P08034 283 aa16.78■□□□□ 0.28
COPS3-214ENST00000577246 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
COPS3-214ENST00000577246 CAPN2P17655 700 aa16.78■□□□□ 0.28
COPS3-214ENST00000577246 OSBPP22059 807 aa16.78■□□□□ 0.28
COPS3-214ENST00000577246 GJA8P48165 433 aa16.78■□□□□ 0.28
COPS3-214ENST00000577246 FAM151AQ8WW52 585 aa16.78■□□□□ 0.28
COPS3-214ENST00000577246 SHISA4Q96DD7 197 aa16.78■□□□□ 0.28
COPS3-214ENST00000577246 BIN2Q9UBW5 565 aaPredicted RBP16.78■□□□□ 0.28
COPS3-214ENST00000577246 KCNH4Q9UQ05 1017 aa16.78■□□□□ 0.28
COPS3-214ENST00000577246 UTYO14607 1347 aa16.77■□□□□ 0.28
COPS3-214ENST00000577246 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
COPS3-214ENST00000577246 FCGRTP55899 365 aa16.77■□□□□ 0.28
COPS3-214ENST00000577246 MTFR1Q15390 333 aa16.77■□□□□ 0.28
COPS3-214ENST00000577246 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
COPS3-214ENST00000577246 RABL6Q3YEC7 729 aaPredicted RBP16.77■□□□□ 0.28
COPS3-214ENST00000577246 MIGA2Q7L4E1 593 aa16.77■□□□□ 0.28
COPS3-214ENST00000577246 SLAIN1Q8ND83 568 aa16.77■□□□□ 0.28
COPS3-214ENST00000577246 WDR66Q8TBY9 1149 aa16.77■□□□□ 0.28
COPS3-214ENST00000577246 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.28
COPS3-214ENST00000577246 NBPF7P0C2Y1 421 aaPredicted RBP16.76■□□□□ 0.27
COPS3-214ENST00000577246 CCL5P13501 91 aa16.76■□□□□ 0.27
COPS3-214ENST00000577246 INPP5BP32019 993 aa16.76■□□□□ 0.27
COPS3-214ENST00000577246 BCAMP50895 628 aa16.76■□□□□ 0.27
COPS3-214ENST00000577246 LRRC24Q50LG9 513 aa16.76■□□□□ 0.27
COPS3-214ENST00000577246 VGLL2Q8N8G2 317 aa16.76■□□□□ 0.27
COPS3-214ENST00000577246 KAZALD1Q96I82 304 aa16.76■□□□□ 0.27
COPS3-214ENST00000577246 RNF208Q9H0X6 261 aa16.76■□□□□ 0.27
COPS3-214ENST00000577246 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
COPS3-214ENST00000577246 ZNF112Q9UJU3 913 aa16.76■□□□□ 0.27
COPS3-214ENST00000577246 SALL2Q9Y467 1007 aaPredicted RBP16.76■□□□□ 0.27
COPS3-214ENST00000577246 ADGRA2Q96PE1 1338 aa16.75■□□□□ 0.27
COPS3-214ENST00000577246 CXCL11O14625 94 aa16.75■□□□□ 0.27
COPS3-214ENST00000577246 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
COPS3-214ENST00000577246 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
COPS3-214ENST00000577246 NOL9Q5SY16 702 aaKnown RBP16.75■□□□□ 0.27
COPS3-214ENST00000577246 SLC5A1P13866 664 aa16.74■□□□□ 0.27
COPS3-214ENST00000577246 FASTKD5Q7L8L6 764 aaKnown RBP16.74■□□□□ 0.27
COPS3-214ENST00000577246 UBE2Q1Q7Z7E8 422 aa16.74■□□□□ 0.27
COPS3-214ENST00000577246 MRS2Q9HD23 443 aa16.74■□□□□ 0.27
COPS3-214ENST00000577246 A0A1W2PPC1 479 aa16.73■□□□□ 0.27
COPS3-214ENST00000577246 FARP2O94887 1054 aaPredicted RBP16.73■□□□□ 0.27
COPS3-214ENST00000577246 CTGFP29279 349 aa16.73■□□□□ 0.27
COPS3-214ENST00000577246 PRKCZQ05513 592 aa16.73■□□□□ 0.27
COPS3-214ENST00000577246 U2AF1L4Q8WU68 220 aaKnown RBP16.73■□□□□ 0.27
COPS3-214ENST00000577246 LPIN2Q92539 896 aa16.73■□□□□ 0.27
COPS3-214ENST00000577246 BCRP11274 1271 aa16.72■□□□□ 0.27
COPS3-214ENST00000577246 TCP10Q12799 353 aa16.72■□□□□ 0.27
COPS3-214ENST00000577246 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
COPS3-214ENST00000577246 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
COPS3-214ENST00000577246 FGFR2P21802 821 aa16.71■□□□□ 0.27
COPS3-214ENST00000577246 CDC42EP5Q6NZY7 148 aa16.71■□□□□ 0.27
COPS3-214ENST00000577246 GNL3LQ9NVN8 582 aaKnown RBP16.71■□□□□ 0.27
COPS3-214ENST00000577246 SLC45A1Q9Y2W3 748 aa16.71■□□□□ 0.27
COPS3-214ENST00000577246 DAGLAQ9Y4D2 1042 aa16.71■□□□□ 0.27
COPS3-214ENST00000577246 ZSWIM8A7E2V4 1837 aa16.7■□□□□ 0.26
COPS3-214ENST00000577246 SGPL1O95470 568 aa16.7■□□□□ 0.26
COPS3-214ENST00000577246 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
COPS3-214ENST00000577246 MOGSQ13724 837 aa16.7■□□□□ 0.26
COPS3-214ENST00000577246 PXYLP1Q8TE99 480 aa16.7■□□□□ 0.26
COPS3-214ENST00000577246 PTPRCP08575 1304 aa16.7■□□□□ 0.26
COPS3-214ENST00000577246 EYA2O00167 538 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 ZBTB7BO15156 539 aaPredicted RBP16.69■□□□□ 0.26
COPS3-214ENST00000577246 ADCY3O60266 1144 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 EVI5O60447 810 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 CYP2C8P10632 490 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 GPAT2Q6NUI2 795 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 SCYL3Q8IZE3 742 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 SMCR8Q8TEV9 937 aaPredicted RBP16.69■□□□□ 0.26
COPS3-214ENST00000577246 PRO3102Q9H379 93 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
COPS3-214ENST00000577246 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 ZHX2Q9Y6X8 837 aa16.69■□□□□ 0.26
COPS3-214ENST00000577246 A0A0G2JLL6 359 aaPredicted RBP16.68■□□□□ 0.26
COPS3-214ENST00000577246 NFIAQ12857 509 aa16.68■□□□□ 0.26
COPS3-214ENST00000577246 IRF5Q13568 498 aa16.68■□□□□ 0.26
COPS3-214ENST00000577246 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
COPS3-214ENST00000577246 PRRT2Q7Z6L0 340 aaPredicted RBP16.68■□□□□ 0.26
COPS3-214ENST00000577246 ZGPATQ8N5A5 531 aaKnown RBP16.68■□□□□ 0.26
COPS3-214ENST00000577246 UNC93B1Q9H1C4 597 aa16.68■□□□□ 0.26
COPS3-214ENST00000577246 TRIOBPQ9H2D6 2365 aa16.68■□□□□ 0.26
COPS3-214ENST00000577246 TNPO2O14787 897 aaKnown RBP16.67■□□□□ 0.26
COPS3-214ENST00000577246 SEMA3EO15041 775 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 ENTPD3O75355 529 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 TFRCP02786 760 aaKnown RBP16.67■□□□□ 0.26
COPS3-214ENST00000577246 PRDX5P30044 214 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 FLT3LGP49771 235 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 SLC17A8Q8NDX2 589 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 FAM198AQ9UFP1 575 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 DENND2AQ9ULE3 1009 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 GABRQQ9UN88 632 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 LRRFIP2Q9Y608 721 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms