RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 AAK1Q2M2I8 961 aa9.45□□□□□ -0.9
RAB40B-210ENST00000576148 GPAT2Q6NUI2 795 aa9.45□□□□□ -0.9
RAB40B-210ENST00000576148 COL3A1P02461 1466 aaPredicted RBP9.45□□□□□ -0.9
RAB40B-210ENST00000576148 FAM86C2PA6NEL3 165 aa9.44□□□□□ -0.9
RAB40B-210ENST00000576148 DNAJB2P25686 324 aa9.44□□□□□ -0.9
RAB40B-210ENST00000576148 KLRK1P26718 216 aa9.44□□□□□ -0.9
RAB40B-210ENST00000576148 NHLH1Q02575 133 aa9.44□□□□□ -0.9
RAB40B-210ENST00000576148 CC2D1BQ5T0F9 858 aaKnown RBP9.44□□□□□ -0.9
RAB40B-210ENST00000576148 DCAF15Q66K64 600 aa9.44□□□□□ -0.9
RAB40B-210ENST00000576148 SMCR8Q8TEV9 937 aaPredicted RBP9.44□□□□□ -0.9
RAB40B-210ENST00000576148 RNPC3Q96LT9 517 aaKnown RBP9.44□□□□□ -0.9
RAB40B-210ENST00000576148 SENP6Q9GZR1 1112 aaPredicted RBP9.44□□□□□ -0.9
RAB40B-210ENST00000576148 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
RAB40B-210ENST00000576148 CXCL11O14625 94 aa9.43□□□□□ -0.9
RAB40B-210ENST00000576148 KCNJ4P48050 445 aa9.43□□□□□ -0.9
RAB40B-210ENST00000576148 ATN1P54259 1190 aaPredicted RBP9.43□□□□□ -0.9
RAB40B-210ENST00000576148 FASTKD5Q7L8L6 764 aaKnown RBP9.43□□□□□ -0.9
RAB40B-210ENST00000576148 DZIP1LQ8IYY4 767 aaKnown RBP9.43□□□□□ -0.9
RAB40B-210ENST00000576148 BADQ92934 168 aa9.43□□□□□ -0.9
RAB40B-210ENST00000576148 CFAP53Q96M91 514 aa9.43□□□□□ -0.9
RAB40B-210ENST00000576148 ANKRD2Q9GZV1 360 aa9.43□□□□□ -0.9
RAB40B-210ENST00000576148 C11orf16Q9NQ32 467 aa9.43□□□□□ -0.9
RAB40B-210ENST00000576148 TSPYL4Q9UJ04 414 aa9.43□□□□□ -0.9
RAB40B-210ENST00000576148 SERPINA10Q9UK55 444 aa9.43□□□□□ -0.9
RAB40B-210ENST00000576148 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.42□□□□□ -0.9
RAB40B-210ENST00000576148 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.42□□□□□ -0.9
RAB40B-210ENST00000576148 PRKAR2AP13861 404 aaKnown RBP9.42□□□□□ -0.9
RAB40B-210ENST00000576148 IGFBP4P22692 258 aa9.42□□□□□ -0.9
RAB40B-210ENST00000576148 TIFAQ96CG3 184 aa9.42□□□□□ -0.9
RAB40B-210ENST00000576148 ZNF341Q9BYN7 854 aa9.42□□□□□ -0.9
RAB40B-210ENST00000576148 PRDM5Q9NQX1 630 aaPredicted RBP9.42□□□□□ -0.9
RAB40B-210ENST00000576148 MGAMO43451 1857 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 ECM29Q5VYK3 1845 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 PCCAP05165 728 aaPredicted RBP9.41□□□□□ -0.9
RAB40B-210ENST00000576148 NEFMP07197 916 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 INPP5BP32019 993 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 RTP1P59025 263 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 MAP3K21Q5TCX8 1036 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 LHX8Q68G74 356 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 ANKRD13CQ8N6S4 541 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 PRDM12Q9H4Q4 367 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 GJD2Q9UKL4 321 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 ATP11BQ9Y2G3 1177 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 SLC45A1Q9Y2W3 748 aa9.41□□□□□ -0.9
RAB40B-210ENST00000576148 PRR33A8MZF0 331 aa9.4□□□□□ -0.9
RAB40B-210ENST00000576148 IGHMBP2P38935 993 aaKnown RBP9.4□□□□□ -0.9
RAB40B-210ENST00000576148 KCNQ1P51787 676 aa9.4□□□□□ -0.9
RAB40B-210ENST00000576148 TFF2Q03403 129 aa9.4□□□□□ -0.9
RAB40B-210ENST00000576148 MIGA2Q7L4E1 593 aa9.4□□□□□ -0.9
RAB40B-210ENST00000576148 TRIB2Q92519 343 aa9.4□□□□□ -0.9
RAB40B-210ENST00000576148 JARID2Q92833 1246 aaPredicted RBP9.4□□□□□ -0.9
RAB40B-210ENST00000576148 CHPF2Q9P2E5 772 aa9.4□□□□□ -0.9
RAB40B-210ENST00000576148 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.9
RAB40B-210ENST00000576148 JAG2Q9Y219 1238 aa9.4□□□□□ -0.9
RAB40B-210ENST00000576148 ST18O60284 1047 aa9.39□□□□□ -0.91
RAB40B-210ENST00000576148 IL1R1P14778 569 aa9.39□□□□□ -0.91
RAB40B-210ENST00000576148 CTSWP56202 376 aa9.39□□□□□ -0.91
RAB40B-210ENST00000576148 FAM110CQ1W6H9 321 aa9.39□□□□□ -0.91
RAB40B-210ENST00000576148 GADL1Q6ZQY3 521 aa9.39□□□□□ -0.91
RAB40B-210ENST00000576148 ZNF804AQ7Z570 1209 aa9.39□□□□□ -0.91
RAB40B-210ENST00000576148 UIMC1Q96RL1 719 aa9.39□□□□□ -0.91
RAB40B-210ENST00000576148 KCNH6Q9H252 994 aa9.39□□□□□ -0.91
RAB40B-210ENST00000576148 TMOD2Q9NZR1 351 aa9.39□□□□□ -0.91
RAB40B-210ENST00000576148 A0A0G2JLL6 359 aaPredicted RBP9.38□□□□□ -0.91
RAB40B-210ENST00000576148 PI4K2BG5E9Z4 385 aa9.38□□□□□ -0.91
RAB40B-210ENST00000576148 CYP2B6P20813 491 aa9.38□□□□□ -0.91
RAB40B-210ENST00000576148 CRKP46108 304 aa9.38□□□□□ -0.91
RAB40B-210ENST00000576148 CACNB2Q08289 660 aaPredicted RBP9.38□□□□□ -0.91
RAB40B-210ENST00000576148 CNGB1Q14028 1251 aaPredicted RBP9.38□□□□□ -0.91
RAB40B-210ENST00000576148 ADGRE1Q14246 886 aa9.38□□□□□ -0.91
RAB40B-210ENST00000576148 PRRT2Q7Z6L0 340 aaPredicted RBP9.38□□□□□ -0.91
RAB40B-210ENST00000576148 FAM83AQ86UY5 434 aa9.38□□□□□ -0.91
RAB40B-210ENST00000576148 TRMT44Q8IYL2 757 aaKnown RBP9.38□□□□□ -0.91
RAB40B-210ENST00000576148 CCDC191Q8NCU4 936 aa9.38□□□□□ -0.91
RAB40B-210ENST00000576148 FBXL18Q96ME1 805 aa9.38□□□□□ -0.91
RAB40B-210ENST00000576148 GREM2Q9H772 168 aa9.38□□□□□ -0.91
RAB40B-210ENST00000576148 ZNF112Q9UJU3 913 aa9.38□□□□□ -0.91
RAB40B-210ENST00000576148 TCF20Q9UGU0 1960 aaKnown RBP9.37□□□□□ -0.91
RAB40B-210ENST00000576148 CCND3P30281 292 aaPredicted RBP9.37□□□□□ -0.91
RAB40B-210ENST00000576148 CACNB3P54284 484 aa9.37□□□□□ -0.91
RAB40B-210ENST00000576148 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
RAB40B-210ENST00000576148 MFSD14BQ5SR56 506 aa9.37□□□□□ -0.91
RAB40B-210ENST00000576148 NOL9Q5SY16 702 aaKnown RBP9.37□□□□□ -0.91
RAB40B-210ENST00000576148 C15orf52Q6ZUT6 534 aaKnown RBP9.37□□□□□ -0.91
RAB40B-210ENST00000576148 TTLL11Q8NHH1 800 aa9.37□□□□□ -0.91
RAB40B-210ENST00000576148 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.91
RAB40B-210ENST00000576148 MPHOSPH8Q99549 860 aa9.37□□□□□ -0.91
RAB40B-210ENST00000576148 CWC25Q9NXE8 425 aaPredicted RBP9.37□□□□□ -0.91
RAB40B-210ENST00000576148 DBF4Q9UBU7 674 aaPredicted RBP9.37□□□□□ -0.91
RAB40B-210ENST00000576148 ZHX2Q9Y6X8 837 aa9.37□□□□□ -0.91
RAB40B-210ENST00000576148 DNAH12Q6ZR08 3092 aa9.36□□□□□ -0.91
RAB40B-210ENST00000576148 ERC2O15083 957 aa9.36□□□□□ -0.91
RAB40B-210ENST00000576148 XRCC5P13010 732 aaKnown RBP9.36□□□□□ -0.91
RAB40B-210ENST00000576148 ZKSCAN1P17029 563 aaPredicted RBP9.36□□□□□ -0.91
RAB40B-210ENST00000576148 GCLCP48506 637 aaPredicted RBP9.36□□□□□ -0.91
RAB40B-210ENST00000576148 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
RAB40B-210ENST00000576148 FKBP1CQ5VVH2 108 aa9.36□□□□□ -0.91
RAB40B-210ENST00000576148 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
RAB40B-210ENST00000576148 MICALL1Q8N3F8 863 aa9.36□□□□□ -0.91
RAB40B-210ENST00000576148 MYD88Q99836 296 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms