RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CPA4Q9UI42 421 aa11.34□□□□□ -0.59
SMG6-218ENST00000575454 KCNH4Q9UQ05 1017 aa11.34□□□□□ -0.59
SMG6-218ENST00000575454 CCL5P13501 91 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 CACNB3P54284 484 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 FCGRTP55899 365 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 METTL24Q5JXM2 366 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 UBE2Q1Q7Z7E8 422 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.33□□□□□ -0.6
SMG6-218ENST00000575454 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 FAM151AQ8WW52 585 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 SHISA4Q96DD7 197 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 PUS3Q9BZE2 481 aaKnown RBP11.33□□□□□ -0.6
SMG6-218ENST00000575454 MYPNQ86TC9 1320 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 KIF16BQ96L93 1317 aa11.33□□□□□ -0.6
SMG6-218ENST00000575454 RPAP1Q9BWH6 1393 aaPredicted RBP11.32□□□□□ -0.6
SMG6-218ENST00000575454 CXCL11O14625 94 aa11.32□□□□□ -0.6
SMG6-218ENST00000575454 PDE8BO95263 885 aa11.32□□□□□ -0.6
SMG6-218ENST00000575454 IFIT1P09914 478 aaKnown RBP11.32□□□□□ -0.6
SMG6-218ENST00000575454 EXOSC9Q06265 439 aaKnown RBP11.32□□□□□ -0.6
SMG6-218ENST00000575454 GRIK5Q16478 980 aa11.32□□□□□ -0.6
SMG6-218ENST00000575454 MIGA2Q7L4E1 593 aa11.32□□□□□ -0.6
SMG6-218ENST00000575454 SLC17A8Q8NDX2 589 aa11.32□□□□□ -0.6
SMG6-218ENST00000575454 WDR66Q8TBY9 1149 aa11.32□□□□□ -0.6
SMG6-218ENST00000575454 ZNF112Q9UJU3 913 aa11.32□□□□□ -0.6
SMG6-218ENST00000575454 IQSEC3Q9UPP2 1182 aaPredicted RBP11.32□□□□□ -0.6
SMG6-218ENST00000575454 FARP2O94887 1054 aaPredicted RBP11.31□□□□□ -0.6
SMG6-218ENST00000575454 INPP5BP32019 993 aa11.31□□□□□ -0.6
SMG6-218ENST00000575454 NOL9Q5SY16 702 aaKnown RBP11.31□□□□□ -0.6
SMG6-218ENST00000575454 SLC4A10Q6U841 1118 aa11.31□□□□□ -0.6
SMG6-218ENST00000575454 FASTKD5Q7L8L6 764 aaKnown RBP11.31□□□□□ -0.6
SMG6-218ENST00000575454 U2AF1L4Q8WU68 220 aaKnown RBP11.31□□□□□ -0.6
SMG6-218ENST00000575454 PRO3102Q9H379 93 aa11.31□□□□□ -0.6
SMG6-218ENST00000575454 DLL1O00548 723 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 ZBTB7BO15156 539 aaPredicted RBP11.3□□□□□ -0.6
SMG6-218ENST00000575454 EVI5O60447 810 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 SGPL1O95470 568 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 CTGFP29279 349 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 ZEB1P37275 1124 aaPredicted RBP11.3□□□□□ -0.6
SMG6-218ENST00000575454 BCAMP50895 628 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 PRKCZQ05513 592 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
SMG6-218ENST00000575454 RABL6Q3YEC7 729 aaPredicted RBP11.3□□□□□ -0.6
SMG6-218ENST00000575454 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 UTYO14607 1347 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 ADGRA2Q96PE1 1338 aa11.3□□□□□ -0.6
SMG6-218ENST00000575454 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
SMG6-218ENST00000575454 TFRCP02786 760 aaKnown RBP11.29□□□□□ -0.6
SMG6-218ENST00000575454 BCRP11274 1271 aa11.29□□□□□ -0.6
SMG6-218ENST00000575454 VGLL2Q8N8G2 317 aa11.29□□□□□ -0.6
SMG6-218ENST00000575454 KAZALD1Q96I82 304 aa11.29□□□□□ -0.6
SMG6-218ENST00000575454 BICC1Q9H694 974 aaKnown RBP11.29□□□□□ -0.6
SMG6-218ENST00000575454 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
SMG6-218ENST00000575454 SLC45A1Q9Y2W3 748 aa11.29□□□□□ -0.6
SMG6-218ENST00000575454 ADCY3O60266 1144 aa11.28□□□□□ -0.6
SMG6-218ENST00000575454 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
SMG6-218ENST00000575454 IRF5Q13568 498 aa11.28□□□□□ -0.6
SMG6-218ENST00000575454 MOGSQ13724 837 aa11.28□□□□□ -0.6
SMG6-218ENST00000575454 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
SMG6-218ENST00000575454 LPIN2Q92539 896 aa11.28□□□□□ -0.6
SMG6-218ENST00000575454 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
SMG6-218ENST00000575454 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
SMG6-218ENST00000575454 A0A0G2JLL6 359 aaPredicted RBP11.27□□□□□ -0.61
SMG6-218ENST00000575454 CYP2C8P10632 490 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 SLC5A1P13866 664 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 FLT3LGP49771 235 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 TCP10Q12799 353 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 GPAT2Q6NUI2 795 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 GPR153Q6NV75 609 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 CDC42EP5Q6NZY7 148 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 PRRT2Q7Z6L0 340 aaPredicted RBP11.27□□□□□ -0.61
SMG6-218ENST00000575454 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 USP40Q9NVE5 1235 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 DAGLAQ9Y4D2 1042 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 ZHX2Q9Y6X8 837 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 VCANP13611 3396 aa11.27□□□□□ -0.61
SMG6-218ENST00000575454 ZNF646O15015 1829 aaPredicted RBP11.26□□□□□ -0.61
SMG6-218ENST00000575454 TNPO2O14787 897 aaKnown RBP11.26□□□□□ -0.61
SMG6-218ENST00000575454 INHAP05111 366 aa11.26□□□□□ -0.61
SMG6-218ENST00000575454 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
SMG6-218ENST00000575454 FGFR2P21802 821 aa11.26□□□□□ -0.61
SMG6-218ENST00000575454 NECAB2Q7Z6G3 386 aa11.26□□□□□ -0.61
SMG6-218ENST00000575454 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
SMG6-218ENST00000575454 SMCR8Q8TEV9 937 aaPredicted RBP11.26□□□□□ -0.61
SMG6-218ENST00000575454 COA7Q96BR5 231 aa11.26□□□□□ -0.61
SMG6-218ENST00000575454 DEFB118Q96PH6 123 aa11.26□□□□□ -0.61
SMG6-218ENST00000575454 LRRFIP2Q9Y608 721 aaKnown RBP11.26□□□□□ -0.61
SMG6-218ENST00000575454 CTNND1O60716 968 aaKnown RBP11.25□□□□□ -0.61
SMG6-218ENST00000575454 ENTPD3O75355 529 aa11.25□□□□□ -0.61
SMG6-218ENST00000575454 PTPRAP18433 802 aa11.25□□□□□ -0.61
SMG6-218ENST00000575454 NFIAQ12857 509 aa11.25□□□□□ -0.61
SMG6-218ENST00000575454 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
SMG6-218ENST00000575454 ANKRD44Q8N8A2 993 aa11.25□□□□□ -0.61
SMG6-218ENST00000575454 ANKLE1Q8NAG6 615 aa11.25□□□□□ -0.61
SMG6-218ENST00000575454 PAK6Q9NQU5 681 aaPredicted RBP11.25□□□□□ -0.61
SMG6-218ENST00000575454 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
SMG6-218ENST00000575454 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
SMG6-218ENST00000575454 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
SMG6-218ENST00000575454 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
SMG6-218ENST00000575454 AFG3L2Q9Y4W6 797 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms