RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 GPR108Q9NPR9 543 aa13.05□□□□□ -0.32
LITAF-216ENST00000574848 TMOD2Q9NZR1 351 aa13.05□□□□□ -0.32
LITAF-216ENST00000574848 GAKO14976 1311 aa13.05□□□□□ -0.32
LITAF-216ENST00000574848 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
LITAF-216ENST00000574848 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
LITAF-216ENST00000574848 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
LITAF-216ENST00000574848 TIMM10P62072 90 aa13.04□□□□□ -0.32
LITAF-216ENST00000574848 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
LITAF-216ENST00000574848 DIXDC1Q155Q3 683 aa13.04□□□□□ -0.32
LITAF-216ENST00000574848 ITPRIPQ8IWB1 547 aa13.04□□□□□ -0.32
LITAF-216ENST00000574848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.04□□□□□ -0.32
LITAF-216ENST00000574848 ABHD8Q96I13 439 aa13.04□□□□□ -0.32
LITAF-216ENST00000574848 CACNB3P54284 484 aa13.03□□□□□ -0.32
LITAF-216ENST00000574848 INHBEP58166 350 aa13.03□□□□□ -0.32
LITAF-216ENST00000574848 HOOK2Q96ED9 719 aa13.03□□□□□ -0.32
LITAF-216ENST00000574848 SLC10A4Q96EP9 437 aa13.03□□□□□ -0.32
LITAF-216ENST00000574848 NOP58Q9Y2X3 529 aaKnown RBP13.03□□□□□ -0.32
LITAF-216ENST00000574848 GJA5P36382 358 aa13.02□□□□□ -0.33
LITAF-216ENST00000574848 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
LITAF-216ENST00000574848 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.33
LITAF-216ENST00000574848 CDC42EP5Q6NZY7 148 aa13.02□□□□□ -0.33
LITAF-216ENST00000574848 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.33
LITAF-216ENST00000574848 FAM151AQ8WW52 585 aa13.02□□□□□ -0.33
LITAF-216ENST00000574848 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
LITAF-216ENST00000574848 MCOLN1Q9GZU1 580 aa13.02□□□□□ -0.33
LITAF-216ENST00000574848 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
LITAF-216ENST00000574848 CAPN15O75808 1086 aa13.01□□□□□ -0.33
LITAF-216ENST00000574848 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
LITAF-216ENST00000574848 VGLL4Q14135 290 aa13.01□□□□□ -0.33
LITAF-216ENST00000574848 C20orf194Q5TEA3 1177 aa13.01□□□□□ -0.33
LITAF-216ENST00000574848 SPTY2D1Q68D10 685 aaPredicted RBP13.01□□□□□ -0.33
LITAF-216ENST00000574848 CEP85Q6P2H3 762 aa13.01□□□□□ -0.33
LITAF-216ENST00000574848 IDI2Q9BXS1 227 aa13.01□□□□□ -0.33
LITAF-216ENST00000574848 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
LITAF-216ENST00000574848 HMG20BQ9P0W2 317 aa13.01□□□□□ -0.33
LITAF-216ENST00000574848 ATRNL1Q5VV63 1379 aa13.01□□□□□ -0.33
LITAF-216ENST00000574848 COL2A1P02458 1487 aaPredicted RBP13□□□□□ -0.33
LITAF-216ENST00000574848 MROH7-TTC4A0A0A0MT08 1334 aa13□□□□□ -0.33
LITAF-216ENST00000574848 MAP3K9P80192 1104 aa13□□□□□ -0.33
LITAF-216ENST00000574848 NFIAQ12857 509 aa13□□□□□ -0.33
LITAF-216ENST00000574848 DGKZQ13574 1117 aa13□□□□□ -0.33
LITAF-216ENST00000574848 TNNI3KQ59H18 835 aa13□□□□□ -0.33
LITAF-216ENST00000574848 DCAF15Q66K64 600 aa13□□□□□ -0.33
LITAF-216ENST00000574848 CENPQQ7L2Z9 268 aaPredicted RBP13□□□□□ -0.33
LITAF-216ENST00000574848 DZIP1Q86YF9 867 aaKnown RBP13□□□□□ -0.33
LITAF-216ENST00000574848 IFNL1Q8IU54 200 aa13□□□□□ -0.33
LITAF-216ENST00000574848 SLF2Q8IX21 1173 aa13□□□□□ -0.33
LITAF-216ENST00000574848 OPTNQ96CV9 577 aa13□□□□□ -0.33
LITAF-216ENST00000574848 ZNF512BQ96KM6 892 aaPredicted RBP13□□□□□ -0.33
LITAF-216ENST00000574848 CHMP4BQ9H444 224 aaKnown RBP13□□□□□ -0.33
LITAF-216ENST00000574848 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
LITAF-216ENST00000574848 FPGT-TNNI3KV9GXZ4 949 aa13□□□□□ -0.33
LITAF-216ENST00000574848 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
LITAF-216ENST00000574848 IGSF3O75054 1194 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 UQCRFS1P1P0C7P4 283 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 MCAMP43121 646 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 SPATA5Q8NB90 893 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 PANK1Q8TE04 598 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 ZNF384Q8TF68 577 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 NEUROD6Q96NK8 337 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 ELP3Q9H9T3 547 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 CSADQ9Y600 493 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
LITAF-216ENST00000574848 FOCADQ5VW36 1801 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 GPR25O00155 361 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 ENTPD3O75355 529 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
LITAF-216ENST00000574848 SURF6O75683 361 aaKnown RBP12.98□□□□□ -0.33
LITAF-216ENST00000574848 TBC1D8O95759 1140 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 MAP4K4O95819 1239 aaPredicted RBP12.98□□□□□ -0.33
LITAF-216ENST00000574848 MECOMQ03112 1051 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 PI16Q6UXB8 463 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 CTU1Q7Z7A3 348 aaKnown RBP12.98□□□□□ -0.33
LITAF-216ENST00000574848 ZNF296Q8WUU4 475 aaPredicted RBP12.98□□□□□ -0.33
LITAF-216ENST00000574848 WRNIP1Q96S55 665 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 ZNF341Q9BYN7 854 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 USP40Q9NVE5 1235 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 ABCF2Q9UG63 623 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 ZNF112Q9UJU3 913 aa12.98□□□□□ -0.33
LITAF-216ENST00000574848 GPR75-ASB3A0A0A6YYF3 556 aa12.97□□□□□ -0.33
LITAF-216ENST00000574848 WDHD1O75717 1129 aaPredicted RBP12.97□□□□□ -0.33
LITAF-216ENST00000574848 NOL9Q5SY16 702 aaKnown RBP12.97□□□□□ -0.33
LITAF-216ENST00000574848 GORABQ5T7V8 394 aa12.97□□□□□ -0.33
LITAF-216ENST00000574848 ERO1BQ86YB8 467 aa12.97□□□□□ -0.33
LITAF-216ENST00000574848 NSUN4Q96CB9 384 aaKnown RBP12.97□□□□□ -0.33
LITAF-216ENST00000574848 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
LITAF-216ENST00000574848 DDX19BQ9UMR2 479 aa12.97□□□□□ -0.33
LITAF-216ENST00000574848 DOCK1Q14185 1865 aa12.97□□□□□ -0.33
LITAF-216ENST00000574848 CDK5RAP2Q96SN8 1893 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 BTDP43251 543 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 RGS3P49796 1198 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 GTF2A2P52657 109 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 RHBDL3P58872 404 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 GSTO1P78417 241 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 MAP3K10Q02779 954 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 TCP10Q12799 353 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms