RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-215	ENST00000574095	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	32.14	■■■□□ 2.74
NPLOC4-215	ENST00000574095	PDS5A	Q29RF7	1337 aa	Known RBP	32.14	■■■□□ 2.74
NPLOC4-215	ENST00000574095	MAP3K9	P80192	1104 aa		32.13	■■■□□ 2.73
NPLOC4-215	ENST00000574095	OS9	Q13438	667 aa	Predicted RBP	32.13	■■■□□ 2.73
NPLOC4-215	ENST00000574095	USP40	Q9NVE5	1235 aa		32.13	■■■□□ 2.73
NPLOC4-215	ENST00000574095	TCP10	Q12799	353 aa		32.12	■■■□□ 2.73
NPLOC4-215	ENST00000574095	DZIP1	Q86YF9	867 aa	Known RBP	32.12	■■■□□ 2.73
NPLOC4-215	ENST00000574095	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	32.12	■■■□□ 2.73
NPLOC4-215	ENST00000574095	HMG20B	Q9P0W2	317 aa		32.12	■■■□□ 2.73
NPLOC4-215	ENST00000574095	INHBE	P58166	350 aa		32.11	■■■□□ 2.73
NPLOC4-215	ENST00000574095	NFIA	Q12857	509 aa		32.11	■■■□□ 2.73
NPLOC4-215	ENST00000574095	PI16	Q6UXB8	463 aa		32.11	■■■□□ 2.73
NPLOC4-215	ENST00000574095	FAM151A	Q8WW52	585 aa		32.11	■■■□□ 2.73
NPLOC4-215	ENST00000574095	OPTN	Q96CV9	577 aa		32.11	■■■□□ 2.73
NPLOC4-215	ENST00000574095	AK9	Q5TCS8	1911 aa		32.1	■■■□□ 2.73
NPLOC4-215	ENST00000574095	VGLL4	Q14135	290 aa		32.1	■■■□□ 2.73
NPLOC4-215	ENST00000574095	SPTY2D1	Q68D10	685 aa	Predicted RBP	32.1	■■■□□ 2.73
NPLOC4-215	ENST00000574095	IFNL1	Q8IU54	200 aa		32.1	■■■□□ 2.73
NPLOC4-215	ENST00000574095	LAMB1	P07942	1786 aa		32.09	■■■□□ 2.73
NPLOC4-215	ENST00000574095	SPATA5	Q8NB90	893 aa		32.09	■■■□□ 2.73
NPLOC4-215	ENST00000574095	CNKSR2	Q8WXI2	1034 aa		32.09	■■■□□ 2.73
NPLOC4-215	ENST00000574095	R3HDML	Q9H3Y0	253 aa		32.09	■■■□□ 2.73
NPLOC4-215	ENST00000574095	CSAD	Q9Y600	493 aa		32.09	■■■□□ 2.73
NPLOC4-215	ENST00000574095	ARID4A	P29374	1257 aa	Predicted RBP	32.08	■■■□□ 2.73
NPLOC4-215	ENST00000574095	TNNI3K	Q59H18	835 aa		32.08	■■■□□ 2.73
NPLOC4-215	ENST00000574095	CEP85	Q6P2H3	762 aa		32.08	■■■□□ 2.73
NPLOC4-215	ENST00000574095	ERICH6	Q7L0X2	663 aa		32.08	■■■□□ 2.73
NPLOC4-215	ENST00000574095	MIGA2	Q7L4E1	593 aa		32.08	■■■□□ 2.73
NPLOC4-215	ENST00000574095	HOOK2	Q96ED9	719 aa		32.08	■■■□□ 2.73
NPLOC4-215	ENST00000574095	GPR108	Q9NPR9	543 aa		32.08	■■■□□ 2.73
NPLOC4-215	ENST00000574095	FAM198A	Q9UFP1	575 aa		32.08	■■■□□ 2.73
NPLOC4-215	ENST00000574095	FPGT-TNNI3K	V9GXZ4	949 aa		32.08	■■■□□ 2.73
NPLOC4-215	ENST00000574095	RPAP1	Q9BWH6	1393 aa	Predicted RBP	32.07	■■■□□ 2.73
NPLOC4-215	ENST00000574095	GAK	O14976	1311 aa		32.07	■■■□□ 2.72
NPLOC4-215	ENST00000574095	CCDC85C	A6NKD9	419 aa		32.07	■■■□□ 2.72
NPLOC4-215	ENST00000574095	MS4A1	P11836	297 aa		32.07	■■■□□ 2.72
NPLOC4-215	ENST00000574095	TBC1D9	Q6ZT07	1266 aa		32.07	■■■□□ 2.72
NPLOC4-215	ENST00000574095	ZNF296	Q8WUU4	475 aa	Predicted RBP	32.07	■■■□□ 2.72
NPLOC4-215	ENST00000574095	NOP58	Q9Y2X3	529 aa	Known RBP	32.07	■■■□□ 2.72
NPLOC4-215	ENST00000574095	GPR25	O00155	361 aa		32.06	■■■□□ 2.72
NPLOC4-215	ENST00000574095	IGF2BP3	O00425	579 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
NPLOC4-215	ENST00000574095	ALDH1A1	P00352	501 aa		32.06	■■■□□ 2.72
NPLOC4-215	ENST00000574095	MCAM	P43121	646 aa		32.06	■■■□□ 2.72
NPLOC4-215	ENST00000574095	MECOM	Q03112	1051 aa		32.06	■■■□□ 2.72
NPLOC4-215	ENST00000574095	SLF2	Q8IX21	1173 aa		32.06	■■■□□ 2.72
NPLOC4-215	ENST00000574095	WRNIP1	Q96S55	665 aa		32.06	■■■□□ 2.72
NPLOC4-215	ENST00000574095	DBNDD2	Q9BQY9	259 aa		32.06	■■■□□ 2.72
NPLOC4-215	ENST00000574095	UQCRFS1P1	P0C7P4	283 aa		32.05	■■■□□ 2.72
NPLOC4-215	ENST00000574095	DCAF15	Q66K64	600 aa		32.05	■■■□□ 2.72
NPLOC4-215	ENST00000574095	ZFPM1	Q8IX07	1006 aa		32.05	■■■□□ 2.72
NPLOC4-215	ENST00000574095	ZKSCAN4	Q969J2	545 aa	Predicted RBP	32.05	■■■□□ 2.72
NPLOC4-215	ENST00000574095	FAM163A	Q96GL9	167 aa	Predicted RBP	32.05	■■■□□ 2.72
NPLOC4-215	ENST00000574095	CFHR5	Q9BXR6	569 aa		32.05	■■■□□ 2.72
NPLOC4-215	ENST00000574095	RCAN3	Q9UKA8	241 aa		32.05	■■■□□ 2.72
NPLOC4-215	ENST00000574095	BTD	P43251	543 aa		32.03	■■■□□ 2.72
NPLOC4-215	ENST00000574095	TTC39A	Q5SRH9	613 aa		32.03	■■■□□ 2.72
NPLOC4-215	ENST00000574095	CTU1	Q7Z7A3	348 aa	Known RBP	32.03	■■■□□ 2.72
NPLOC4-215	ENST00000574095	ZNF384	Q8TF68	577 aa		32.03	■■■□□ 2.72
NPLOC4-215	ENST00000574095	OTUD5	Q96G74	571 aa		32.03	■■■□□ 2.72
NPLOC4-215	ENST00000574095	PTPN18	Q99952	460 aa		32.03	■■■□□ 2.72
NPLOC4-215	ENST00000574095	ZNF341	Q9BYN7	854 aa		32.03	■■■□□ 2.72
NPLOC4-215	ENST00000574095	SNCAIP	Q9Y6H5	919 aa		32.03	■■■□□ 2.72
NPLOC4-215	ENST00000574095	MROH7-TTC4	A0A0A0MT08	1334 aa		32.02	■■■□□ 2.72
NPLOC4-215	ENST00000574095	TESPA1	A2RU30	521 aa	Predicted RBP	32.02	■■■□□ 2.72
NPLOC4-215	ENST00000574095	RGS3	P49796	1198 aa		32.02	■■■□□ 2.72
NPLOC4-215	ENST00000574095	CCDC158	Q5M9N0	1113 aa		32.02	■■■□□ 2.72
NPLOC4-215	ENST00000574095	MS4A4A	Q96JQ5	239 aa		32.02	■■■□□ 2.72
NPLOC4-215	ENST00000574095	SNRK	Q9NRH2	765 aa		32.02	■■■□□ 2.72
NPLOC4-215	ENST00000574095	COG6	Q9Y2V7	657 aa		32.02	■■■□□ 2.72
NPLOC4-215	ENST00000574095	NOM1	Q5C9Z4	860 aa	Known RBP	32.01	■■■□□ 2.71
NPLOC4-215	ENST00000574095	IDI2	Q9BXS1	227 aa		32.01	■■■□□ 2.71
NPLOC4-215	ENST00000574095	RAI14	Q9P0K7	980 aa		32.01	■■■□□ 2.71
NPLOC4-215	ENST00000574095	OTUD7B	Q6GQQ9	843 aa		32	■■■□□ 2.71
NPLOC4-215	ENST00000574095	NSUN4	Q96CB9	384 aa	Known RBP	32	■■■□□ 2.71
NPLOC4-215	ENST00000574095	CCDC8	Q9H0W5	538 aa	Predicted RBP	32	■■■□□ 2.71
NPLOC4-215	ENST00000574095	GPR75-ASB3	A0A0A6YYF3	556 aa		31.99	■■■□□ 2.71
NPLOC4-215	ENST00000574095	SPDYE5	A6NIY4	337 aa		31.99	■■■□□ 2.71
NPLOC4-215	ENST00000574095	INPP5B	P32019	993 aa		31.99	■■■□□ 2.71
NPLOC4-215	ENST00000574095	EXOC6B	Q9Y2D4	811 aa		31.99	■■■□□ 2.71
NPLOC4-215	ENST00000574095	FKTN	O75072	461 aa		31.98	■■■□□ 2.71
NPLOC4-215	ENST00000574095	ENTPD3	O75355	529 aa		31.98	■■■□□ 2.71
NPLOC4-215	ENST00000574095	ERO1B	Q86YB8	467 aa		31.98	■■■□□ 2.71
NPLOC4-215	ENST00000574095	EAF2	Q96CJ1	260 aa	Predicted RBP	31.98	■■■□□ 2.71
NPLOC4-215	ENST00000574095	TLR7	Q9NYK1	1049 aa	Known RBP	31.98	■■■□□ 2.71
NPLOC4-215	ENST00000574095	LRP2BP	Q9P2M1	347 aa		31.98	■■■□□ 2.71
NPLOC4-215	ENST00000574095	DBNL	Q9UJU6	430 aa	Known RBP	31.98	■■■□□ 2.71
NPLOC4-215	ENST00000574095	CCL15-CCL14	A0A0B4J2E2	113 aa		31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	WDHD1	O75717	1129 aa	Predicted RBP	31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	LDHC	P07864	332 aa		31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	GTF2A2	P52657	109 aa		31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	GSTO1	P78417	241 aa		31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	PICALM	Q13492	652 aa		31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	CCL15	Q16663	113 aa		31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	BRI3BP	Q8WY22	251 aa		31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	DDX4	Q9NQI0	724 aa	Known RBP	31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	DDX19B	Q9UMR2	479 aa		31.97	■■■□□ 2.71
NPLOC4-215	ENST00000574095	RFX7	Q2KHR2	1363 aa		31.96	■■■□□ 2.71
NPLOC4-215	ENST00000574095	SH3BP5L	Q7L8J4	393 aa		31.96	■■■□□ 2.71
NPLOC4-215	ENST00000574095	ZNF112	Q9UJU3	913 aa		31.96	■■■□□ 2.71
NPLOC4-215	ENST00000574095	RHBDL3	P58872	404 aa		31.95	■■■□□ 2.71

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