RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 GNAI2P04899 355 aa12.41□□□□□ -0.42
RPA1-206ENST00000573994 ADORA1P30542 326 aa12.41□□□□□ -0.42
RPA1-206ENST00000573994 IL15P40933 162 aaPredicted RBP12.41□□□□□ -0.42
RPA1-206ENST00000573994 CRKP46108 304 aa12.41□□□□□ -0.42
RPA1-206ENST00000573994 FTSJ3Q8IY81 847 aaKnown RBP12.41□□□□□ -0.42
RPA1-206ENST00000573994 EFCAB3Q8N7B9 438 aa12.41□□□□□ -0.42
RPA1-206ENST00000573994 TBC1D22AQ8WUA7 517 aa12.41□□□□□ -0.42
RPA1-206ENST00000573994 TMEM121BQ9BXQ6 578 aaPredicted RBP12.41□□□□□ -0.42
RPA1-206ENST00000573994 TDRD3Q9H7E2 651 aaKnown RBP12.41□□□□□ -0.42
RPA1-206ENST00000573994 C1orf115Q9H7X2 142 aa12.41□□□□□ -0.42
RPA1-206ENST00000573994 COPRSQ9NQ92 184 aa12.41□□□□□ -0.42
RPA1-206ENST00000573994 SERPINA10Q9UK55 444 aa12.41□□□□□ -0.42
RPA1-206ENST00000573994 PNMA6EA0A0J9YXQ4 647 aa12.4□□□□□ -0.42
RPA1-206ENST00000573994 RLBP1P12271 317 aa12.4□□□□□ -0.42
RPA1-206ENST00000573994 PHKA1P46020 1223 aa12.4□□□□□ -0.42
RPA1-206ENST00000573994 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
RPA1-206ENST00000573994 DZIP1LQ8IYY4 767 aaKnown RBP12.4□□□□□ -0.42
RPA1-206ENST00000573994 RNF25Q96BH1 459 aaPredicted RBP12.4□□□□□ -0.42
RPA1-206ENST00000573994 ZNF70Q9UC06 446 aaPredicted RBP12.4□□□□□ -0.42
RPA1-206ENST00000573994 ANGEL1Q9UNK9 670 aaKnown RBP12.4□□□□□ -0.42
RPA1-206ENST00000573994 TCP10L2B9ZVM9 353 aa12.39□□□□□ -0.43
RPA1-206ENST00000573994 CACNB3P54284 484 aa12.39□□□□□ -0.43
RPA1-206ENST00000573994 TFCP2Q12800 502 aa12.39□□□□□ -0.43
RPA1-206ENST00000573994 MTX1Q13505 466 aa12.39□□□□□ -0.43
RPA1-206ENST00000573994 RASA3Q14644 834 aa12.39□□□□□ -0.43
RPA1-206ENST00000573994 ARMC9Q7Z3E5 817 aa12.39□□□□□ -0.43
RPA1-206ENST00000573994 CDAN1Q8IWY9 1227 aa12.39□□□□□ -0.43
RPA1-206ENST00000573994 PPP2R3BQ9Y5P8 575 aa12.39□□□□□ -0.43
RPA1-206ENST00000573994 CA12O43570 354 aa12.38□□□□□ -0.43
RPA1-206ENST00000573994 NBPF12Q5TAG4 269 aaPredicted RBP12.38□□□□□ -0.43
RPA1-206ENST00000573994 TEKT1Q969V4 418 aa12.38□□□□□ -0.43
RPA1-206ENST00000573994 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.38□□□□□ -0.43
RPA1-206ENST00000573994 PRDX5P30044 214 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 TIMM10P62072 90 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 TNFAIP1Q13829 316 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 DIXDC1Q155Q3 683 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 LCE2DQ5TA82 110 aaPredicted RBP12.37□□□□□ -0.43
RPA1-206ENST00000573994 CCDC102BQ68D86 513 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 CLMNQ96JQ2 1002 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 TMEM39BQ9GZU3 492 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 GNL3LQ9NVN8 582 aaKnown RBP12.37□□□□□ -0.43
RPA1-206ENST00000573994 MAST3O60307 1309 aa12.37□□□□□ -0.43
RPA1-206ENST00000573994 A0A1B0GUL7 405 aa12.36□□□□□ -0.43
RPA1-206ENST00000573994 TRPA1O75762 1119 aa12.36□□□□□ -0.43
RPA1-206ENST00000573994 SUPT20HL1Q3ZLR7 823 aa12.36□□□□□ -0.43
RPA1-206ENST00000573994 LDLRAD1Q5T700 205 aa12.36□□□□□ -0.43
RPA1-206ENST00000573994 PANK1Q8TE04 598 aa12.36□□□□□ -0.43
RPA1-206ENST00000573994 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
RPA1-206ENST00000573994 RNF186Q9NXI6 227 aa12.36□□□□□ -0.43
RPA1-206ENST00000573994 ECM29Q5VYK3 1845 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
RPA1-206ENST00000573994 ST18O60284 1047 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 HDLBPQ00341 1268 aaKnown RBP12.35□□□□□ -0.43
RPA1-206ENST00000573994 RASGRF1Q13972 1273 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 APOBEC3HQ6NTF7 200 aaKnown RBP12.35□□□□□ -0.43
RPA1-206ENST00000573994 XAGE2Q96GT9 111 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 TEPSINQ96N21 525 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 SAGE1Q9NXZ1 904 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 TMOD2Q9NZR1 351 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 DENND2AQ9ULE3 1009 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 DAGLAQ9Y4D2 1042 aa12.35□□□□□ -0.43
RPA1-206ENST00000573994 LDHBP07195 334 aaKnown RBP12.34□□□□□ -0.43
RPA1-206ENST00000573994 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
RPA1-206ENST00000573994 TNNI2P48788 182 aa12.34□□□□□ -0.43
RPA1-206ENST00000573994 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
RPA1-206ENST00000573994 OS9Q13438 667 aaPredicted RBP12.34□□□□□ -0.43
RPA1-206ENST00000573994 NEUROD6Q96NK8 337 aa12.34□□□□□ -0.43
RPA1-206ENST00000573994 AKAP2Q9Y2D5 859 aa12.34□□□□□ -0.43
RPA1-206ENST00000573994 SEMA3EO15041 775 aa12.33□□□□□ -0.44
RPA1-206ENST00000573994 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
RPA1-206ENST00000573994 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
RPA1-206ENST00000573994 SPRYD7Q5W111 196 aa12.33□□□□□ -0.44
RPA1-206ENST00000573994 HHIPL2Q6UWX4 724 aa12.33□□□□□ -0.44
RPA1-206ENST00000573994 PI16Q6UXB8 463 aa12.33□□□□□ -0.44
RPA1-206ENST00000573994 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
RPA1-206ENST00000573994 WNK4Q96J92 1243 aa12.33□□□□□ -0.44
RPA1-206ENST00000573994 MRIQ9BWK5 157 aa12.33□□□□□ -0.44
RPA1-206ENST00000573994 SALL1Q9NSC2 1324 aa12.33□□□□□ -0.44
RPA1-206ENST00000573994 ZBTB7BO15156 539 aaPredicted RBP12.32□□□□□ -0.44
RPA1-206ENST00000573994 USP2O75604 605 aaPredicted RBP12.32□□□□□ -0.44
RPA1-206ENST00000573994 GJA5P36382 358 aa12.32□□□□□ -0.44
RPA1-206ENST00000573994 GORABQ5T7V8 394 aa12.32□□□□□ -0.44
RPA1-206ENST00000573994 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
RPA1-206ENST00000573994 ABHD8Q96I13 439 aa12.32□□□□□ -0.44
RPA1-206ENST00000573994 ELP3Q9H9T3 547 aa12.32□□□□□ -0.44
RPA1-206ENST00000573994 ABCF2Q9UG63 623 aa12.32□□□□□ -0.44
RPA1-206ENST00000573994 MYH13Q9UKX3 1938 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 UNCXA6NJT0 531 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
RPA1-206ENST00000573994 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 ATP8B2P98198 1209 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 SREBF2Q12772 1141 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 NFIAQ12857 509 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 CDC42EP5Q6NZY7 148 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 SSH3Q8TE77 659 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms