RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 IRF6O14896 467 aa27.45■■□□□ 1.98
SNF8-216ENST00000573795 ATP2B3Q16720 1220 aa27.45■■□□□ 1.98
SNF8-216ENST00000573795 NOB1Q9ULX3 412 aaKnown RBP27.45■■□□□ 1.98
SNF8-216ENST00000573795 BTBD19C9JJ37 291 aa27.44■■□□□ 1.98
SNF8-216ENST00000573795 PPIL2Q13356 520 aa27.44■■□□□ 1.98
SNF8-216ENST00000573795 CDC42EP5Q6NZY7 148 aa27.44■■□□□ 1.98
SNF8-216ENST00000573795 MIGA2Q7L4E1 593 aa27.44■■□□□ 1.98
SNF8-216ENST00000573795 FAM151AQ8WW52 585 aa27.44■■□□□ 1.98
SNF8-216ENST00000573795 HOOK2Q96ED9 719 aa27.44■■□□□ 1.98
SNF8-216ENST00000573795 CETPP11597 493 aa27.43■■□□□ 1.98
SNF8-216ENST00000573795 INPP5BP32019 993 aa27.43■■□□□ 1.98
SNF8-216ENST00000573795 NFIAQ12857 509 aa27.43■■□□□ 1.98
SNF8-216ENST00000573795 DCAF15Q66K64 600 aa27.43■■□□□ 1.98
SNF8-216ENST00000573795 ZNF341Q9BYN7 854 aa27.43■■□□□ 1.98
SNF8-216ENST00000573795 PA2G4Q9UQ80 394 aaKnown RBP27.43■■□□□ 1.98
SNF8-216ENST00000573795 LRRFIP2Q9Y608 721 aaKnown RBP27.43■■□□□ 1.98
SNF8-216ENST00000573795 AK9Q5TCS8 1911 aa27.42■■□□□ 1.98
SNF8-216ENST00000573795 PHKA1P46020 1223 aa27.42■■□□□ 1.98
SNF8-216ENST00000573795 ZCCHC17Q9NP64 241 aaKnown RBP27.42■■□□□ 1.98
SNF8-216ENST00000573795 CEP126Q9P2H0 1117 aa27.42■■□□□ 1.98
SNF8-216ENST00000573795 SALL1Q9NSC2 1324 aa27.41■■□□□ 1.98
SNF8-216ENST00000573795 CT47B1P0C2W7 299 aaPredicted RBP27.41■■□□□ 1.98
SNF8-216ENST00000573795 SNAPC2Q13487 334 aa27.41■■□□□ 1.98
SNF8-216ENST00000573795 FAM198AQ9UFP1 575 aa27.41■■□□□ 1.98
SNF8-216ENST00000573795 ZNF112Q9UJU3 913 aa27.41■■□□□ 1.98
SNF8-216ENST00000573795 PTCH2Q9Y6C5 1203 aa27.41■■□□□ 1.98
SNF8-216ENST00000573795 MYH2Q9UKX2 1941 aa27.41■■□□□ 1.98
SNF8-216ENST00000573795 DOCK2Q92608 1830 aa27.4■■□□□ 1.98
SNF8-216ENST00000573795 TLR2O60603 784 aa27.4■■□□□ 1.98
SNF8-216ENST00000573795 TCP10Q12799 353 aa27.4■■□□□ 1.98
SNF8-216ENST00000573795 ZNF333Q96JL9 665 aa27.4■■□□□ 1.98
SNF8-216ENST00000573795 MEIS3Q99687 375 aa27.4■■□□□ 1.98
SNF8-216ENST00000573795 ARHGAP39Q9C0H5 1083 aa27.4■■□□□ 1.98
SNF8-216ENST00000573795 ZBTB22O15209 634 aa27.39■■□□□ 1.98
SNF8-216ENST00000573795 ADORA1P30542 326 aa27.39■■□□□ 1.98
SNF8-216ENST00000573795 IL15P40933 162 aaPredicted RBP27.39■■□□□ 1.98
SNF8-216ENST00000573795 PPATQ06203 517 aa27.39■■□□□ 1.98
SNF8-216ENST00000573795 API5Q9BZZ5 524 aaKnown RBP27.39■■□□□ 1.98
SNF8-216ENST00000573795 COPRSQ9NQ92 184 aa27.39■■□□□ 1.98
SNF8-216ENST00000573795 ATRNL1Q5VV63 1379 aa27.38■■□□□ 1.97
SNF8-216ENST00000573795 LDHBP07195 334 aaKnown RBP27.38■■□□□ 1.97
SNF8-216ENST00000573795 EN2P19622 333 aaPredicted RBP27.38■■□□□ 1.97
SNF8-216ENST00000573795 RFX7Q2KHR2 1363 aa27.37■■□□□ 1.97
SNF8-216ENST00000573795 SEMA3EO15041 775 aa27.37■■□□□ 1.97
SNF8-216ENST00000573795 ZFPM1Q8IX07 1006 aa27.37■■□□□ 1.97
SNF8-216ENST00000573795 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.37■■□□□ 1.97
SNF8-216ENST00000573795 GNL3LQ9NVN8 582 aaKnown RBP27.37■■□□□ 1.97
SNF8-216ENST00000573795 DENND2AQ9ULE3 1009 aa27.37■■□□□ 1.97
SNF8-216ENST00000573795 LACTBP83111 547 aaPredicted RBP27.36■■□□□ 1.97
SNF8-216ENST00000573795 MOGSQ13724 837 aa27.36■■□□□ 1.97
SNF8-216ENST00000573795 USP40Q9NVE5 1235 aa27.36■■□□□ 1.97
SNF8-216ENST00000573795 KCNH4Q9UQ05 1017 aa27.36■■□□□ 1.97
SNF8-216ENST00000573795 RARSP54136 660 aaKnown RBP27.35■■□□□ 1.97
SNF8-216ENST00000573795 ARHGEF6Q15052 776 aa27.35■■□□□ 1.97
SNF8-216ENST00000573795 NOL9Q5SY16 702 aaKnown RBP27.35■■□□□ 1.97
SNF8-216ENST00000573795 CCDC102BQ68D86 513 aa27.35■■□□□ 1.97
SNF8-216ENST00000573795 ADGRA2Q96PE1 1338 aa27.35■■□□□ 1.97
SNF8-216ENST00000573795 SLC9C1Q4G0N8 1177 aa27.34■■□□□ 1.97
SNF8-216ENST00000573795 C17orf99Q6UX52 265 aa27.34■■□□□ 1.97
SNF8-216ENST00000573795 GAKO14976 1311 aa27.34■■□□□ 1.97
SNF8-216ENST00000573795 CTGFP29279 349 aa27.33■■□□□ 1.97
SNF8-216ENST00000573795 RASGRF1Q13972 1273 aa27.33■■□□□ 1.97
SNF8-216ENST00000573795 ANKRD23Q86SG2 305 aa27.33■■□□□ 1.97
SNF8-216ENST00000573795 WDHD1O75717 1129 aaPredicted RBP27.32■■□□□ 1.96
SNF8-216ENST00000573795 TIMM10P62072 90 aa27.32■■□□□ 1.96
SNF8-216ENST00000573795 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.32■■□□□ 1.96
SNF8-216ENST00000573795 RGS3P49796 1198 aa27.31■■□□□ 1.96
SNF8-216ENST00000573795 SH3BP5LQ7L8J4 393 aa27.31■■□□□ 1.96
SNF8-216ENST00000573795 IDI2Q9BXS1 227 aa27.31■■□□□ 1.96
SNF8-216ENST00000573795 CPA4Q9UI42 421 aa27.31■■□□□ 1.96
SNF8-216ENST00000573795 HDAC5Q9UQL6 1122 aa27.31■■□□□ 1.96
SNF8-216ENST00000573795 PDS5AQ29RF7 1337 aaKnown RBP27.31■■□□□ 1.96
SNF8-216ENST00000573795 PHF20L1A8MW92 1017 aa27.3■■□□□ 1.96
SNF8-216ENST00000573795 PDHXO00330 501 aa27.3■■□□□ 1.96
SNF8-216ENST00000573795 SH3TC2Q8TF17 1288 aa27.3■■□□□ 1.96
SNF8-216ENST00000573795 PHIPQ8WWQ0 1821 aa27.3■■□□□ 1.96
SNF8-216ENST00000573795 PTPRFP10586 1907 aa27.29■■□□□ 1.96
SNF8-216ENST00000573795 MTX1Q13505 466 aa27.29■■□□□ 1.96
SNF8-216ENST00000573795 KIF22Q14807 665 aa27.29■■□□□ 1.96
SNF8-216ENST00000573795 NBPF11Q86T75 865 aa27.29■■□□□ 1.96
SNF8-216ENST00000573795 ARHGAP45Q92619 1136 aa27.29■■□□□ 1.96
SNF8-216ENST00000573795 TMEM106CQ9BVX2 250 aa27.29■■□□□ 1.96
SNF8-216ENST00000573795 PCDH10Q9P2E7 1040 aa27.29■■□□□ 1.96
SNF8-216ENST00000573795 DOCK1Q14185 1865 aa27.28■■□□□ 1.96
SNF8-216ENST00000573795 A0A1B0GUL7 405 aa27.28■■□□□ 1.96
SNF8-216ENST00000573795 ENTPD3O75355 529 aa27.28■■□□□ 1.96
SNF8-216ENST00000573795 SLURP2P0DP57 97 aa27.28■■□□□ 1.96
SNF8-216ENST00000573795 TFCP2Q12800 502 aa27.28■■□□□ 1.96
SNF8-216ENST00000573795 GPAT2Q6NUI2 795 aa27.28■■□□□ 1.96
SNF8-216ENST00000573795 ZGPATQ8N5A5 531 aaKnown RBP27.28■■□□□ 1.96
SNF8-216ENST00000573795 XAGE2Q96GT9 111 aa27.28■■□□□ 1.96
SNF8-216ENST00000573795 DDX4Q9NQI0 724 aaKnown RBP27.28■■□□□ 1.96
SNF8-216ENST00000573795 SRGAP3O43295 1099 aa27.27■■□□□ 1.96
SNF8-216ENST00000573795 ECM2O94769 699 aaPredicted RBP27.27■■□□□ 1.96
SNF8-216ENST00000573795 GNRH1P01148 92 aa27.27■■□□□ 1.96
SNF8-216ENST00000573795 ZNF384Q8TF68 577 aa27.27■■□□□ 1.96
SNF8-216ENST00000573795 FAM163AQ96GL9 167 aaPredicted RBP27.27■■□□□ 1.96
SNF8-216ENST00000573795 TRIM47Q96LD4 638 aa27.27■■□□□ 1.96
SNF8-216ENST00000573795 TNNQ9UQP3 1299 aa27.27■■□□□ 1.96
SNF8-216ENST00000573795 MYCP01106 439 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms