RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 SLF2Q8IX21 1173 aa20.12■□□□□ 0.81
RAB40B-208ENST00000573395 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
RAB40B-208ENST00000573395 FKTNO75072 461 aa20.11■□□□□ 0.81
RAB40B-208ENST00000573395 RASGRF1Q13972 1273 aa20.11■□□□□ 0.81
RAB40B-208ENST00000573395 VGLL4Q14135 290 aa20.11■□□□□ 0.81
RAB40B-208ENST00000573395 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.11■□□□□ 0.81
RAB40B-208ENST00000573395 WRNIP1Q96S55 665 aa20.11■□□□□ 0.81
RAB40B-208ENST00000573395 USP40Q9NVE5 1235 aa20.11■□□□□ 0.81
RAB40B-208ENST00000573395 TCP10Q12799 353 aa20.1■□□□□ 0.81
RAB40B-208ENST00000573395 NOM1Q5C9Z4 860 aaKnown RBP20.1■□□□□ 0.81
RAB40B-208ENST00000573395 CDC42EP5Q6NZY7 148 aa20.1■□□□□ 0.81
RAB40B-208ENST00000573395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.1■□□□□ 0.81
RAB40B-208ENST00000573395 FAM151AQ8WW52 585 aa20.1■□□□□ 0.81
RAB40B-208ENST00000573395 CFHR5Q9BXR6 569 aa20.1■□□□□ 0.81
RAB40B-208ENST00000573395 IGF2BP3O00425 579 aaKnown RBP eCLIP20.09■□□□□ 0.81
RAB40B-208ENST00000573395 GJA5P36382 358 aa20.09■□□□□ 0.81
RAB40B-208ENST00000573395 PKN2Q16513 984 aaKnown RBP20.09■□□□□ 0.81
RAB40B-208ENST00000573395 OTUD5Q96G74 571 aa20.09■□□□□ 0.81
RAB40B-208ENST00000573395 ZNF341Q9BYN7 854 aa20.09■□□□□ 0.81
RAB40B-208ENST00000573395 RPAP1Q9BWH6 1393 aaPredicted RBP20.08■□□□□ 0.81
RAB40B-208ENST00000573395 PDS5AQ29RF7 1337 aaKnown RBP20.08■□□□□ 0.81
RAB40B-208ENST00000573395 GTF2A2P52657 109 aa20.08■□□□□ 0.81
RAB40B-208ENST00000573395 ZBTB22O15209 634 aa20.07■□□□□ 0.8
RAB40B-208ENST00000573395 ERICH6Q7L0X2 663 aa20.07■□□□□ 0.8
RAB40B-208ENST00000573395 MIGA2Q7L4E1 593 aa20.07■□□□□ 0.8
RAB40B-208ENST00000573395 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
RAB40B-208ENST00000573395 R3HDMLQ9H3Y0 253 aa20.07■□□□□ 0.8
RAB40B-208ENST00000573395 C1orf115Q9H7X2 142 aa20.07■□□□□ 0.8
RAB40B-208ENST00000573395 CCL15-CCL14A0A0B4J2E2 113 aa20.06■□□□□ 0.8
RAB40B-208ENST00000573395 WDHD1O75717 1129 aaPredicted RBP20.06■□□□□ 0.8
RAB40B-208ENST00000573395 ATP8B2P98198 1209 aa20.06■□□□□ 0.8
RAB40B-208ENST00000573395 NFIAQ12857 509 aa20.06■□□□□ 0.8
RAB40B-208ENST00000573395 CCL15Q16663 113 aa20.06■□□□□ 0.8
RAB40B-208ENST00000573395 ERO1BQ86YB8 467 aa20.06■□□□□ 0.8
RAB40B-208ENST00000573395 SPDYE5A6NIY4 337 aa20.05■□□□□ 0.8
RAB40B-208ENST00000573395 SURF6O75683 361 aaKnown RBP20.05■□□□□ 0.8
RAB40B-208ENST00000573395 UQCRFS1P1P0C7P4 283 aa20.05■□□□□ 0.8
RAB40B-208ENST00000573395 MLLT1Q03111 559 aaPredicted RBP20.05■□□□□ 0.8
RAB40B-208ENST00000573395 POLA2Q14181 598 aa20.05■□□□□ 0.8
RAB40B-208ENST00000573395 ZSCAN29Q8IWY8 852 aaPredicted RBP20.05■□□□□ 0.8
RAB40B-208ENST00000573395 SPATA5Q8NB90 893 aa20.05■□□□□ 0.8
RAB40B-208ENST00000573395 ZKSCAN4Q969J2 545 aaPredicted RBP20.05■□□□□ 0.8
RAB40B-208ENST00000573395 HMG20BQ9P0W2 317 aa20.05■□□□□ 0.8
RAB40B-208ENST00000573395 OTOFQ9HC10 1997 aa20.04■□□□□ 0.8
RAB40B-208ENST00000573395 TESPA1A2RU30 521 aaPredicted RBP20.04■□□□□ 0.8
RAB40B-208ENST00000573395 GSTO1P78417 241 aa20.04■□□□□ 0.8
RAB40B-208ENST00000573395 CRHR2Q13324 411 aa20.04■□□□□ 0.8
RAB40B-208ENST00000573395 SSH3Q8TE77 659 aa20.04■□□□□ 0.8
RAB40B-208ENST00000573395 MS4A4AQ96JQ5 239 aa20.04■□□□□ 0.8
RAB40B-208ENST00000573395 RAI14Q9P0K7 980 aa20.04■□□□□ 0.8
RAB40B-208ENST00000573395 SNCAIPQ9Y6H5 919 aa20.04■□□□□ 0.8
RAB40B-208ENST00000573395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.04■□□□□ 0.8
RAB40B-208ENST00000573395 GAKO14976 1311 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 ZBTB7BO15156 539 aaPredicted RBP20.03■□□□□ 0.8
RAB40B-208ENST00000573395 LDHCP07864 332 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 CETPP11597 493 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 MS4A1P11836 297 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 RLBP1P12271 317 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 BTDP43251 543 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 RGS3P49796 1198 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 MECOMQ03112 1051 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 CCDC158Q5M9N0 1113 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 TTC39AQ5SRH9 613 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 BRI3BPQ8WY22 251 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 ERO1AQ96HE7 468 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 PTPN18Q99952 460 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 FAM198AQ9UFP1 575 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 HPS5Q9UPZ3 1129 aa20.03■□□□□ 0.8
RAB40B-208ENST00000573395 MROH7-TTC4A0A0A0MT08 1334 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 ENTPD3O75355 529 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 ARID4AP29374 1257 aaPredicted RBP20.02■□□□□ 0.8
RAB40B-208ENST00000573395 INPP5BP32019 993 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 SNAPC2Q13487 334 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 TAF1CQ15572 869 aaPredicted RBP20.02■□□□□ 0.8
RAB40B-208ENST00000573395 TNNI3KQ59H18 835 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 FBXO46Q6PJ61 603 aaPredicted RBP20.02■□□□□ 0.8
RAB40B-208ENST00000573395 ZFYVE28Q9HCC9 887 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 GPR108Q9NPR9 543 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 LRP2BPQ9P2M1 347 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 TRIM17Q9Y577 477 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 FPGT-TNNI3KV9GXZ4 949 aa20.02■□□□□ 0.8
RAB40B-208ENST00000573395 PPIL2Q13356 520 aa20.01■□□□□ 0.79
RAB40B-208ENST00000573395 PICALMQ13492 652 aa20.01■□□□□ 0.79
RAB40B-208ENST00000573395 PI16Q6UXB8 463 aa20.01■□□□□ 0.79
RAB40B-208ENST00000573395 TBC1D9Q6ZT07 1266 aa20.01■□□□□ 0.79
RAB40B-208ENST00000573395 FAM163AQ96GL9 167 aaPredicted RBP20.01■□□□□ 0.79
RAB40B-208ENST00000573395 NOL10Q9BSC4 688 aaKnown RBP20.01■□□□□ 0.79
RAB40B-208ENST00000573395 IDI2Q9BXS1 227 aa20.01■□□□□ 0.79
RAB40B-208ENST00000573395 IRF6O14896 467 aa20■□□□□ 0.79
RAB40B-208ENST00000573395 RGS19P49795 217 aa20■□□□□ 0.79
RAB40B-208ENST00000573395 SOX10P56693 466 aa20■□□□□ 0.79
RAB40B-208ENST00000573395 PPATQ06203 517 aa20■□□□□ 0.79
RAB40B-208ENST00000573395 ZFPM1Q8IX07 1006 aa20■□□□□ 0.79
RAB40B-208ENST00000573395 PANK1Q8TE04 598 aa20■□□□□ 0.79
RAB40B-208ENST00000573395 MCAMP43121 646 aa19.99■□□□□ 0.79
RAB40B-208ENST00000573395 SP3Q02447 781 aa19.99■□□□□ 0.79
RAB40B-208ENST00000573395 DBNDD2Q9BQY9 259 aa19.99■□□□□ 0.79
RAB40B-208ENST00000573395 SNRKQ9NRH2 765 aa19.99■□□□□ 0.79
RAB40B-208ENST00000573395 AK9Q5TCS8 1911 aa19.98■□□□□ 0.79
RAB40B-208ENST00000573395 MYH2Q9UKX2 1941 aa19.98■□□□□ 0.79
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