RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 USP2O75604 605 aaPredicted RBP14.54□□□□□ -0.08
NDE1-206ENST00000572967 HDLBPQ00341 1268 aaKnown RBP14.54□□□□□ -0.08
NDE1-206ENST00000572967 OS9Q13438 667 aaPredicted RBP14.54□□□□□ -0.08
NDE1-206ENST00000572967 POLA2Q14181 598 aa14.54□□□□□ -0.08
NDE1-206ENST00000572967 CENPQQ7L2Z9 268 aaPredicted RBP14.54□□□□□ -0.08
NDE1-206ENST00000572967 SUGT1Q9Y2Z0 365 aa14.54□□□□□ -0.08
NDE1-206ENST00000572967 RPAP1Q9BWH6 1393 aaPredicted RBP14.54□□□□□ -0.08
NDE1-206ENST00000572967 MANSC4A6NHS7 340 aaPredicted RBP14.53□□□□□ -0.08
NDE1-206ENST00000572967 ZBTB48P10074 688 aaPredicted RBP14.53□□□□□ -0.08
NDE1-206ENST00000572967 TM4SF4P48230 202 aa14.53□□□□□ -0.08
NDE1-206ENST00000572967 TFCP2Q12800 502 aa14.53□□□□□ -0.08
NDE1-206ENST00000572967 APOBEC3HQ6NTF7 200 aaKnown RBP14.53□□□□□ -0.08
NDE1-206ENST00000572967 CTU1Q7Z7A3 348 aaKnown RBP14.53□□□□□ -0.08
NDE1-206ENST00000572967 ANKRD13AQ8IZ07 590 aa14.53□□□□□ -0.08
NDE1-206ENST00000572967 ZNF296Q8WUU4 475 aaPredicted RBP14.53□□□□□ -0.08
NDE1-206ENST00000572967 OPTNQ96CV9 577 aa14.53□□□□□ -0.08
NDE1-206ENST00000572967 GNL3LQ9NVN8 582 aaKnown RBP14.53□□□□□ -0.08
NDE1-206ENST00000572967 DAGLAQ9Y4D2 1042 aa14.53□□□□□ -0.08
NDE1-206ENST00000572967 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.53□□□□□ -0.08
NDE1-206ENST00000572967 ZSWIM8A7E2V4 1837 aa14.52□□□□□ -0.08
NDE1-206ENST00000572967 PNMA6EA0A0J9YXQ4 647 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 IGF2BP3O00425 579 aaKnown RBP eCLIP14.52□□□□□ -0.09
NDE1-206ENST00000572967 RAB11FIP3O75154 756 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 G3BP1Q13283 466 aaKnown RBP eCLIP14.52□□□□□ -0.09
NDE1-206ENST00000572967 RASGRF1Q13972 1273 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 VGLL4Q14135 290 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 CCDC102BQ68D86 513 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 IFNL1Q8IU54 200 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 R3HDMLQ9H3Y0 253 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 DENND2AQ9ULE3 1009 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 DOCK1Q14185 1865 aa14.52□□□□□ -0.09
NDE1-206ENST00000572967 MYO5AQ9Y4I1 1855 aaKnown RBP14.52□□□□□ -0.09
NDE1-206ENST00000572967 A0A1B0GUL7 405 aa14.51□□□□□ -0.09
NDE1-206ENST00000572967 GPR25O00155 361 aa14.51□□□□□ -0.09
NDE1-206ENST00000572967 SURF6O75683 361 aaKnown RBP14.51□□□□□ -0.09
NDE1-206ENST00000572967 LDHBP07195 334 aaKnown RBP14.51□□□□□ -0.09
NDE1-206ENST00000572967 HHIPL2Q6UWX4 724 aa14.51□□□□□ -0.09
NDE1-206ENST00000572967 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.51□□□□□ -0.09
NDE1-206ENST00000572967 SALL1Q9NSC2 1324 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 SEMA3EO15041 775 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 TIMM10P62072 90 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 TCP10Q12799 353 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.5□□□□□ -0.09
NDE1-206ENST00000572967 DZIP1Q86YF9 867 aaKnown RBP14.5□□□□□ -0.09
NDE1-206ENST00000572967 OTUD5Q96G74 571 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 XAGE2Q96GT9 111 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 WRNIP1Q96S55 665 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 DCTPP1Q9H773 170 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 NOP58Q9Y2X3 529 aaKnown RBP14.5□□□□□ -0.09
NDE1-206ENST00000572967 CSADQ9Y600 493 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 CDK5RAP2Q96SN8 1893 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 ATAD5Q96QE3 1844 aa14.5□□□□□ -0.09
NDE1-206ENST00000572967 RFX7Q2KHR2 1363 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 SOX10P56693 466 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 NFIAQ12857 509 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 CDC42EP5Q6NZY7 148 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 FAM83AQ86UY5 434 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 SIRT2Q8IXJ6 389 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 KIF1BPQ96EK5 621 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 ABCF2Q9UG63 623 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 AKAP2Q9Y2D5 859 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 SNCAIPQ9Y6H5 919 aa14.49□□□□□ -0.09
NDE1-206ENST00000572967 UNCXA6NJT0 531 aa14.48□□□□□ -0.09
NDE1-206ENST00000572967 FKTNO75072 461 aa14.48□□□□□ -0.09
NDE1-206ENST00000572967 ALDH1A1P00352 501 aa14.48□□□□□ -0.09
NDE1-206ENST00000572967 PI16Q6UXB8 463 aa14.48□□□□□ -0.09
NDE1-206ENST00000572967 SMC5Q8IY18 1101 aa14.48□□□□□ -0.09
NDE1-206ENST00000572967 NEUROD6Q96NK8 337 aa14.48□□□□□ -0.09
NDE1-206ENST00000572967 CFHR5Q9BXR6 569 aa14.48□□□□□ -0.09
NDE1-206ENST00000572967 PTPRFP10586 1907 aa14.48□□□□□ -0.09
NDE1-206ENST00000572967 FOCADQ5VW36 1801 aa14.48□□□□□ -0.09
NDE1-206ENST00000572967 PDS5AQ29RF7 1337 aaKnown RBP14.47□□□□□ -0.09
NDE1-206ENST00000572967 MAP3K9P80192 1104 aa14.47□□□□□ -0.09
NDE1-206ENST00000572967 CRHR2Q13324 411 aa14.47□□□□□ -0.09
NDE1-206ENST00000572967 FKBP1CQ5VVH2 108 aa14.47□□□□□ -0.09
NDE1-206ENST00000572967 DCAF15Q66K64 600 aa14.47□□□□□ -0.09
NDE1-206ENST00000572967 B4GALNT3Q6L9W6 998 aa14.47□□□□□ -0.09
NDE1-206ENST00000572967 MIGA2Q7L4E1 593 aa14.47□□□□□ -0.09
NDE1-206ENST00000572967 ZGPATQ8N5A5 531 aaKnown RBP14.47□□□□□ -0.09
NDE1-206ENST00000572967 MRIQ9BWK5 157 aa14.47□□□□□ -0.09
NDE1-206ENST00000572967 LRRCC1Q9C099 1032 aa14.47□□□□□ -0.09
NDE1-206ENST00000572967 HPS5Q9UPZ3 1129 aa14.47□□□□□ -0.09
NDE1-206ENST00000572967 GAKO14976 1311 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 PHIPQ8WWQ0 1821 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 CCL15-CCL14A0A0B4J2E2 113 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 SPDYE5A6NIY4 337 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 CCL15Q16663 113 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 GORABQ5T7V8 394 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 CLASRPQ8N2M8 674 aaKnown RBP14.46□□□□□ -0.09
NDE1-206ENST00000572967 BRI3BPQ8WY22 251 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 ZKSCAN4Q969J2 545 aaPredicted RBP14.46□□□□□ -0.09
NDE1-206ENST00000572967 PTPN18Q99952 460 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 USP40Q9NVE5 1235 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 FAM198AQ9UFP1 575 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 EXOC6BQ9Y2D4 811 aa14.46□□□□□ -0.09
NDE1-206ENST00000572967 SIPA1L1O43166 1804 aa14.45□□□□□ -0.1
NDE1-206ENST00000572967 MROH7-TTC4A0A0A0MT08 1334 aa14.45□□□□□ -0.1
NDE1-206ENST00000572967 INPP5BP32019 993 aa14.45□□□□□ -0.1
NDE1-206ENST00000572967 BTDP43251 543 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms