RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ARHGAP39Q9C0H5 1083 aa12.36□□□□□ -0.43
TRAPPC1-205ENST00000572656 SLC5A1P13866 664 aa12.35□□□□□ -0.43
TRAPPC1-205ENST00000572656 RFX5P48382 616 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC1-205ENST00000572656 PRMT2P55345 433 aa12.35□□□□□ -0.43
TRAPPC1-205ENST00000572656 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
TRAPPC1-205ENST00000572656 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
TRAPPC1-205ENST00000572656 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 OTOFQ9HC10 1997 aa12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 ZNF316A6NFI3 1004 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 E9PSI1 815 aa12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 INPP5BP32019 993 aa12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 C17orf99Q6UX52 265 aa12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 ANKRD23Q86SG2 305 aa12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 SH3TC2Q8TF17 1288 aa12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 KCNH4Q9UQ05 1017 aa12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 DAGLAQ9Y4D2 1042 aa12.34□□□□□ -0.43
TRAPPC1-205ENST00000572656 PDHXO00330 501 aa12.33□□□□□ -0.44
TRAPPC1-205ENST00000572656 MYCP01106 439 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-205ENST00000572656 ZEB1P37275 1124 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-205ENST00000572656 TCP10Q12799 353 aa12.33□□□□□ -0.44
TRAPPC1-205ENST00000572656 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
TRAPPC1-205ENST00000572656 ATG9AQ7Z3C6 839 aa12.33□□□□□ -0.44
TRAPPC1-205ENST00000572656 GNL3LQ9NVN8 582 aaKnown RBP12.33□□□□□ -0.44
TRAPPC1-205ENST00000572656 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
TRAPPC1-205ENST00000572656 MKI67P46013 3256 aaKnown RBP12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 LDHBP07195 334 aaKnown RBP12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 PSMC4P43686 418 aa12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 NFIAQ12857 509 aa12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 DIXDC1Q155Q3 683 aa12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 NOL9Q5SY16 702 aaKnown RBP12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 USP40Q9NVE5 1235 aa12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 SRRDQ9UH36 339 aa12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 CPA4Q9UI42 421 aa12.32□□□□□ -0.44
TRAPPC1-205ENST00000572656 RBBP6Q7Z6E9 1792 aaKnown RBP12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 CENPFP49454 3210 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 CIAO1O76071 339 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 HOXD10P28358 340 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 CTGFP29279 349 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 PRDX5P30044 214 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 SLFN5Q08AF3 891 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 MOGSQ13724 837 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 ATP2B3Q16720 1220 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 ALDH1L2Q3SY69 923 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 TRIM47Q96LD4 638 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 ADGRA2Q96PE1 1338 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 SALL1Q9NSC2 1324 aa12.31□□□□□ -0.44
TRAPPC1-205ENST00000572656 CXCL11O14625 94 aa12.3□□□□□ -0.44
TRAPPC1-205ENST00000572656 SEMA3EO15041 775 aa12.3□□□□□ -0.44
TRAPPC1-205ENST00000572656 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC1-205ENST00000572656 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC1-205ENST00000572656 FXR1P51114 621 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAPPC1-205ENST00000572656 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
TRAPPC1-205ENST00000572656 SIL1Q9H173 461 aa12.3□□□□□ -0.44
TRAPPC1-205ENST00000572656 DENND2AQ9ULE3 1009 aa12.3□□□□□ -0.44
TRAPPC1-205ENST00000572656 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC1-205ENST00000572656 ZBTB22O15209 634 aa12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 OSBPP22059 807 aa12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 GRK4P32298 578 aa12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 MTFR1Q15390 333 aa12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 GPAT2Q6NUI2 795 aa12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 RAET1EQ8TD07 263 aa12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 PARK7Q99497 189 aaKnown RBP12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 SMC4Q9NTJ3 1288 aa12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 HDAC5Q9UQL6 1122 aa12.29□□□□□ -0.44
TRAPPC1-205ENST00000572656 BRCA2P51587 3418 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 PHF20L1A8MW92 1017 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 H0YGN5 161 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 ENTPD3O75355 529 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 PHKA1P46020 1223 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 SCYL3Q8IZE3 742 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 ZGPATQ8N5A5 531 aaKnown RBP12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 SHISA4Q96DD7 197 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 IDI2Q9BXS1 227 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 ZHX2Q9Y6X8 837 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 MYPNQ86TC9 1320 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 ATRNL1Q5VV63 1379 aa12.28□□□□□ -0.44
TRAPPC1-205ENST00000572656 A0A0G2JLL6 359 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 CYP2C8P10632 490 aa12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 BCRP11274 1271 aa12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 RGS3P49796 1198 aa12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 FCGRTP55899 365 aa12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 MAP3K10Q02779 954 aa12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 FASTKD5Q7L8L6 764 aaKnown RBP12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 PRRT2Q7Z6L0 340 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 COPRSQ9NQ92 184 aa12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 PICK1Q9NRD5 415 aa12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 GAKO14976 1311 aa12.27□□□□□ -0.45
TRAPPC1-205ENST00000572656 GJB1P08034 283 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 CCL5P13501 91 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 PTPRAP18433 802 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 ADORA1P30542 326 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 GJA8P48165 433 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 UBXN2AP68543 259 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms