RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 DLGAP5Q15398 846 aa10.73□□□□□ -0.69
SMG6-210ENST00000572205 HHIPL2Q6UWX4 724 aa10.73□□□□□ -0.69
SMG6-210ENST00000572205 APOBEC3FQ8IUX4 373 aaKnown RBP10.73□□□□□ -0.69
SMG6-210ENST00000572205 RPAP2Q8IXW5 612 aaPredicted RBP10.73□□□□□ -0.69
SMG6-210ENST00000572205 WDR66Q8TBY9 1149 aa10.73□□□□□ -0.69
SMG6-210ENST00000572205 ZNF512BQ96KM6 892 aaPredicted RBP10.73□□□□□ -0.69
SMG6-210ENST00000572205 CAPNS2Q96L46 248 aa10.73□□□□□ -0.69
SMG6-210ENST00000572205 ZNF70Q9UC06 446 aaPredicted RBP10.73□□□□□ -0.69
SMG6-210ENST00000572205 HDAC9Q9UKV0 1011 aa10.73□□□□□ -0.69
SMG6-210ENST00000572205 DENND2AQ9ULE3 1009 aa10.73□□□□□ -0.69
SMG6-210ENST00000572205 AKAP2Q9Y2D5 859 aa10.73□□□□□ -0.69
SMG6-210ENST00000572205 WDR33Q9C0J8 1336 aaKnown RBP10.73□□□□□ -0.69
SMG6-210ENST00000572205 COL2A1P02458 1487 aaPredicted RBP10.73□□□□□ -0.69
SMG6-210ENST00000572205 LOC285556D6RIA3 1793 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 CENPFP49454 3210 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 AOC2O75106 756 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 CACNB3P54284 484 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 DEFB115Q30KQ5 88 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 VPS37DQ86XT2 251 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 RASAL3Q86YV0 1011 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 DEFB129Q9H1M3 183 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 TDRD3Q9H7E2 651 aaKnown RBP10.72□□□□□ -0.69
SMG6-210ENST00000572205 ZNF408Q9H9D4 720 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 PCDHB15Q9Y5E8 787 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 AK9Q5TCS8 1911 aa10.72□□□□□ -0.69
SMG6-210ENST00000572205 BRCA2P51587 3418 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 ZSWIM8A7E2V4 1837 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 MAST3O60307 1309 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 CYP2E1P05181 493 aaPredicted RBP10.71□□□□□ -0.69
SMG6-210ENST00000572205 SLC10A3P09131 477 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 HUNKP57058 714 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 RHBDL3P58872 404 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 NFIAQ12857 509 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 G3BP1Q13283 466 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMG6-210ENST00000572205 LDLRAD1Q5T700 205 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 SPATA5Q8NB90 893 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 RHPN1Q8TCX5 695 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 TEKT1Q969V4 418 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 ABT1Q9ULW3 272 aaKnown RBP10.71□□□□□ -0.69
SMG6-210ENST00000572205 PPP2R3BQ9Y5P8 575 aa10.71□□□□□ -0.69
SMG6-210ENST00000572205 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
SMG6-210ENST00000572205 MROH7-TTC4A0A0A0MT08 1334 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 SALL3Q9BXA9 1300 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 HSPA1AP0DMV8 641 aaKnown RBP10.7□□□□□ -0.7
SMG6-210ENST00000572205 HSPA1BP0DMV9 641 aaKnown RBP10.7□□□□□ -0.7
SMG6-210ENST00000572205 FKBP1BP68106 108 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 RASA3Q14644 834 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 NBPF12Q5TAG4 269 aaPredicted RBP10.7□□□□□ -0.7
SMG6-210ENST00000572205 FKBP1CQ5VVH2 108 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 TBC1D9Q6ZT07 1266 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 POTEDQ86YR6 584 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 NSUN4Q96CB9 384 aaKnown RBP10.7□□□□□ -0.7
SMG6-210ENST00000572205 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
SMG6-210ENST00000572205 CRBNQ96SW2 442 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 TMEM39BQ9GZU3 492 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 CCDC8Q9H0W5 538 aaPredicted RBP10.7□□□□□ -0.7
SMG6-210ENST00000572205 PIH1D3Q9NQM4 214 aaKnown RBP10.7□□□□□ -0.7
SMG6-210ENST00000572205 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 NDUFB9Q9Y6M9 179 aa10.7□□□□□ -0.7
SMG6-210ENST00000572205 CASP8AP2Q9UKL3 1982 aa10.69□□□□□ -0.7
SMG6-210ENST00000572205 MYH8P13535 1937 aa10.69□□□□□ -0.7
SMG6-210ENST00000572205 GREB1LQ9C091 1923 aaPredicted RBP10.69□□□□□ -0.7
SMG6-210ENST00000572205 FOXN1O15353 648 aa10.69□□□□□ -0.7
SMG6-210ENST00000572205 WDHD1O75717 1129 aaPredicted RBP10.69□□□□□ -0.7
SMG6-210ENST00000572205 MECOMQ03112 1051 aa10.69□□□□□ -0.7
SMG6-210ENST00000572205 CDC42EP5Q6NZY7 148 aa10.69□□□□□ -0.7
SMG6-210ENST00000572205 SH3BP5LQ7L8J4 393 aa10.69□□□□□ -0.7
SMG6-210ENST00000572205 NEUROD6Q96NK8 337 aa10.69□□□□□ -0.7
SMG6-210ENST00000572205 IL1RAPL2Q9NP60 686 aa10.69□□□□□ -0.7
SMG6-210ENST00000572205 DDX4Q9NQI0 724 aaKnown RBP10.69□□□□□ -0.7
SMG6-210ENST00000572205 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
SMG6-210ENST00000572205 LDHBP07195 334 aaKnown RBP10.68□□□□□ -0.7
SMG6-210ENST00000572205 GJA5P36382 358 aa10.68□□□□□ -0.7
SMG6-210ENST00000572205 ZAP70P43403 619 aa10.68□□□□□ -0.7
SMG6-210ENST00000572205 RGMBQ6NW40 437 aa10.68□□□□□ -0.7
SMG6-210ENST00000572205 FAM83AQ86UY5 434 aa10.68□□□□□ -0.7
SMG6-210ENST00000572205 ZFPM1Q8IX07 1006 aa10.68□□□□□ -0.7
SMG6-210ENST00000572205 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.68□□□□□ -0.7
SMG6-210ENST00000572205 CLMNQ96JQ2 1002 aa10.68□□□□□ -0.7
SMG6-210ENST00000572205 ANTXR1Q9H6X2 564 aa10.68□□□□□ -0.7
SMG6-210ENST00000572205 VEZTQ9HBM0 779 aa10.68□□□□□ -0.7
SMG6-210ENST00000572205 SNRKQ9NRH2 765 aa10.68□□□□□ -0.7
SMG6-210ENST00000572205 GNL3LQ9NVN8 582 aaKnown RBP10.68□□□□□ -0.7
SMG6-210ENST00000572205 GPR75-ASB3A0A0A6YYF3 556 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 TCP10L2B9ZVM9 353 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 UBE2Q2LH0YL09 131 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 FRAT2O75474 233 aaPredicted RBP10.67□□□□□ -0.7
SMG6-210ENST00000572205 UQCRFS1P1P0C7P4 283 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 SLURP2P0DP57 97 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 AACSQ86V21 672 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 ERC1Q8IUD2 1116 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMG6-210ENST00000572205 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 IDI2Q9BXS1 227 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 DCTPP1Q9H773 170 aa10.67□□□□□ -0.7
SMG6-210ENST00000572205 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
SMG6-210ENST00000572205 PARP14Q460N5 1801 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms