RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
RPAIN-211ENST00000572174 APOBEC3HQ6NTF7 200 aaKnown RBP17■□□□□ 0.31
RPAIN-211ENST00000572174 CCDC102AQ96A19 550 aa17■□□□□ 0.31
RPAIN-211ENST00000572174 GCC1Q96CN9 775 aa17■□□□□ 0.31
RPAIN-211ENST00000572174 CAPNS2Q96L46 248 aa17■□□□□ 0.31
RPAIN-211ENST00000572174 PCDHAC2Q9Y5I4 1007 aa17■□□□□ 0.31
RPAIN-211ENST00000572174 OTOFQ9HC10 1997 aa17■□□□□ 0.31
RPAIN-211ENST00000572174 WDR33Q9C0J8 1336 aaKnown RBP16.99■□□□□ 0.31
RPAIN-211ENST00000572174 BAG3O95817 575 aa16.99■□□□□ 0.31
RPAIN-211ENST00000572174 IREB2P48200 963 aaKnown RBP16.99■□□□□ 0.31
RPAIN-211ENST00000572174 MAP3K12Q12852 859 aa16.99■□□□□ 0.31
RPAIN-211ENST00000572174 HDAC1Q13547 482 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-211ENST00000572174 PI16Q6UXB8 463 aa16.99■□□□□ 0.31
RPAIN-211ENST00000572174 PCDHB15Q9Y5E8 787 aa16.99■□□□□ 0.31
RPAIN-211ENST00000572174 TCP10L2B9ZVM9 353 aa16.98■□□□□ 0.31
RPAIN-211ENST00000572174 VEGFBP49765 207 aa16.98■□□□□ 0.31
RPAIN-211ENST00000572174 NOGQ13253 232 aa16.98■□□□□ 0.31
RPAIN-211ENST00000572174 NAA16Q6N069 864 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-211ENST00000572174 RGMBQ6NW40 437 aa16.98■□□□□ 0.31
RPAIN-211ENST00000572174 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
RPAIN-211ENST00000572174 RWDD1Q9H446 243 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-211ENST00000572174 GPR75-ASB3A0A0A6YYF3 556 aa16.97■□□□□ 0.31
RPAIN-211ENST00000572174 MAP2K2P36507 400 aa16.97■□□□□ 0.31
RPAIN-211ENST00000572174 ZAP70P43403 619 aa16.97■□□□□ 0.31
RPAIN-211ENST00000572174 MAP2K1Q02750 393 aaPredicted RBP16.97■□□□□ 0.31
RPAIN-211ENST00000572174 DCAF15Q66K64 600 aa16.97■□□□□ 0.31
RPAIN-211ENST00000572174 CDC42EP5Q6NZY7 148 aa16.97■□□□□ 0.31
RPAIN-211ENST00000572174 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
RPAIN-211ENST00000572174 SNRKQ9NRH2 765 aa16.97■□□□□ 0.31
RPAIN-211ENST00000572174 USP40Q9NVE5 1235 aa16.97■□□□□ 0.31
RPAIN-211ENST00000572174 MYH1P12882 1939 aa16.96■□□□□ 0.31
RPAIN-211ENST00000572174 ENTPD3O75355 529 aa16.96■□□□□ 0.31
RPAIN-211ENST00000572174 IDH1O75874 414 aaKnown RBP16.96■□□□□ 0.31
RPAIN-211ENST00000572174 CYP2E1P05181 493 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-211ENST00000572174 ATP5JP18859 108 aa16.96■□□□□ 0.31
RPAIN-211ENST00000572174 BTDP43251 543 aa16.96■□□□□ 0.31
RPAIN-211ENST00000572174 ZNF157P51786 506 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-211ENST00000572174 MAP3K11Q16584 847 aa16.96■□□□□ 0.31
RPAIN-211ENST00000572174 TBC1D9Q6ZT07 1266 aa16.96■□□□□ 0.31
RPAIN-211ENST00000572174 BEGAINQ9BUH8 593 aa16.96■□□□□ 0.31
RPAIN-211ENST00000572174 IDI2Q9BXS1 227 aa16.96■□□□□ 0.31
RPAIN-211ENST00000572174 COL2A1P02458 1487 aaPredicted RBP16.95■□□□□ 0.3
RPAIN-211ENST00000572174 ERC2O15083 957 aa16.95■□□□□ 0.3
RPAIN-211ENST00000572174 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
RPAIN-211ENST00000572174 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
RPAIN-211ENST00000572174 AIDAQ96BJ3 306 aa16.95■□□□□ 0.3
RPAIN-211ENST00000572174 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.95■□□□□ 0.3
RPAIN-211ENST00000572174 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
RPAIN-211ENST00000572174 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
RPAIN-211ENST00000572174 ANGEL1Q9UNK9 670 aaKnown RBP16.95■□□□□ 0.3
RPAIN-211ENST00000572174 SCAF8Q9UPN6 1271 aaKnown RBP16.95■□□□□ 0.3
RPAIN-211ENST00000572174 GRM1Q13255 1194 aa16.94■□□□□ 0.3
RPAIN-211ENST00000572174 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
RPAIN-211ENST00000572174 CYP4F22Q6NT55 531 aa16.94■□□□□ 0.3
RPAIN-211ENST00000572174 DLK2Q6UY11 383 aa16.94■□□□□ 0.3
RPAIN-211ENST00000572174 DNAJC2Q99543 621 aaKnown RBP16.94■□□□□ 0.3
RPAIN-211ENST00000572174 TMEM39BQ9GZU3 492 aa16.94■□□□□ 0.3
RPAIN-211ENST00000572174 AOX1Q06278 1338 aa16.94■□□□□ 0.3
RPAIN-211ENST00000572174 TTC41PQ6P2S7 1318 aa16.94■□□□□ 0.3
RPAIN-211ENST00000572174 SSC5DA1L4H1 1573 aa16.94■□□□□ 0.3
RPAIN-211ENST00000572174 RFX7Q2KHR2 1363 aa16.93■□□□□ 0.3
RPAIN-211ENST00000572174 NAV1Q8NEY1 1877 aa16.93■□□□□ 0.3
RPAIN-211ENST00000572174 SLC10A3P09131 477 aa16.93■□□□□ 0.3
RPAIN-211ENST00000572174 LRRFIP1Q32MZ4 808 aaKnown RBP16.93■□□□□ 0.3
RPAIN-211ENST00000572174 NBPF12Q5TAG4 269 aaPredicted RBP16.93■□□□□ 0.3
RPAIN-211ENST00000572174 ANKRD13AQ8IZ07 590 aa16.93■□□□□ 0.3
RPAIN-211ENST00000572174 TEPSINQ96N21 525 aa16.93■□□□□ 0.3
RPAIN-211ENST00000572174 HAUS7Q99871 368 aa16.93■□□□□ 0.3
RPAIN-211ENST00000572174 PAG1Q9NWQ8 432 aa16.93■□□□□ 0.3
RPAIN-211ENST00000572174 CA12O43570 354 aa16.92■□□□□ 0.3
RPAIN-211ENST00000572174 CACNB3P54284 484 aa16.92■□□□□ 0.3
RPAIN-211ENST00000572174 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
RPAIN-211ENST00000572174 EXOC6Q8TAG9 804 aa16.92■□□□□ 0.3
RPAIN-211ENST00000572174 PIH1D3Q9NQM4 214 aaKnown RBP16.92■□□□□ 0.3
RPAIN-211ENST00000572174 CSADQ9Y600 493 aa16.92■□□□□ 0.3
RPAIN-211ENST00000572174 MYH8P13535 1937 aa16.92■□□□□ 0.3
RPAIN-211ENST00000572174 DOCK1Q14185 1865 aa16.91■□□□□ 0.3
RPAIN-211ENST00000572174 SMARCA5O60264 1052 aaPredicted RBP16.91■□□□□ 0.3
RPAIN-211ENST00000572174 CYP7A1P22680 504 aa16.91■□□□□ 0.3
RPAIN-211ENST00000572174 RGS3P49796 1198 aa16.91■□□□□ 0.3
RPAIN-211ENST00000572174 PPP4CP60510 307 aa16.91■□□□□ 0.3
RPAIN-211ENST00000572174 LDLRAD1Q5T700 205 aa16.91■□□□□ 0.3
RPAIN-211ENST00000572174 ZSCAN29Q8IWY8 852 aaPredicted RBP16.91■□□□□ 0.3
RPAIN-211ENST00000572174 MAGEB6Q8N7X4 407 aa16.91■□□□□ 0.3
RPAIN-211ENST00000572174 ATAD5Q96QE3 1844 aa16.91■□□□□ 0.3
RPAIN-211ENST00000572174 ATRNL1Q5VV63 1379 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 UBE2Q2LH0YL09 131 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 GOLIM4O00461 696 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 RHBDL3P58872 404 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 TCP10Q12799 353 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 PRKG1Q13976 671 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 RASAL3Q86YV0 1011 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 TEX11Q8IYF3 940 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 SLC10A4Q96EP9 437 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 ZNF341Q9BYN7 854 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 DHX36Q9H2U1 1008 aaKnown RBP16.9■□□□□ 0.3
RPAIN-211ENST00000572174 BOLA2Q9H3K6 86 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 AATFQ9NY61 560 aaKnown RBP eCLIP16.9■□□□□ 0.3
RPAIN-211ENST00000572174 FAM198AQ9UFP1 575 aa16.9■□□□□ 0.3
RPAIN-211ENST00000572174 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms