RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 AACSQ86V21 672 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 ZFPM1Q8IX07 1006 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 CCDC102AQ96A19 550 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 CLMNQ96JQ2 1002 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 BCL11AQ9H165 835 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 USP40Q9NVE5 1235 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 GAKO14976 1311 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 AK9Q5TCS8 1911 aa12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 HSPA8P11142 646 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 MAP2K1Q02750 393 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 TCP10Q12799 353 aa12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 NOGQ13253 232 aa12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 TNFAIP1Q13829 316 aa12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 SUPT20HL1Q3ZLR7 823 aa12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 DZIP1Q86YF9 867 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 ZGPATQ8N5A5 531 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 NSUN4Q96CB9 384 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 CSRNP1Q96S65 589 aa12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 CRBNQ96SW2 442 aa12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 CHMP4BQ9H444 224 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 PIH1D3Q9NQM4 214 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 FAM198AQ9UFP1 575 aa12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
GTF3C1-213ENST00000571886 SMARCA5O60264 1052 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 HMMRO75330 724 aa12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 SLURP2P0DP57 97 aa12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 LBX1P52954 281 aa12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 HSP90AB4PQ58FF6 505 aa12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 SPTY2D1Q68D10 685 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 ERC1Q8IUD2 1116 aa12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 KIF1BPQ96EK5 621 aa12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 ZNF512BQ96KM6 892 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 ANTXR1Q9H6X2 564 aa12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 OTOFQ9HC10 1997 aa12.56□□□□□ -0.4
GTF3C1-213ENST00000571886 PPP1R12BO60237 982 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 GJA5P36382 358 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 BTDP43251 543 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 TNNI2P48788 182 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 RHBDL3P58872 404 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 FKBP1CQ5VVH2 108 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 FAM83AQ86UY5 434 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 AIDAQ96BJ3 306 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 DDX4Q9NQI0 724 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 TMOD2Q9NZR1 351 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 RAI14Q9P0K7 980 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 MROH7-TTC4A0A0A0MT08 1334 aa12.55□□□□□ -0.4
GTF3C1-213ENST00000571886 GPR75-ASB3A0A0A6YYF3 556 aa12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 RAB11FIP3O75154 756 aa12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 WDHD1O75717 1129 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 CTCFP49711 727 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 MIGA2Q7L4E1 593 aa12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 SH3BP5LQ7L8J4 393 aa12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 ADGRA1Q86SQ6 560 aa12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 FAM151AQ8WW52 585 aa12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 SLC10A4Q96EP9 437 aa12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 LRP2BPQ9P2M1 347 aa12.54□□□□□ -0.4
GTF3C1-213ENST00000571886 CASP8AP2Q9UKL3 1982 aa12.53□□□□□ -0.4
GTF3C1-213ENST00000571886 RGS3P49796 1198 aa12.53□□□□□ -0.4
GTF3C1-213ENST00000571886 SPRYD7Q5W111 196 aa12.53□□□□□ -0.4
GTF3C1-213ENST00000571886 CLASRPQ8N2M8 674 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-213ENST00000571886 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
GTF3C1-213ENST00000571886 IDI2Q9BXS1 227 aa12.53□□□□□ -0.4
GTF3C1-213ENST00000571886 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
GTF3C1-213ENST00000571886 RFX7Q2KHR2 1363 aa12.53□□□□□ -0.4
GTF3C1-213ENST00000571886 DDTLA6NHG4 134 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-213ENST00000571886 IREB2P48200 963 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-213ENST00000571886 SLF2Q8IX21 1173 aa12.52□□□□□ -0.41
GTF3C1-213ENST00000571886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.52□□□□□ -0.41
GTF3C1-213ENST00000571886 EDC3Q96F86 508 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-213ENST00000571886 WNK4Q96J92 1243 aa12.52□□□□□ -0.41
GTF3C1-213ENST00000571886 ELP3Q9H9T3 547 aa12.52□□□□□ -0.41
GTF3C1-213ENST00000571886 RNF186Q9NXI6 227 aa12.52□□□□□ -0.41
GTF3C1-213ENST00000571886 CDK5RAP2Q96SN8 1893 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 TRPA1O75762 1119 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 LDHCP07864 332 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 IFIT2P09913 472 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 DYNLL1P63167 89 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 GSTO1P78417 241 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 PICALMQ13492 652 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 NAA16Q6N069 864 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 SH3RF3Q8TEJ3 882 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 BEGAINQ9BUH8 593 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 PRDM10Q9NQV6 1147 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 AATFQ9NY61 560 aaKnown RBP eCLIP12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 DOCK2Q92608 1830 aa12.51□□□□□ -0.41
GTF3C1-213ENST00000571886 ENTPD3O75355 529 aa12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 IDH1O75874 414 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 INPP5BP32019 993 aa12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 TM4SF4P48230 202 aa12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 VGLL4Q14135 290 aa12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 SLFNL1Q499Z3 407 aa12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 OPTNQ96CV9 577 aa12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 BOLA2Q9H3K6 86 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms