RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 MAP3K11Q16584 847 aa17.89■□□□□ 0.45
LITAF-208ENST00000571627 TTC39AQ5SRH9 613 aa17.89■□□□□ 0.45
LITAF-208ENST00000571627 CDC42EP5Q6NZY7 148 aa17.89■□□□□ 0.45
LITAF-208ENST00000571627 TBC1D9Q6ZT07 1266 aa17.89■□□□□ 0.45
LITAF-208ENST00000571627 CSRNP1Q96S65 589 aa17.89■□□□□ 0.45
LITAF-208ENST00000571627 CCDC8Q9H0W5 538 aaPredicted RBP17.89■□□□□ 0.45
LITAF-208ENST00000571627 SNRKQ9NRH2 765 aa17.89■□□□□ 0.45
LITAF-208ENST00000571627 MAST2Q6P0Q8 1798 aa17.89■□□□□ 0.45
LITAF-208ENST00000571627 MECOMQ03112 1051 aa17.88■□□□□ 0.45
LITAF-208ENST00000571627 NFIAQ12857 509 aa17.88■□□□□ 0.45
LITAF-208ENST00000571627 TNS4Q8IZW8 715 aa17.88■□□□□ 0.45
LITAF-208ENST00000571627 EAF2Q96CJ1 260 aaPredicted RBP17.88■□□□□ 0.45
LITAF-208ENST00000571627 DBNLQ9UJU6 430 aaKnown RBP17.88■□□□□ 0.45
LITAF-208ENST00000571627 LAMB1P07942 1786 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 APBB1O00213 710 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 CA12O43570 354 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 UQCRFS1P1P0C7P4 283 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 IREB2P48200 963 aaKnown RBP17.87■□□□□ 0.45
LITAF-208ENST00000571627 FKBP1CQ5VVH2 108 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 SPTY2D1Q68D10 685 aaPredicted RBP17.87■□□□□ 0.45
LITAF-208ENST00000571627 ERICH6Q7L0X2 663 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 FAM83AQ86UY5 434 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
LITAF-208ENST00000571627 ZNF384Q8TF68 577 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 USP40Q9NVE5 1235 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 GAKO14976 1311 aa17.87■□□□□ 0.45
LITAF-208ENST00000571627 DOCK2Q92608 1830 aa17.86■□□□□ 0.45
LITAF-208ENST00000571627 TCP10Q12799 353 aa17.86■□□□□ 0.45
LITAF-208ENST00000571627 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
LITAF-208ENST00000571627 SPRYD7Q5W111 196 aa17.86■□□□□ 0.45
LITAF-208ENST00000571627 ERC1Q8IUD2 1116 aa17.86■□□□□ 0.45
LITAF-208ENST00000571627 SLC10A4Q96EP9 437 aa17.86■□□□□ 0.45
LITAF-208ENST00000571627 IL1RAPL2Q9NP60 686 aa17.86■□□□□ 0.45
LITAF-208ENST00000571627 RNF186Q9NXI6 227 aa17.86■□□□□ 0.45
LITAF-208ENST00000571627 MROH7-TTC4A0A0A0MT08 1334 aa17.85■□□□□ 0.45
LITAF-208ENST00000571627 HMMRO75330 724 aa17.85■□□□□ 0.45
LITAF-208ENST00000571627 TRPA1O75762 1119 aa17.85■□□□□ 0.45
LITAF-208ENST00000571627 BTDP43251 543 aa17.85■□□□□ 0.45
LITAF-208ENST00000571627 IFFO2Q5TF58 517 aa17.85■□□□□ 0.45
LITAF-208ENST00000571627 AACSQ86V21 672 aa17.85■□□□□ 0.45
LITAF-208ENST00000571627 RPAP1Q9BWH6 1393 aaPredicted RBP17.85■□□□□ 0.45
LITAF-208ENST00000571627 BCL11AQ9H165 835 aa17.85■□□□□ 0.45
LITAF-208ENST00000571627 RAI14Q9P0K7 980 aa17.85■□□□□ 0.45
LITAF-208ENST00000571627 FAM198AQ9UFP1 575 aa17.85■□□□□ 0.45
LITAF-208ENST00000571627 RRP1P56182 461 aaKnown RBP17.84■□□□□ 0.45
LITAF-208ENST00000571627 ANKRD13AQ8IZ07 590 aa17.84■□□□□ 0.45
LITAF-208ENST00000571627 RHPN1Q8TCX5 695 aa17.84■□□□□ 0.45
LITAF-208ENST00000571627 FAM151AQ8WW52 585 aa17.84■□□□□ 0.45
LITAF-208ENST00000571627 NSUN4Q96CB9 384 aaKnown RBP17.84■□□□□ 0.45
LITAF-208ENST00000571627 WNK4Q96J92 1243 aa17.84■□□□□ 0.45
LITAF-208ENST00000571627 ELP3Q9H9T3 547 aa17.84■□□□□ 0.45
LITAF-208ENST00000571627 LRP2BPQ9P2M1 347 aa17.84■□□□□ 0.45
LITAF-208ENST00000571627 RFX7Q2KHR2 1363 aa17.83■□□□□ 0.45
LITAF-208ENST00000571627 GJA5P36382 358 aa17.83■□□□□ 0.44
LITAF-208ENST00000571627 ZAP70P43403 619 aa17.83■□□□□ 0.44
LITAF-208ENST00000571627 HSP90AB4PQ58FF6 505 aa17.83■□□□□ 0.44
LITAF-208ENST00000571627 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.83■□□□□ 0.44
LITAF-208ENST00000571627 ZFPM1Q8IX07 1006 aa17.83■□□□□ 0.44
LITAF-208ENST00000571627 SLF2Q8IX21 1173 aa17.83■□□□□ 0.44
LITAF-208ENST00000571627 FAM163AQ96GL9 167 aaPredicted RBP17.83■□□□□ 0.44
LITAF-208ENST00000571627 SAGE1Q9NXZ1 904 aa17.83■□□□□ 0.44
LITAF-208ENST00000571627 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.44
LITAF-208ENST00000571627 CDK5RAP2Q96SN8 1893 aa17.82■□□□□ 0.44
LITAF-208ENST00000571627 CYP2E1P05181 493 aaPredicted RBP17.82■□□□□ 0.44
LITAF-208ENST00000571627 RGS3P49796 1198 aa17.82■□□□□ 0.44
LITAF-208ENST00000571627 VGLL4Q14135 290 aa17.82■□□□□ 0.44
LITAF-208ENST00000571627 MIGA2Q7L4E1 593 aa17.82■□□□□ 0.44
LITAF-208ENST00000571627 REM2Q8IYK8 340 aaPredicted RBP17.82■□□□□ 0.44
LITAF-208ENST00000571627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
LITAF-208ENST00000571627 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
LITAF-208ENST00000571627 ZNF512BQ96KM6 892 aaPredicted RBP17.82■□□□□ 0.44
LITAF-208ENST00000571627 GPR75-ASB3A0A0A6YYF3 556 aa17.81■□□□□ 0.44
LITAF-208ENST00000571627 UNCXA6NJT0 531 aa17.81■□□□□ 0.44
LITAF-208ENST00000571627 GSTO1P78417 241 aa17.81■□□□□ 0.44
LITAF-208ENST00000571627 PICALMQ13492 652 aa17.81■□□□□ 0.44
LITAF-208ENST00000571627 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
LITAF-208ENST00000571627 WRNIP1Q96S55 665 aa17.81■□□□□ 0.44
LITAF-208ENST00000571627 DDX4Q9NQI0 724 aaKnown RBP17.81■□□□□ 0.44
LITAF-208ENST00000571627 PIH1D3Q9NQM4 214 aaKnown RBP17.81■□□□□ 0.44
LITAF-208ENST00000571627 WDHD1O75717 1129 aaPredicted RBP17.8■□□□□ 0.44
LITAF-208ENST00000571627 ZBTB48P10074 688 aaPredicted RBP17.8■□□□□ 0.44
LITAF-208ENST00000571627 TM4SF4P48230 202 aa17.8■□□□□ 0.44
LITAF-208ENST00000571627 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
LITAF-208ENST00000571627 SREBF2Q12772 1141 aa17.8■□□□□ 0.44
LITAF-208ENST00000571627 OPTNQ96CV9 577 aa17.8■□□□□ 0.44
LITAF-208ENST00000571627 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
LITAF-208ENST00000571627 LDHCP07864 332 aa17.79■□□□□ 0.44
LITAF-208ENST00000571627 RHBDL3P58872 404 aa17.79■□□□□ 0.44
LITAF-208ENST00000571627 DCAF15Q66K64 600 aa17.79■□□□□ 0.44
LITAF-208ENST00000571627 NAA16Q6N069 864 aaPredicted RBP17.79■□□□□ 0.44
LITAF-208ENST00000571627 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
LITAF-208ENST00000571627 HOOK2Q96ED9 719 aa17.79■□□□□ 0.44
LITAF-208ENST00000571627 CSADQ9Y600 493 aa17.79■□□□□ 0.44
LITAF-208ENST00000571627 SNCAIPQ9Y6H5 919 aa17.79■□□□□ 0.44
LITAF-208ENST00000571627 FOCADQ5VW36 1801 aa17.79■□□□□ 0.44
LITAF-208ENST00000571627 MANSC4A6NHS7 340 aaPredicted RBP17.78■□□□□ 0.44
LITAF-208ENST00000571627 RAB11FIP3O75154 756 aa17.78■□□□□ 0.44
LITAF-208ENST00000571627 ENTPD3O75355 529 aa17.78■□□□□ 0.44
LITAF-208ENST00000571627 CAPN15O75808 1086 aa17.78■□□□□ 0.44
LITAF-208ENST00000571627 TBC1D8O95759 1140 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms