RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 FAM151AQ8WW52 585 aa21.9■■□□□ 1.1
CIITA-206ENST00000571190 ARMC5Q96C12 935 aa21.9■■□□□ 1.1
CIITA-206ENST00000571190 MEIS3Q99687 375 aa21.9■■□□□ 1.1
CIITA-206ENST00000571190 OTOFQ9HC10 1997 aa21.89■■□□□ 1.09
CIITA-206ENST00000571190 BTBD19C9JJ37 291 aa21.89■■□□□ 1.09
CIITA-206ENST00000571190 INPP5BP32019 993 aa21.89■■□□□ 1.09
CIITA-206ENST00000571190 API5Q9BZZ5 524 aaKnown RBP21.89■■□□□ 1.09
CIITA-206ENST00000571190 FAM198AQ9UFP1 575 aa21.89■■□□□ 1.09
CIITA-206ENST00000571190 HTTP42858 3142 aa21.89■■□□□ 1.09
CIITA-206ENST00000571190 CETPP11597 493 aa21.88■■□□□ 1.09
CIITA-206ENST00000571190 ADORA1P30542 326 aa21.88■■□□□ 1.09
CIITA-206ENST00000571190 IL15P40933 162 aaPredicted RBP21.88■■□□□ 1.09
CIITA-206ENST00000571190 RARSP54136 660 aaKnown RBP21.88■■□□□ 1.09
CIITA-206ENST00000571190 PPIL2Q13356 520 aa21.88■■□□□ 1.09
CIITA-206ENST00000571190 HOOK2Q96ED9 719 aa21.88■■□□□ 1.09
CIITA-206ENST00000571190 ZNF341Q9BYN7 854 aa21.88■■□□□ 1.09
CIITA-206ENST00000571190 COPRSQ9NQ92 184 aa21.88■■□□□ 1.09
CIITA-206ENST00000571190 ZNF112Q9UJU3 913 aa21.88■■□□□ 1.09
CIITA-206ENST00000571190 SALL1Q9NSC2 1324 aa21.87■■□□□ 1.09
CIITA-206ENST00000571190 ZBTB22O15209 634 aa21.87■■□□□ 1.09
CIITA-206ENST00000571190 TCP10Q12799 353 aa21.87■■□□□ 1.09
CIITA-206ENST00000571190 DCAF15Q66K64 600 aa21.87■■□□□ 1.09
CIITA-206ENST00000571190 ZFPM1Q8IX07 1006 aa21.87■■□□□ 1.09
CIITA-206ENST00000571190 TLR2O60603 784 aa21.86■■□□□ 1.09
CIITA-206ENST00000571190 LDHBP07195 334 aaKnown RBP21.86■■□□□ 1.09
CIITA-206ENST00000571190 SNAPC2Q13487 334 aa21.86■■□□□ 1.09
CIITA-206ENST00000571190 ZCCHC17Q9NP64 241 aaKnown RBP21.86■■□□□ 1.09
CIITA-206ENST00000571190 DENND2AQ9ULE3 1009 aa21.86■■□□□ 1.09
CIITA-206ENST00000571190 PTCH2Q9Y6C5 1203 aa21.86■■□□□ 1.09
CIITA-206ENST00000571190 SEMA3EO15041 775 aa21.85■■□□□ 1.09
CIITA-206ENST00000571190 PPATQ06203 517 aa21.85■■□□□ 1.09
CIITA-206ENST00000571190 CCDC102BQ68D86 513 aa21.85■■□□□ 1.09
CIITA-206ENST00000571190 ARHGAP39Q9C0H5 1083 aa21.85■■□□□ 1.09
CIITA-206ENST00000571190 USP40Q9NVE5 1235 aa21.85■■□□□ 1.09
CIITA-206ENST00000571190 GNL3LQ9NVN8 582 aaKnown RBP21.85■■□□□ 1.09
CIITA-206ENST00000571190 TIMM10P62072 90 aa21.84■■□□□ 1.09
CIITA-206ENST00000571190 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.84■■□□□ 1.09
CIITA-206ENST00000571190 ZNF333Q96JL9 665 aa21.84■■□□□ 1.09
CIITA-206ENST00000571190 KCNH4Q9UQ05 1017 aa21.84■■□□□ 1.09
CIITA-206ENST00000571190 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.84■■□□□ 1.09
CIITA-206ENST00000571190 EN2P19622 333 aaPredicted RBP21.83■■□□□ 1.09
CIITA-206ENST00000571190 MOGSQ13724 837 aa21.83■■□□□ 1.09
CIITA-206ENST00000571190 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.09
CIITA-206ENST00000571190 HDAC5Q9UQL6 1122 aa21.83■■□□□ 1.09
CIITA-206ENST00000571190 LACTBP83111 547 aaPredicted RBP21.82■■□□□ 1.08
CIITA-206ENST00000571190 RASGRF1Q13972 1273 aa21.82■■□□□ 1.08
CIITA-206ENST00000571190 NOL9Q5SY16 702 aaKnown RBP21.82■■□□□ 1.08
CIITA-206ENST00000571190 C17orf99Q6UX52 265 aa21.82■■□□□ 1.08
CIITA-206ENST00000571190 ATRNL1Q5VV63 1379 aa21.82■■□□□ 1.08
CIITA-206ENST00000571190 GAKO14976 1311 aa21.81■■□□□ 1.08
CIITA-206ENST00000571190 CCER2I3L3R5 266 aa21.81■■□□□ 1.08
CIITA-206ENST00000571190 MTX1Q13505 466 aa21.81■■□□□ 1.08
CIITA-206ENST00000571190 SH3BP5LQ7L8J4 393 aa21.81■■□□□ 1.08
CIITA-206ENST00000571190 IDI2Q9BXS1 227 aa21.81■■□□□ 1.08
CIITA-206ENST00000571190 TNNQ9UQP3 1299 aa21.81■■□□□ 1.08
CIITA-206ENST00000571190 PHF20L1A8MW92 1017 aa21.8■■□□□ 1.08
CIITA-206ENST00000571190 CTGFP29279 349 aa21.8■■□□□ 1.08
CIITA-206ENST00000571190 TFCP2Q12800 502 aa21.8■■□□□ 1.08
CIITA-206ENST00000571190 ARHGEF6Q15052 776 aa21.8■■□□□ 1.08
CIITA-206ENST00000571190 ANKRD23Q86SG2 305 aa21.8■■□□□ 1.08
CIITA-206ENST00000571190 PDE4DIPQ5VU43 2346 aa21.8■■□□□ 1.08
CIITA-206ENST00000571190 ADGRA2Q96PE1 1338 aa21.8■■□□□ 1.08
CIITA-206ENST00000571190 RFX7Q2KHR2 1363 aa21.79■■□□□ 1.08
CIITA-206ENST00000571190 A0A1B0GUL7 405 aa21.79■■□□□ 1.08
CIITA-206ENST00000571190 SRGAP3O43295 1099 aa21.79■■□□□ 1.08
CIITA-206ENST00000571190 GNAI3P08754 354 aa21.79■■□□□ 1.08
CIITA-206ENST00000571190 SLURP2P0DP57 97 aa21.79■■□□□ 1.08
CIITA-206ENST00000571190 RGS3P49796 1198 aa21.79■■□□□ 1.08
CIITA-206ENST00000571190 FAM163AQ96GL9 167 aaPredicted RBP21.79■■□□□ 1.08
CIITA-206ENST00000571190 XAGE2Q96GT9 111 aa21.79■■□□□ 1.08
CIITA-206ENST00000571190 CPA4Q9UI42 421 aa21.79■■□□□ 1.08
CIITA-206ENST00000571190 PDS5AQ29RF7 1337 aaKnown RBP21.79■■□□□ 1.08
CIITA-206ENST00000571190 PDHXO00330 501 aa21.78■■□□□ 1.08
CIITA-206ENST00000571190 ENTPD3O75355 529 aa21.78■■□□□ 1.08
CIITA-206ENST00000571190 WDHD1O75717 1129 aaPredicted RBP21.78■■□□□ 1.08
CIITA-206ENST00000571190 MAP3K10Q02779 954 aa21.78■■□□□ 1.08
CIITA-206ENST00000571190 SLC9C1Q4G0N8 1177 aa21.78■■□□□ 1.08
CIITA-206ENST00000571190 ZNF384Q8TF68 577 aa21.78■■□□□ 1.08
CIITA-206ENST00000571190 DDX4Q9NQI0 724 aaKnown RBP21.78■■□□□ 1.08
CIITA-206ENST00000571190 GPAT2Q6NUI2 795 aa21.77■■□□□ 1.08
CIITA-206ENST00000571190 ZGPATQ8N5A5 531 aaKnown RBP21.77■■□□□ 1.08
CIITA-206ENST00000571190 ABCF2Q9UG63 623 aa21.77■■□□□ 1.08
CIITA-206ENST00000571190 DDTLA6NHG4 134 aaPredicted RBP21.76■■□□□ 1.07
CIITA-206ENST00000571190 TRIM27P14373 513 aa21.76■■□□□ 1.07
CIITA-206ENST00000571190 KIF22Q14807 665 aa21.76■■□□□ 1.07
CIITA-206ENST00000571190 NBPF11Q86T75 865 aa21.76■■□□□ 1.07
CIITA-206ENST00000571190 SH3TC2Q8TF17 1288 aa21.76■■□□□ 1.07
CIITA-206ENST00000571190 TMEM106CQ9BVX2 250 aa21.76■■□□□ 1.07
CIITA-206ENST00000571190 CXCL11O14625 94 aa21.75■■□□□ 1.07
CIITA-206ENST00000571190 BCAR3O75815 825 aa21.75■■□□□ 1.07
CIITA-206ENST00000571190 ECM2O94769 699 aaPredicted RBP21.75■■□□□ 1.07
CIITA-206ENST00000571190 RHBDL3P58872 404 aa21.75■■□□□ 1.07
CIITA-206ENST00000571190 DZIP1Q86YF9 867 aaKnown RBP21.75■■□□□ 1.07
CIITA-206ENST00000571190 TRIM47Q96LD4 638 aa21.75■■□□□ 1.07
CIITA-206ENST00000571190 AKAP2Q9Y2D5 859 aa21.75■■□□□ 1.07
CIITA-206ENST00000571190 GNRH1P01148 92 aa21.74■■□□□ 1.07
CIITA-206ENST00000571190 BTDP43251 543 aa21.74■■□□□ 1.07
CIITA-206ENST00000571190 MECOMQ03112 1051 aa21.74■■□□□ 1.07
CIITA-206ENST00000571190 MVPQ14764 893 aaKnown RBP21.74■■□□□ 1.07
CIITA-206ENST00000571190 PI16Q6UXB8 463 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms