RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 PI16Q6UXB8 463 aa15.56■□□□□ 0.08
TVP23B-204ENST00000571018 ARMC9Q7Z3E5 817 aa15.56■□□□□ 0.08
TVP23B-204ENST00000571018 RHPN1Q8TCX5 695 aa15.56■□□□□ 0.08
TVP23B-204ENST00000571018 DBNLQ9UJU6 430 aaKnown RBP15.56■□□□□ 0.08
TVP23B-204ENST00000571018 MAP3K11Q16584 847 aa15.55■□□□□ 0.08
TVP23B-204ENST00000571018 KIF1BPQ96EK5 621 aa15.55■□□□□ 0.08
TVP23B-204ENST00000571018 FAM163AQ96GL9 167 aaPredicted RBP15.55■□□□□ 0.08
TVP23B-204ENST00000571018 TEPSINQ96N21 525 aa15.55■□□□□ 0.08
TVP23B-204ENST00000571018 CCDC8Q9H0W5 538 aaPredicted RBP15.55■□□□□ 0.08
TVP23B-204ENST00000571018 TMOD2Q9NZR1 351 aa15.55■□□□□ 0.08
TVP23B-204ENST00000571018 SSC5DA1L4H1 1573 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 GAKO14976 1311 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 PPP1R12BO60237 982 aaPredicted RBP15.54■□□□□ 0.08
TVP23B-204ENST00000571018 RAB11FIP3O75154 756 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 SLC10A3P09131 477 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 CACNB3P54284 484 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 PRKG1Q13976 671 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 LDLRAD1Q5T700 205 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 ERICH6Q7L0X2 663 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 FAM83AQ86UY5 434 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 DZIP1Q86YF9 867 aaKnown RBP15.54■□□□□ 0.08
TVP23B-204ENST00000571018 SLF2Q8IX21 1173 aa15.54■□□□□ 0.08
TVP23B-204ENST00000571018 TLR7Q9NYK1 1049 aaKnown RBP15.54■□□□□ 0.08
TVP23B-204ENST00000571018 ANGEL1Q9UNK9 670 aaKnown RBP15.54■□□□□ 0.08
TVP23B-204ENST00000571018 FOXN1O15353 648 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 MECOMQ03112 1051 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 CDC42EP5Q6NZY7 148 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 TBC1D9Q6ZT07 1266 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 AACSQ86V21 672 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 RASAL3Q86YV0 1011 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 AIDAQ96BJ3 306 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 ZIC5Q96T25 663 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 TMEM39BQ9GZU3 492 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 IL1RAPL2Q9NP60 686 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 FZD1Q9UP38 647 aa15.53■□□□□ 0.08
TVP23B-204ENST00000571018 UNCXA6NJT0 531 aa15.52■□□□□ 0.08
TVP23B-204ENST00000571018 USP2O75604 605 aaPredicted RBP15.52■□□□□ 0.08
TVP23B-204ENST00000571018 KIF23Q02241 960 aaPredicted RBP15.52■□□□□ 0.08
TVP23B-204ENST00000571018 CDAN1Q8IWY9 1227 aa15.52■□□□□ 0.08
TVP23B-204ENST00000571018 CLASRPQ8N2M8 674 aaKnown RBP15.52■□□□□ 0.08
TVP23B-204ENST00000571018 ZNF384Q8TF68 577 aa15.52■□□□□ 0.08
TVP23B-204ENST00000571018 SNRKQ9NRH2 765 aa15.52■□□□□ 0.08
TVP23B-204ENST00000571018 USP40Q9NVE5 1235 aa15.52■□□□□ 0.08
TVP23B-204ENST00000571018 APBB1O00213 710 aa15.51■□□□□ 0.07
TVP23B-204ENST00000571018 CYP2E1P05181 493 aaPredicted RBP15.51■□□□□ 0.07
TVP23B-204ENST00000571018 FAM151AQ8WW52 585 aa15.51■□□□□ 0.07
TVP23B-204ENST00000571018 NSUN4Q96CB9 384 aaKnown RBP15.51■□□□□ 0.07
TVP23B-204ENST00000571018 BEGAINQ9BUH8 593 aa15.51■□□□□ 0.07
TVP23B-204ENST00000571018 RAI14Q9P0K7 980 aa15.51■□□□□ 0.07
TVP23B-204ENST00000571018 LRP2BPQ9P2M1 347 aa15.51■□□□□ 0.07
TVP23B-204ENST00000571018 MROH7-TTC4A0A0A0MT08 1334 aa15.5■□□□□ 0.07
TVP23B-204ENST00000571018 GPR75-ASB3A0A0A6YYF3 556 aa15.5■□□□□ 0.07
TVP23B-204ENST00000571018 IGSF3O75054 1194 aa15.5■□□□□ 0.07
TVP23B-204ENST00000571018 LDHCP07864 332 aa15.5■□□□□ 0.07
TVP23B-204ENST00000571018 ZAP70P43403 619 aa15.5■□□□□ 0.07
TVP23B-204ENST00000571018 IREB2P48200 963 aaKnown RBP15.5■□□□□ 0.07
TVP23B-204ENST00000571018 CTCFP49711 727 aaPredicted RBP15.5■□□□□ 0.07
TVP23B-204ENST00000571018 GSTO1P78417 241 aa15.5■□□□□ 0.07
TVP23B-204ENST00000571018 RPAP1Q9BWH6 1393 aaPredicted RBP15.49■□□□□ 0.07
TVP23B-204ENST00000571018 BTDP43251 543 aa15.49■□□□□ 0.07
TVP23B-204ENST00000571018 NFIAQ12857 509 aa15.49■□□□□ 0.07
TVP23B-204ENST00000571018 HOOK2Q96ED9 719 aa15.49■□□□□ 0.07
TVP23B-204ENST00000571018 IDI2Q9BXS1 227 aa15.49■□□□□ 0.07
TVP23B-204ENST00000571018 FAM198AQ9UFP1 575 aa15.49■□□□□ 0.07
TVP23B-204ENST00000571018 AKAP11Q9UKA4 1901 aa15.49■□□□□ 0.07
TVP23B-204ENST00000571018 CA12O43570 354 aa15.48■□□□□ 0.07
TVP23B-204ENST00000571018 IFIT2P09913 472 aaKnown RBP15.48■□□□□ 0.07
TVP23B-204ENST00000571018 VASPP50552 380 aaPredicted RBP15.48■□□□□ 0.07
TVP23B-204ENST00000571018 TCP10Q12799 353 aa15.48■□□□□ 0.07
TVP23B-204ENST00000571018 ANKRD13AQ8IZ07 590 aa15.48■□□□□ 0.07
TVP23B-204ENST00000571018 SLC10A4Q96EP9 437 aa15.48■□□□□ 0.07
TVP23B-204ENST00000571018 CSRNP1Q96S65 589 aa15.48■□□□□ 0.07
TVP23B-204ENST00000571018 DCTPP1Q9H773 170 aa15.48■□□□□ 0.07
TVP23B-204ENST00000571018 PCDHB15Q9Y5E8 787 aa15.48■□□□□ 0.07
TVP23B-204ENST00000571018 MYH2Q9UKX2 1941 aa15.48■□□□□ 0.07
TVP23B-204ENST00000571018 ENTPD3O75355 529 aa15.47■□□□□ 0.07
TVP23B-204ENST00000571018 MAP4K4O95819 1239 aaPredicted RBP15.47■□□□□ 0.07
TVP23B-204ENST00000571018 HSPA8P11142 646 aaKnown RBP15.47■□□□□ 0.07
TVP23B-204ENST00000571018 RHBDL3P58872 404 aa15.47■□□□□ 0.07
TVP23B-204ENST00000571018 SPRYD7Q5W111 196 aa15.47■□□□□ 0.07
TVP23B-204ENST00000571018 CLMNQ96JQ2 1002 aa15.47■□□□□ 0.07
TVP23B-204ENST00000571018 CRBNQ96SW2 442 aa15.47■□□□□ 0.07
TVP23B-204ENST00000571018 LRRCC1Q9C099 1032 aa15.47■□□□□ 0.07
TVP23B-204ENST00000571018 PIH1D3Q9NQM4 214 aaKnown RBP15.47■□□□□ 0.07
TVP23B-204ENST00000571018 PRDM10Q9NQV6 1147 aa15.47■□□□□ 0.07
TVP23B-204ENST00000571018 RFX7Q2KHR2 1363 aa15.47■□□□□ 0.07
TVP23B-204ENST00000571018 WDHD1O75717 1129 aaPredicted RBP15.46■□□□□ 0.07
TVP23B-204ENST00000571018 PRR29P0C7W0 189 aa15.46■□□□□ 0.07
TVP23B-204ENST00000571018 RGS3P49796 1198 aa15.46■□□□□ 0.07
TVP23B-204ENST00000571018 LBX1P52954 281 aa15.46■□□□□ 0.07
TVP23B-204ENST00000571018 COL13A1Q5TAT6 717 aaPredicted RBP15.46■□□□□ 0.07
TVP23B-204ENST00000571018 NAA16Q6N069 864 aaPredicted RBP15.46■□□□□ 0.07
TVP23B-204ENST00000571018 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.46■□□□□ 0.07
TVP23B-204ENST00000571018 ZFPM1Q8IX07 1006 aa15.46■□□□□ 0.07
TVP23B-204ENST00000571018 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.07
TVP23B-204ENST00000571018 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.46■□□□□ 0.07
TVP23B-204ENST00000571018 ZBTB48P10074 688 aaPredicted RBP15.45■□□□□ 0.06
TVP23B-204ENST00000571018 MAP3K9P80192 1104 aa15.45■□□□□ 0.06
TVP23B-204ENST00000571018 DCAF15Q66K64 600 aa15.45■□□□□ 0.06
TVP23B-204ENST00000571018 WNK4Q96J92 1243 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms