RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 C20orf194Q5TEA3 1177 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.67□□□□□ -1.34
CHD3-212ENST00000570758 TBC1D9Q6ZT07 1266 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 FAM83AQ86UY5 434 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 DZIP1Q86YF9 867 aaKnown RBP6.67□□□□□ -1.34
CHD3-212ENST00000570758 ZFPM1Q8IX07 1006 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 REM2Q8IYK8 340 aaPredicted RBP6.67□□□□□ -1.34
CHD3-212ENST00000570758 ANKRD13AQ8IZ07 590 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHD3-212ENST00000570758 CNKSR2Q8WXI2 1034 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 OPTNQ96CV9 577 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 R3HDMLQ9H3Y0 253 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 ELP3Q9H9T3 547 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 GPR108Q9NPR9 543 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 SNRKQ9NRH2 765 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 USP40Q9NVE5 1235 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 TMOD2Q9NZR1 351 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 FAM198AQ9UFP1 575 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 OTOFQ9HC10 1997 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 CASP8AP2Q9UKL3 1982 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 GAKO14976 1311 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 AKAP11Q9UKA4 1901 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 MANSC4A6NHS7 340 aaPredicted RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 UNCXA6NJT0 531 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 IGF2BP3O00425 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
CHD3-212ENST00000570758 UQCRFS1P1P0C7P4 283 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 ZBTB48P10074 688 aaPredicted RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 MS4A1P11836 297 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 MECOMQ03112 1051 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 SREBF2Q12772 1141 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 VGLL4Q14135 290 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 SPTY2D1Q68D10 685 aaPredicted RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 ERICH6Q7L0X2 663 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 SH3BP5LQ7L8J4 393 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 SIRT2Q8IXJ6 389 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 ZGPATQ8N5A5 531 aaKnown RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 SPATA5Q8NB90 893 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 FAM151AQ8WW52 585 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 EAF2Q96CJ1 260 aaPredicted RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 FAM163AQ96GL9 167 aaPredicted RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 ABHD8Q96I13 439 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 MCOLN1Q9GZU1 580 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 CCDC8Q9H0W5 538 aaPredicted RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 DDX4Q9NQI0 724 aaKnown RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 ZBTB40Q9NUA8 1239 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 TLR7Q9NYK1 1049 aaKnown RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 DBNLQ9UJU6 430 aaKnown RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 EXOC6BQ9Y2D4 811 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 SNCAIPQ9Y6H5 919 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 MROH7-TTC4A0A0A0MT08 1334 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 RFX7Q2KHR2 1363 aa6.66□□□□□ -1.34
CHD3-212ENST00000570758 RPAP1Q9BWH6 1393 aaPredicted RBP6.66□□□□□ -1.34
CHD3-212ENST00000570758 GPR75-ASB3A0A0A6YYF3 556 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 WDHD1O75717 1129 aaPredicted RBP6.65□□□□□ -1.34
CHD3-212ENST00000570758 SLURP2P0DP57 97 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 BTDP43251 543 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 ZAP70P43403 619 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 RGS3P49796 1198 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 RHBDL3P58872 404 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 DGKZQ13574 1117 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 TTC39AQ5SRH9 613 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 MIGA2Q7L4E1 593 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 IFNL1Q8IU54 200 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 ZKSCAN4Q969J2 545 aaPredicted RBP6.65□□□□□ -1.34
CHD3-212ENST00000570758 NSUN4Q96CB9 384 aaKnown RBP6.65□□□□□ -1.34
CHD3-212ENST00000570758 WRNIP1Q96S55 665 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 PTPN18Q99952 460 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 IDI2Q9BXS1 227 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 ZNF341Q9BYN7 854 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 PIH1D3Q9NQM4 214 aaKnown RBP6.65□□□□□ -1.34
CHD3-212ENST00000570758 DDX19BQ9UMR2 479 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 CSADQ9Y600 493 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 MYH2Q9UKX2 1941 aa6.65□□□□□ -1.34
CHD3-212ENST00000570758 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.35
CHD3-212ENST00000570758 TESPA1A2RU30 521 aaPredicted RBP6.64□□□□□ -1.35
CHD3-212ENST00000570758 SPDYE5A6NIY4 337 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 GPR25O00155 361 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 CYP2E1P05181 493 aaPredicted RBP6.64□□□□□ -1.35
CHD3-212ENST00000570758 INPP5BP32019 993 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 INHBEP58166 350 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 PICALMQ13492 652 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 CCDC158Q5M9N0 1113 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 DCAF15Q66K64 600 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 SLF2Q8IX21 1173 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 ZNF296Q8WUU4 475 aaPredicted RBP6.64□□□□□ -1.35
CHD3-212ENST00000570758 BRI3BPQ8WY22 251 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 OTUD5Q96G74 571 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 MS4A4AQ96JQ5 239 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 ZNF512BQ96KM6 892 aaPredicted RBP6.64□□□□□ -1.35
CHD3-212ENST00000570758 CFHR5Q9BXR6 569 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 IL1RAPL2Q9NP60 686 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 RAI14Q9P0K7 980 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 ZNF112Q9UJU3 913 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 LAMB1P07942 1786 aa6.64□□□□□ -1.35
CHD3-212ENST00000570758 CCL15-CCL14A0A0B4J2E2 113 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 DDTLA6NHG4 134 aaPredicted RBP6.63□□□□□ -1.35
CHD3-212ENST00000570758 CCDC85CA6NKD9 419 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 APBB1O00213 710 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 ENTPD3O75355 529 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 LDHCP07864 332 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms