RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 PRKG1Q13976 671 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 CDC42EP5Q6NZY7 148 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 TBC1D9Q6ZT07 1266 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 AACSQ86V21 672 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 RASAL3Q86YV0 1011 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 SLF2Q8IX21 1173 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 AIDAQ96BJ3 306 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 ZIC5Q96T25 663 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
SMG6-206ENST00000570668 MYH2Q9UKX2 1941 aa13.66□□□□□ -0.22
SMG6-206ENST00000570668 UNCXA6NJT0 531 aa13.65□□□□□ -0.22
SMG6-206ENST00000570668 FOXN1O15353 648 aa13.65□□□□□ -0.22
SMG6-206ENST00000570668 IGSF3O75054 1194 aa13.65□□□□□ -0.22
SMG6-206ENST00000570668 MECOMQ03112 1051 aa13.65□□□□□ -0.22
SMG6-206ENST00000570668 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
SMG6-206ENST00000570668 CLASRPQ8N2M8 674 aaKnown RBP13.65□□□□□ -0.22
SMG6-206ENST00000570668 ZNF384Q8TF68 577 aa13.65□□□□□ -0.22
SMG6-206ENST00000570668 NSUN4Q96CB9 384 aaKnown RBP13.65□□□□□ -0.22
SMG6-206ENST00000570668 SNRKQ9NRH2 765 aa13.65□□□□□ -0.22
SMG6-206ENST00000570668 FZD1Q9UP38 647 aa13.65□□□□□ -0.22
SMG6-206ENST00000570668 RPAP1Q9BWH6 1393 aaPredicted RBP13.64□□□□□ -0.23
SMG6-206ENST00000570668 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
SMG6-206ENST00000570668 CTCFP49711 727 aaPredicted RBP13.64□□□□□ -0.23
SMG6-206ENST00000570668 KIF23Q02241 960 aaPredicted RBP13.64□□□□□ -0.23
SMG6-206ENST00000570668 FAM151AQ8WW52 585 aa13.64□□□□□ -0.23
SMG6-206ENST00000570668 BEGAINQ9BUH8 593 aa13.64□□□□□ -0.23
SMG6-206ENST00000570668 USP40Q9NVE5 1235 aa13.64□□□□□ -0.23
SMG6-206ENST00000570668 RAI14Q9P0K7 980 aa13.64□□□□□ -0.23
SMG6-206ENST00000570668 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
SMG6-206ENST00000570668 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
SMG6-206ENST00000570668 GPR75-ASB3A0A0A6YYF3 556 aa13.63□□□□□ -0.23
SMG6-206ENST00000570668 APBB1O00213 710 aa13.63□□□□□ -0.23
SMG6-206ENST00000570668 CYP2E1P05181 493 aaPredicted RBP13.63□□□□□ -0.23
SMG6-206ENST00000570668 LDHCP07864 332 aa13.63□□□□□ -0.23
SMG6-206ENST00000570668 ZAP70P43403 619 aa13.63□□□□□ -0.23
SMG6-206ENST00000570668 IREB2P48200 963 aaKnown RBP13.63□□□□□ -0.23
SMG6-206ENST00000570668 GSTO1P78417 241 aa13.63□□□□□ -0.23
SMG6-206ENST00000570668 NFIAQ12857 509 aa13.63□□□□□ -0.23
SMG6-206ENST00000570668 IDI2Q9BXS1 227 aa13.63□□□□□ -0.23
SMG6-206ENST00000570668 CA12O43570 354 aa13.62□□□□□ -0.23
SMG6-206ENST00000570668 BTDP43251 543 aa13.62□□□□□ -0.23
SMG6-206ENST00000570668 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
SMG6-206ENST00000570668 ANKRD13AQ8IZ07 590 aa13.62□□□□□ -0.23
SMG6-206ENST00000570668 HOOK2Q96ED9 719 aa13.62□□□□□ -0.23
SMG6-206ENST00000570668 SLC10A4Q96EP9 437 aa13.62□□□□□ -0.23
SMG6-206ENST00000570668 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
SMG6-206ENST00000570668 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
SMG6-206ENST00000570668 FAM198AQ9UFP1 575 aa13.62□□□□□ -0.23
SMG6-206ENST00000570668 PCDHB15Q9Y5E8 787 aa13.62□□□□□ -0.23
SMG6-206ENST00000570668 RFX7Q2KHR2 1363 aa13.61□□□□□ -0.23
SMG6-206ENST00000570668 ENTPD3O75355 529 aa13.61□□□□□ -0.23
SMG6-206ENST00000570668 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
SMG6-206ENST00000570668 MAP4K4O95819 1239 aaPredicted RBP13.61□□□□□ -0.23
SMG6-206ENST00000570668 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
SMG6-206ENST00000570668 HSPA8P11142 646 aaKnown RBP13.61□□□□□ -0.23
SMG6-206ENST00000570668 RHBDL3P58872 404 aa13.61□□□□□ -0.23
SMG6-206ENST00000570668 TCP10Q12799 353 aa13.61□□□□□ -0.23
SMG6-206ENST00000570668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMG6-206ENST00000570668 CLMNQ96JQ2 1002 aa13.61□□□□□ -0.23
SMG6-206ENST00000570668 CRBNQ96SW2 442 aa13.61□□□□□ -0.23
SMG6-206ENST00000570668 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
SMG6-206ENST00000570668 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
SMG6-206ENST00000570668 PRDM10Q9NQV6 1147 aa13.61□□□□□ -0.23
SMG6-206ENST00000570668 RGS3P49796 1198 aa13.6□□□□□ -0.23
SMG6-206ENST00000570668 SPRYD7Q5W111 196 aa13.6□□□□□ -0.23
SMG6-206ENST00000570668 NAA16Q6N069 864 aaPredicted RBP13.6□□□□□ -0.23
SMG6-206ENST00000570668 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.6□□□□□ -0.23
SMG6-206ENST00000570668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMG6-206ENST00000570668 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
SMG6-206ENST00000570668 ZBTB48P10074 688 aaPredicted RBP13.59□□□□□ -0.23
SMG6-206ENST00000570668 LBX1P52954 281 aa13.59□□□□□ -0.23
SMG6-206ENST00000570668 PPP4CP60510 307 aa13.59□□□□□ -0.23
SMG6-206ENST00000570668 MAP3K9P80192 1104 aa13.59□□□□□ -0.23
SMG6-206ENST00000570668 COL13A1Q5TAT6 717 aaPredicted RBP13.59□□□□□ -0.23
SMG6-206ENST00000570668 DCAF15Q66K64 600 aa13.59□□□□□ -0.23
SMG6-206ENST00000570668 ZFPM1Q8IX07 1006 aa13.59□□□□□ -0.23
SMG6-206ENST00000570668 MAST2Q6P0Q8 1798 aa13.58□□□□□ -0.23
SMG6-206ENST00000570668 IDH1O75874 414 aaKnown RBP13.58□□□□□ -0.24
SMG6-206ENST00000570668 BAG3O95817 575 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 TM4SF4P48230 202 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
SMG6-206ENST00000570668 TMED8Q6PL24 325 aaPredicted RBP13.58□□□□□ -0.24
SMG6-206ENST00000570668 WNK4Q96J92 1243 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 ANTXR1Q9H6X2 564 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 DDX4Q9NQI0 724 aaKnown RBP13.58□□□□□ -0.24
SMG6-206ENST00000570668 RNF186Q9NXI6 227 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 SAGE1Q9NXZ1 904 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 NDUFB9Q9Y6M9 179 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 AK9Q5TCS8 1911 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 OTOFQ9HC10 1997 aa13.58□□□□□ -0.24
SMG6-206ENST00000570668 SMARCA5O60264 1052 aaPredicted RBP13.57□□□□□ -0.24
SMG6-206ENST00000570668 ATP5JP18859 108 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 INHBEP58166 350 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 SREBF2Q12772 1141 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 AAMPQ13685 434 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 VGLL4Q14135 290 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms