RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 DESP17661 470 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 RHOXF2Q9BQY4 288 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 OSBPL3Q9H4L5 887 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 NEO1Q92859 1461 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 PPP2R3AQ06190 1150 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 EDC3Q96F86 508 aaKnown RBP17.39■□□□□ 0.37
CIITA-204ENST00000570546 IGSF3O75054 1194 aa17.38■□□□□ 0.37
CIITA-204ENST00000570546 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
CIITA-204ENST00000570546 RRP36Q96EU6 259 aaKnown RBP17.38■□□□□ 0.37
CIITA-204ENST00000570546 TMEM2Q9UHN6 1383 aa17.38■□□□□ 0.37
CIITA-204ENST00000570546 LUC7L2Q9Y383 392 aaKnown RBP17.38■□□□□ 0.37
CIITA-204ENST00000570546 NGLY1Q96IV0 654 aa17.38■□□□□ 0.37
CIITA-204ENST00000570546 CCT6AP40227 531 aaKnown RBP17.38■□□□□ 0.37
CIITA-204ENST00000570546 IGSF22Q8N9C0 903 aa17.38■□□□□ 0.37
CIITA-204ENST00000570546 LSG1Q9H089 658 aaKnown RBP17.38■□□□□ 0.37
CIITA-204ENST00000570546 CALRP27797 417 aaKnown RBP17.37■□□□□ 0.37
CIITA-204ENST00000570546 GIMAP7Q8NHV1 300 aa17.37■□□□□ 0.37
CIITA-204ENST00000570546 PLIN2Q99541 437 aa17.37■□□□□ 0.37
CIITA-204ENST00000570546 VPS18Q9P253 973 aa17.37■□□□□ 0.37
CIITA-204ENST00000570546 GIGYF1O75420 1035 aaPredicted RBP17.37■□□□□ 0.37
CIITA-204ENST00000570546 ST5P78524 1137 aa17.37■□□□□ 0.37
CIITA-204ENST00000570546 ZNF804AQ7Z570 1209 aa17.37■□□□□ 0.37
CIITA-204ENST00000570546 EAF2Q96CJ1 260 aaPredicted RBP17.37■□□□□ 0.37
CIITA-204ENST00000570546 ORAI2Q96SN7 254 aa17.37■□□□□ 0.37
CIITA-204ENST00000570546 RSPH14Q9UHP6 348 aa17.37■□□□□ 0.37
CIITA-204ENST00000570546 POLR2DO15514 142 aaKnown RBP17.36■□□□□ 0.37
CIITA-204ENST00000570546 U2AF2P26368 475 aaKnown RBP eCLIP17.36■□□□□ 0.37
CIITA-204ENST00000570546 OPA1O60313 960 aa17.36■□□□□ 0.37
CIITA-204ENST00000570546 ZNF853P0CG23 659 aa17.36■□□□□ 0.37
CIITA-204ENST00000570546 SMC1AQ14683 1233 aaKnown RBP17.36■□□□□ 0.37
CIITA-204ENST00000570546 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
CIITA-204ENST00000570546 ZNF496Q96IT1 587 aaPredicted RBP17.36■□□□□ 0.37
CIITA-204ENST00000570546 A1BGP04217 495 aa17.36■□□□□ 0.37
CIITA-204ENST00000570546 CCDC172P0C7W6 258 aa17.36■□□□□ 0.37
CIITA-204ENST00000570546 CAPN2P17655 700 aa17.36■□□□□ 0.37
CIITA-204ENST00000570546 KRT40Q6A162 431 aa17.36■□□□□ 0.37
CIITA-204ENST00000570546 KRT79Q5XKE5 535 aa17.36■□□□□ 0.37
CIITA-204ENST00000570546 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
CIITA-204ENST00000570546 MACROD2A1Z1Q3 448 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 NR1I2O75469 434 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 PPP4R3AQ6IN85 833 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 TBC1D5Q92609 795 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 SELENOOQ9BVL4 669 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 IQGAP3Q86VI3 1631 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 ELF2Q15723 593 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 PHKBQ93100 1093 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 ZAP70P43403 619 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 PICALMQ13492 652 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 UNC5CLQ8IV45 518 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 MLKLQ8NB16 471 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 ZFYVE16Q7Z3T8 1539 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 SIRT2Q8IXJ6 389 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 NEK11Q8NG66 645 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 MYL10Q9BUA6 226 aa17.35■□□□□ 0.37
CIITA-204ENST00000570546 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
CIITA-204ENST00000570546 DDB1Q16531 1140 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 SYNRGQ9UMZ2 1314 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 PDE8AO60658 829 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 IBSPP21815 317 aaPredicted RBP17.34■□□□□ 0.37
CIITA-204ENST00000570546 CTDSPL2Q05D32 466 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 HDXQ7Z353 690 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 DENND2AQ9ULE3 1009 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 GOLGA6L10A0A0M3HER8 536 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 GNA11P29992 359 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 ARID5AQ03989 594 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 TUBBP07437 444 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 EZRP15311 586 aaKnown RBP17.34■□□□□ 0.37
CIITA-204ENST00000570546 KIAA0753Q2KHM9 967 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 CCDC122Q5T0U0 273 aa17.34■□□□□ 0.37
CIITA-204ENST00000570546 TRIM14Q14142 442 aa17.33■□□□□ 0.37
CIITA-204ENST00000570546 CCDC91Q7Z6B0 441 aa17.33■□□□□ 0.37
CIITA-204ENST00000570546 PFKFB2O60825 505 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 TRMT1LQ7Z2T5 733 aaKnown RBP17.33■□□□□ 0.36
CIITA-204ENST00000570546 ZBTB9Q96C00 473 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 ZNF274Q96GC6 653 aaPredicted RBP17.33■□□□□ 0.36
CIITA-204ENST00000570546 ANKRD2Q9GZV1 360 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 VPS16Q9H269 839 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 SAMM50Q9Y512 469 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 TNNI2P48788 182 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 PIK3AP1Q6ZUJ8 805 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 V9GY48 417 aaPredicted RBP17.33■□□□□ 0.36
CIITA-204ENST00000570546 F8W031 263 aaPredicted RBP17.33■□□□□ 0.36
CIITA-204ENST00000570546 ADALQ6DHV7 355 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 CARD6Q9BX69 1037 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 TSGA10Q9BZW7 698 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 ADCY10Q96PN6 1610 aa17.33■□□□□ 0.36
CIITA-204ENST00000570546 RASEFQ8IZ41 740 aa17.32■□□□□ 0.36
CIITA-204ENST00000570546 PODXL2Q9NZ53 605 aa17.32■□□□□ 0.36
CIITA-204ENST00000570546 POSTNQ15063 836 aa17.32■□□□□ 0.36
CIITA-204ENST00000570546 NBPF11Q86T75 865 aa17.32■□□□□ 0.36
CIITA-204ENST00000570546 SEC62Q99442 399 aaKnown RBP17.32■□□□□ 0.36
CIITA-204ENST00000570546 TTF2Q9UNY4 1162 aaKnown RBP17.32■□□□□ 0.36
CIITA-204ENST00000570546 YEATS2Q9ULM3 1422 aa17.32■□□□□ 0.36
CIITA-204ENST00000570546 LDHBP07195 334 aaKnown RBP17.32■□□□□ 0.36
CIITA-204ENST00000570546 CYP26C1Q6V0L0 522 aa17.32■□□□□ 0.36
CIITA-204ENST00000570546 NAPGQ99747 312 aaPredicted RBP17.32■□□□□ 0.36
CIITA-204ENST00000570546 ZNF532Q9HCE3 1301 aa17.32■□□□□ 0.36
CIITA-204ENST00000570546 PHACTR2O75167 634 aa17.32■□□□□ 0.36
CIITA-204ENST00000570546 XPO4Q9C0E2 1151 aaKnown RBP17.32■□□□□ 0.36
CIITA-204ENST00000570546 METP08581 1390 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms