RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 LIN7BQ9HAP6 207 aa6.53□□□□□ -1.36
CFDP1-208ENST00000569341 LGR6Q9HBX8 967 aa6.53□□□□□ -1.36
CFDP1-208ENST00000569341 RAD18Q9NS91 495 aa6.53□□□□□ -1.36
CFDP1-208ENST00000569341 PPP1R9AQ9ULJ8 1098 aa6.53□□□□□ -1.36
CFDP1-208ENST00000569341 AOC2O75106 756 aa6.52□□□□□ -1.37
CFDP1-208ENST00000569341 B3GALT4O96024 378 aa6.52□□□□□ -1.37
CFDP1-208ENST00000569341 PLCL1Q15111 1095 aa6.52□□□□□ -1.37
CFDP1-208ENST00000569341 USPL1Q5W0Q7 1092 aa6.52□□□□□ -1.37
CFDP1-208ENST00000569341 DAGLAQ9Y4D2 1042 aa6.52□□□□□ -1.37
CFDP1-208ENST00000569341 FKBP4Q02790 459 aaKnown RBP eCLIP6.51□□□□□ -1.37
CFDP1-208ENST00000569341 ZNF124Q15973 351 aa6.51□□□□□ -1.37
CFDP1-208ENST00000569341 HP1BP3Q5SSJ5 553 aaPredicted RBP6.51□□□□□ -1.37
CFDP1-208ENST00000569341 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
CFDP1-208ENST00000569341 ZNF576Q9H609 170 aa6.51□□□□□ -1.37
CFDP1-208ENST00000569341 U3KQE9 123 aa6.51□□□□□ -1.37
CFDP1-208ENST00000569341 SYNGAP1Q96PV0 1343 aa6.5□□□□□ -1.37
CFDP1-208ENST00000569341 RSF1Q96T23 1441 aaPredicted RBP6.5□□□□□ -1.37
CFDP1-208ENST00000569341 CD8BP10966 210 aa6.5□□□□□ -1.37
CFDP1-208ENST00000569341 ITPKAP23677 461 aa6.5□□□□□ -1.37
CFDP1-208ENST00000569341 SF3B2Q13435 895 aaKnown RBP6.5□□□□□ -1.37
CFDP1-208ENST00000569341 STK11IPQ8N1F8 1099 aa6.5□□□□□ -1.37
CFDP1-208ENST00000569341 PLD6Q8N2A8 252 aaKnown RBP6.5□□□□□ -1.37
CFDP1-208ENST00000569341 GLIS3Q8NEA6 775 aa6.5□□□□□ -1.37
CFDP1-208ENST00000569341 CORO1BQ9BR76 489 aa6.5□□□□□ -1.37
CFDP1-208ENST00000569341 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
CFDP1-208ENST00000569341 ZFYVE1Q9HBF4 777 aa6.5□□□□□ -1.37
CFDP1-208ENST00000569341 ADAMTS6Q9UKP5 1117 aa6.5□□□□□ -1.37
CFDP1-208ENST00000569341 TMPRSS2O15393 492 aa6.49□□□□□ -1.37
CFDP1-208ENST00000569341 FUT4P22083 530 aa6.49□□□□□ -1.37
CFDP1-208ENST00000569341 WDR89Q96FK6 387 aaPredicted RBP6.49□□□□□ -1.37
CFDP1-208ENST00000569341 ANO2Q9NQ90 1003 aa6.49□□□□□ -1.37
CFDP1-208ENST00000569341 MBNL3Q9NUK0 354 aaKnown RBP6.49□□□□□ -1.37
CFDP1-208ENST00000569341 BIN1O00499 593 aa6.48□□□□□ -1.37
CFDP1-208ENST00000569341 RNASE1P07998 156 aaKnown RBP6.48□□□□□ -1.37
CFDP1-208ENST00000569341 CD96P40200 585 aa6.48□□□□□ -1.37
CFDP1-208ENST00000569341 CDK5R2Q13319 367 aa6.48□□□□□ -1.37
CFDP1-208ENST00000569341 CYP27C1Q4G0S4 372 aa6.48□□□□□ -1.37
CFDP1-208ENST00000569341 ATG4DQ86TL0 474 aaPredicted RBP6.48□□□□□ -1.37
CFDP1-208ENST00000569341 FAM181AQ8N9Y4 354 aa6.48□□□□□ -1.37
CFDP1-208ENST00000569341 NETO1Q8TDF5 533 aa6.48□□□□□ -1.37
CFDP1-208ENST00000569341 MISP3Q96FF7 219 aa6.48□□□□□ -1.37
CFDP1-208ENST00000569341 CRIM1Q9NZV1 1036 aa6.48□□□□□ -1.37
CFDP1-208ENST00000569341 BICRAQ9NZM4 1560 aa6.48□□□□□ -1.37
CFDP1-208ENST00000569341 DBX1A6NMT0 343 aa6.47□□□□□ -1.37
CFDP1-208ENST00000569341 FAM87AP0C7U9 286 aa6.47□□□□□ -1.37
CFDP1-208ENST00000569341 LIG1P18858 919 aa6.47□□□□□ -1.37
CFDP1-208ENST00000569341 ZNF211Q13398 564 aaPredicted RBP6.47□□□□□ -1.37
CFDP1-208ENST00000569341 PDE3AQ14432 1141 aa6.47□□□□□ -1.37
CFDP1-208ENST00000569341 ECM1Q16610 540 aa6.47□□□□□ -1.37
CFDP1-208ENST00000569341 SPOCD1Q6ZMY3 1216 aa6.47□□□□□ -1.37
CFDP1-208ENST00000569341 CCDC82Q8N4S0 544 aa6.47□□□□□ -1.37
CFDP1-208ENST00000569341 CARNS1A5YM72 827 aa6.46□□□□□ -1.38
CFDP1-208ENST00000569341 FBLN7Q53RD9 439 aa6.46□□□□□ -1.38
CFDP1-208ENST00000569341 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
CFDP1-208ENST00000569341 FAM168AQ92567 244 aa6.46□□□□□ -1.38
CFDP1-208ENST00000569341 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
CFDP1-208ENST00000569341 CCDC86Q9H6F5 360 aaKnown RBP6.46□□□□□ -1.38
CFDP1-208ENST00000569341 RC3H2Q9HBD1 1191 aaKnown RBP6.46□□□□□ -1.38
CFDP1-208ENST00000569341 PCDHGC5Q9Y5F6 944 aa6.46□□□□□ -1.38
CFDP1-208ENST00000569341 ZNF862O60290 1169 aa6.45□□□□□ -1.38
CFDP1-208ENST00000569341 FARP2O94887 1054 aaPredicted RBP6.45□□□□□ -1.38
CFDP1-208ENST00000569341 ABL1P00519 1130 aa6.45□□□□□ -1.38
CFDP1-208ENST00000569341 PTPN12Q05209 780 aaKnown RBP6.45□□□□□ -1.38
CFDP1-208ENST00000569341 AP3B2Q13367 1082 aa6.45□□□□□ -1.38
CFDP1-208ENST00000569341 LRRN4CLQ8ND94 238 aa6.45□□□□□ -1.38
CFDP1-208ENST00000569341 ABCB6Q9NP58 842 aa6.45□□□□□ -1.38
CFDP1-208ENST00000569341 DISC1Q9NRI5 854 aa6.45□□□□□ -1.38
CFDP1-208ENST00000569341 VAV3Q9UKW4 847 aa6.45□□□□□ -1.38
CFDP1-208ENST00000569341 PLAGL2Q9UPG8 496 aa6.45□□□□□ -1.38
CFDP1-208ENST00000569341 LEFTY1O75610 366 aa6.44□□□□□ -1.38
CFDP1-208ENST00000569341 PRKCQQ04759 706 aa6.44□□□□□ -1.38
CFDP1-208ENST00000569341 FAAP100Q0VG06 881 aa6.44□□□□□ -1.38
CFDP1-208ENST00000569341 TMEM40Q8WWA1 233 aa6.44□□□□□ -1.38
CFDP1-208ENST00000569341 ZC3H12CQ9C0D7 883 aaKnown RBP6.44□□□□□ -1.38
CFDP1-208ENST00000569341 EHD4Q9H223 541 aa6.44□□□□□ -1.38
CFDP1-208ENST00000569341 NPHS2Q9NP85 383 aa6.44□□□□□ -1.38
CFDP1-208ENST00000569341 LOC105371045A0A1W2PR82 267 aa6.43□□□□□ -1.38
CFDP1-208ENST00000569341 ZNF157P51786 506 aaPredicted RBP6.43□□□□□ -1.38
CFDP1-208ENST00000569341 OXCT1P55809 520 aa6.43□□□□□ -1.38
CFDP1-208ENST00000569341 MESP2Q0VG99 397 aa6.43□□□□□ -1.38
CFDP1-208ENST00000569341 ORC1Q13415 861 aa6.43□□□□□ -1.38
CFDP1-208ENST00000569341 MTMR7Q9Y216 660 aa6.43□□□□□ -1.38
CFDP1-208ENST00000569341 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
CFDP1-208ENST00000569341 ID3Q02535 119 aa6.42□□□□□ -1.38
CFDP1-208ENST00000569341 AOC3Q16853 763 aa6.42□□□□□ -1.38
CFDP1-208ENST00000569341 KIF4BQ2VIQ3 1234 aa6.42□□□□□ -1.38
CFDP1-208ENST00000569341 PRPF40BQ6NWY9 871 aaKnown RBP6.42□□□□□ -1.38
CFDP1-208ENST00000569341 CILP2Q8IUL8 1156 aa6.42□□□□□ -1.38
CFDP1-208ENST00000569341 SMYD4Q8IYR2 804 aaPredicted RBP6.42□□□□□ -1.38
CFDP1-208ENST00000569341 PI4K2BQ8TCG2 481 aa6.42□□□□□ -1.38
CFDP1-208ENST00000569341 ATXN3LQ9H3M9 355 aa6.42□□□□□ -1.38
CFDP1-208ENST00000569341 MKNK2Q9HBH9 465 aa6.42□□□□□ -1.38
CFDP1-208ENST00000569341 ICMTO60725 284 aa6.41□□□□□ -1.38
CFDP1-208ENST00000569341 TTLL4Q14679 1199 aa6.41□□□□□ -1.38
CFDP1-208ENST00000569341 IFI16Q16666 785 aaKnown RBP6.41□□□□□ -1.38
CFDP1-208ENST00000569341 RPS26P11Q5JNZ5 115 aaPredicted RBP6.41□□□□□ -1.38
CFDP1-208ENST00000569341 DUSP23Q9BVJ7 150 aa6.41□□□□□ -1.38
CFDP1-208ENST00000569341 PIDD1Q9HB75 910 aa6.41□□□□□ -1.38
CFDP1-208ENST00000569341 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.41□□□□□ -1.38
CFDP1-208ENST00000569341 TMEM238LA0A1B0GVL6 79 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms