RNA–Protein interactions for RNA: ENST00000569038.5

USP10-215, Transcript of ubiquitin specific peptidase 10, human

TSL 3

Gene USP10, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP10-215	ENST00000569038	TNPO2	O14787	897 aa	Known RBP	13.75	□□□□□ -0.21
USP10-215	ENST00000569038	PDE8A	O60658	829 aa		13.75	□□□□□ -0.21
USP10-215	ENST00000569038	PRR29	P0C7W0	189 aa		13.75	□□□□□ -0.21
USP10-215	ENST00000569038	GRIN2C	Q14957	1233 aa		13.75	□□□□□ -0.21
USP10-215	ENST00000569038	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.75	□□□□□ -0.21
USP10-215	ENST00000569038	TDRD3	Q9H7E2	651 aa	Known RBP	13.75	□□□□□ -0.21
USP10-215	ENST00000569038	TAOK2	Q9UL54	1235 aa		13.75	□□□□□ -0.21
USP10-215	ENST00000569038	LEMD3	Q9Y2U8	911 aa		13.75	□□□□□ -0.21
USP10-215	ENST00000569038	TCP10L2	B9ZVM9	353 aa		13.74	□□□□□ -0.21
USP10-215	ENST00000569038	HSPA5	P11021	654 aa	Known RBP	13.74	□□□□□ -0.21
USP10-215	ENST00000569038	FXR2	P51116	673 aa	Known RBP eCLIP	13.74	□□□□□ -0.21	1e-6	■■□□□ 14.2
USP10-215	ENST00000569038	GPAT2	Q6NUI2	795 aa		13.74	□□□□□ -0.21
USP10-215	ENST00000569038	NECAB3	Q96P71	396 aa	Predicted RBP	13.74	□□□□□ -0.21
USP10-215	ENST00000569038	THEG	Q9P2T0	379 aa		13.74	□□□□□ -0.21
USP10-215	ENST00000569038	TSPYL4	Q9UJ04	414 aa		13.74	□□□□□ -0.21
USP10-215	ENST00000569038	HMGCR	P04035	888 aa		13.73	□□□□□ -0.21
USP10-215	ENST00000569038	HSP90B1	P14625	803 aa	Known RBP	13.73	□□□□□ -0.21
USP10-215	ENST00000569038	RBM5	P52756	815 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
USP10-215	ENST00000569038	FKBP1A	P62942	108 aa	Known RBP	13.73	□□□□□ -0.21
USP10-215	ENST00000569038	MRPS5	P82675	430 aa	Known RBP	13.73	□□□□□ -0.21
USP10-215	ENST00000569038	JARID2	Q92833	1246 aa	Predicted RBP	13.73	□□□□□ -0.21
USP10-215	ENST00000569038	CDC5L	Q99459	802 aa	Known RBP	13.73	□□□□□ -0.21
USP10-215	ENST00000569038	P2RX7	Q99572	595 aa	Known RBP	13.73	□□□□□ -0.21
USP10-215	ENST00000569038	HMX1	Q9NP08	348 aa	Predicted RBP	13.73	□□□□□ -0.21
USP10-215	ENST00000569038	CHPF2	Q9P2E5	772 aa		13.73	□□□□□ -0.21
USP10-215	ENST00000569038	TCF20	Q9UGU0	1960 aa	Known RBP	13.72	□□□□□ -0.21
USP10-215	ENST00000569038	MRE11	P49959	708 aa		13.72	□□□□□ -0.21
USP10-215	ENST00000569038	EPHX3	Q9H6B9	360 aa		13.72	□□□□□ -0.21
USP10-215	ENST00000569038	NUDC	Q9Y266	331 aa		13.72	□□□□□ -0.21
USP10-215	ENST00000569038	PCCA	P05165	728 aa	Predicted RBP	13.71	□□□□□ -0.21
USP10-215	ENST00000569038	PIP4P2	Q8N4L2	257 aa		13.71	□□□□□ -0.21
USP10-215	ENST00000569038	XIRP2	A4UGR9	3374 aa		13.71	□□□□□ -0.22
USP10-215	ENST00000569038	PLXNB2	O15031	1838 aa		13.7	□□□□□ -0.22
USP10-215	ENST00000569038	INPP5B	P32019	993 aa		13.7	□□□□□ -0.22
USP10-215	ENST00000569038	POTEE	Q6S8J3	1075 aa		13.7	□□□□□ -0.22
USP10-215	ENST00000569038	CFAP53	Q96M91	514 aa		13.7	□□□□□ -0.22
USP10-215	ENST00000569038	JAG2	Q9Y219	1238 aa		13.7	□□□□□ -0.22
USP10-215	ENST00000569038	MYH3	P11055	1940 aa		13.7	□□□□□ -0.22
USP10-215	ENST00000569038	AK9	Q5TCS8	1911 aa		13.7	□□□□□ -0.22
USP10-215	ENST00000569038	TNNI2	P48788	182 aa		13.69	□□□□□ -0.22
USP10-215	ENST00000569038	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	8e-7	■■■■□ 22.3
USP10-215	ENST00000569038	TMEM31	Q5JXX7	168 aa		13.69	□□□□□ -0.22
USP10-215	ENST00000569038	MAP3K21	Q5TCX8	1036 aa		13.69	□□□□□ -0.22
USP10-215	ENST00000569038	DZIP1L	Q8IYY4	767 aa	Known RBP	13.69	□□□□□ -0.22
USP10-215	ENST00000569038	PPM1E	Q8WY54	764 aa		13.69	□□□□□ -0.22
USP10-215	ENST00000569038	COA7	Q96BR5	231 aa		13.69	□□□□□ -0.22
USP10-215	ENST00000569038	GREM2	Q9H772	168 aa		13.69	□□□□□ -0.22
USP10-215	ENST00000569038	C11orf16	Q9NQ32	467 aa		13.69	□□□□□ -0.22
USP10-215	ENST00000569038	REV3L	O60673	3130 aa		13.68	□□□□□ -0.22
USP10-215	ENST00000569038	IL1R1	P14778	569 aa		13.68	□□□□□ -0.22
USP10-215	ENST00000569038	CTSW	P56202	376 aa		13.68	□□□□□ -0.22
USP10-215	ENST00000569038	KRT24	Q2M2I5	525 aa		13.68	□□□□□ -0.22
USP10-215	ENST00000569038	TTLL11	Q8NHH1	800 aa		13.68	□□□□□ -0.22
USP10-215	ENST00000569038	SERPINA10	Q9UK55	444 aa		13.68	□□□□□ -0.22
USP10-215	ENST00000569038	FRMPD3	Q5JV73	1810 aa		13.67	□□□□□ -0.22
USP10-215	ENST00000569038	SNAP23	O00161	211 aa		13.67	□□□□□ -0.22
USP10-215	ENST00000569038	BMP1	P13497	986 aa		13.67	□□□□□ -0.22
USP10-215	ENST00000569038	CNGB1	Q14028	1251 aa	Predicted RBP	13.67	□□□□□ -0.22
USP10-215	ENST00000569038	AKNAD1	Q5T1N1	836 aa		13.67	□□□□□ -0.22
USP10-215	ENST00000569038	TRIB2	Q92519	343 aa		13.67	□□□□□ -0.22
USP10-215	ENST00000569038	GJD2	Q9UKL4	321 aa		13.67	□□□□□ -0.22
USP10-215	ENST00000569038		A0A1B0GUL6	1792 aa		13.67	□□□□□ -0.22
USP10-215	ENST00000569038	CACNB3	P54284	484 aa		13.66	□□□□□ -0.22
USP10-215	ENST00000569038	NFE2L2	Q16236	605 aa		13.66	□□□□□ -0.22
USP10-215	ENST00000569038	LHX8	Q68G74	356 aa		13.66	□□□□□ -0.22
USP10-215	ENST00000569038	C15orf52	Q6ZUT6	534 aa	Known RBP	13.66	□□□□□ -0.22
USP10-215	ENST00000569038	RIC3	Q7Z5B4	369 aa		13.66	□□□□□ -0.22
USP10-215	ENST00000569038	ANKRD2	Q9GZV1	360 aa		13.66	□□□□□ -0.22
USP10-215	ENST00000569038	PTPRF	P10586	1907 aa		13.65	□□□□□ -0.22
USP10-215	ENST00000569038	PDE3A	Q14432	1141 aa		13.65	□□□□□ -0.22
USP10-215	ENST00000569038	CCDC191	Q8NCU4	936 aa		13.65	□□□□□ -0.22
USP10-215	ENST00000569038	IL27	Q8NEV9	243 aa		13.65	□□□□□ -0.22
USP10-215	ENST00000569038	PLEKHF1	Q96S99	279 aa		13.65	□□□□□ -0.22
USP10-215	ENST00000569038	ZNF341	Q9BYN7	854 aa		13.65	□□□□□ -0.22
USP10-215	ENST00000569038	BABAM1	Q9NWV8	329 aa		13.65	□□□□□ -0.22
USP10-215	ENST00000569038	ZNF112	Q9UJU3	913 aa		13.65	□□□□□ -0.22
USP10-215	ENST00000569038	TTF2	Q9UNY4	1162 aa	Known RBP	13.65	□□□□□ -0.22
USP10-215	ENST00000569038	CXCL11	O14625	94 aa		13.64	□□□□□ -0.23
USP10-215	ENST00000569038	GPR37L1	O60883	481 aa		13.64	□□□□□ -0.23
USP10-215	ENST00000569038	PRKAR2A	P13861	404 aa	Known RBP	13.64	□□□□□ -0.23
USP10-215	ENST00000569038	MIGA2	Q7L4E1	593 aa		13.64	□□□□□ -0.23
USP10-215	ENST00000569038	ANKRD13C	Q8N6S4	541 aa		13.64	□□□□□ -0.23
USP10-215	ENST00000569038	MYD88	Q99836	296 aa		13.64	□□□□□ -0.23
USP10-215	ENST00000569038	ZNF576	Q9H609	170 aa		13.64	□□□□□ -0.23
USP10-215	ENST00000569038	SLC45A1	Q9Y2W3	748 aa		13.64	□□□□□ -0.23
USP10-215	ENST00000569038		A0A0G2JLL6	359 aa	Predicted RBP	13.63	□□□□□ -0.23
USP10-215	ENST00000569038	DNAJB2	P25686	324 aa		13.63	□□□□□ -0.23
USP10-215	ENST00000569038	CRK	P46108	304 aa		13.63	□□□□□ -0.23
USP10-215	ENST00000569038	KCNJ4	P48050	445 aa		13.63	□□□□□ -0.23
USP10-215	ENST00000569038	NOL9	Q5SY16	702 aa	Known RBP	13.63	□□□□□ -0.23
USP10-215	ENST00000569038	DCAF15	Q66K64	600 aa		13.63	□□□□□ -0.23
USP10-215	ENST00000569038	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.63	□□□□□ -0.23
USP10-215	ENST00000569038	BAD	Q92934	168 aa		13.63	□□□□□ -0.23
USP10-215	ENST00000569038	CWC25	Q9NXE8	425 aa	Predicted RBP	13.63	□□□□□ -0.23
USP10-215	ENST00000569038	PRKAG2	Q9UGJ0	569 aa		13.63	□□□□□ -0.23
USP10-215	ENST00000569038	CHD9	Q3L8U1	2897 aa		13.63	□□□□□ -0.23
USP10-215	ENST00000569038	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.62	□□□□□ -0.23
USP10-215	ENST00000569038	FAM86C2P	A6NEL3	165 aa		13.62	□□□□□ -0.23
USP10-215	ENST00000569038	IGHMBP2	P38935	993 aa	Known RBP	13.62	□□□□□ -0.23
USP10-215	ENST00000569038	CHRND	Q07001	517 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms