RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ANKRD23Q86SG2 305 aa19.73■□□□□ 0.75
HERPUD1-215ENST00000568676 FAM151AQ8WW52 585 aa19.73■□□□□ 0.75
HERPUD1-215ENST00000568676 LPIN2Q92539 896 aa19.73■□□□□ 0.75
HERPUD1-215ENST00000568676 SLC5A1P13866 664 aa19.72■□□□□ 0.75
HERPUD1-215ENST00000568676 FBXO3Q9UK99 471 aa19.72■□□□□ 0.75
HERPUD1-215ENST00000568676 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
HERPUD1-215ENST00000568676 C17orf99Q6UX52 265 aa19.71■□□□□ 0.75
HERPUD1-215ENST00000568676 MRPL50Q8N5N7 158 aaKnown RBP19.71■□□□□ 0.75
HERPUD1-215ENST00000568676 ZNF112Q9UJU3 913 aa19.71■□□□□ 0.75
HERPUD1-215ENST00000568676 KCNH4Q9UQ05 1017 aa19.71■□□□□ 0.75
HERPUD1-215ENST00000568676 EYA2O00167 538 aa19.7■□□□□ 0.74
HERPUD1-215ENST00000568676 NKX2-3Q8TAU0 364 aa19.7■□□□□ 0.74
HERPUD1-215ENST00000568676 USP44Q9H0E7 712 aa19.7■□□□□ 0.74
HERPUD1-215ENST00000568676 ZNF521Q96K83 1311 aa19.7■□□□□ 0.74
HERPUD1-215ENST00000568676 FXR1P51114 621 aaKnown RBP eCLIP19.69■□□□□ 0.74
HERPUD1-215ENST00000568676 NOL9Q5SY16 702 aaKnown RBP19.69■□□□□ 0.74
HERPUD1-215ENST00000568676 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.69■□□□□ 0.74
HERPUD1-215ENST00000568676 KLHDC4Q8TBB5 520 aa19.69■□□□□ 0.74
HERPUD1-215ENST00000568676 SH3TC2Q8TF17 1288 aa19.69■□□□□ 0.74
HERPUD1-215ENST00000568676 ARHGAP39Q9C0H5 1083 aa19.69■□□□□ 0.74
HERPUD1-215ENST00000568676 SRRDQ9UH36 339 aa19.69■□□□□ 0.74
HERPUD1-215ENST00000568676 PDHXO00330 501 aa19.68■□□□□ 0.74
HERPUD1-215ENST00000568676 ZBTB22O15209 634 aa19.68■□□□□ 0.74
HERPUD1-215ENST00000568676 MIGA2Q7L4E1 593 aa19.68■□□□□ 0.74
HERPUD1-215ENST00000568676 FAM9BQ8IZU0 186 aa19.68■□□□□ 0.74
HERPUD1-215ENST00000568676 GNL3LQ9NVN8 582 aaKnown RBP19.68■□□□□ 0.74
HERPUD1-215ENST00000568676 SEMA3EO15041 775 aa19.67■□□□□ 0.74
HERPUD1-215ENST00000568676 INPP5BP32019 993 aa19.67■□□□□ 0.74
HERPUD1-215ENST00000568676 PSMC4P43686 418 aa19.67■□□□□ 0.74
HERPUD1-215ENST00000568676 DAGLAQ9Y4D2 1042 aa19.67■□□□□ 0.74
HERPUD1-215ENST00000568676 SALL1Q9NSC2 1324 aa19.67■□□□□ 0.74
HERPUD1-215ENST00000568676 E9PSI1 815 aa19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 CXCL11O14625 94 aa19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 LDHBP07195 334 aaKnown RBP19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 CAPN2P17655 700 aa19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 RFX5P48382 616 aaPredicted RBP19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 CDC42EP5Q6NZY7 148 aa19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 RAET1EQ8TD07 263 aa19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 TRIM47Q96LD4 638 aa19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 PARK7Q99497 189 aaKnown RBP19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 CPA4Q9UI42 421 aa19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 HDAC5Q9UQL6 1122 aa19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 COLQQ9Y215 455 aaPredicted RBP19.66■□□□□ 0.74
HERPUD1-215ENST00000568676 MYH13Q9UKX3 1938 aa19.65■□□□□ 0.74
HERPUD1-215ENST00000568676 CIAO1O76071 339 aa19.65■□□□□ 0.74
HERPUD1-215ENST00000568676 FMNL1O95466 1100 aaPredicted RBP19.65■□□□□ 0.74
HERPUD1-215ENST00000568676 GRK4P32298 578 aa19.65■□□□□ 0.74
HERPUD1-215ENST00000568676 ZGPATQ8N5A5 531 aaKnown RBP19.65■□□□□ 0.74
HERPUD1-215ENST00000568676 DENND2AQ9ULE3 1009 aa19.65■□□□□ 0.74
HERPUD1-215ENST00000568676 ADGRA2Q96PE1 1338 aa19.65■□□□□ 0.74
HERPUD1-215ENST00000568676 MYCP01106 439 aaPredicted RBP19.64■□□□□ 0.73
HERPUD1-215ENST00000568676 OSBPP22059 807 aa19.64■□□□□ 0.73
HERPUD1-215ENST00000568676 TCP10Q12799 353 aa19.64■□□□□ 0.73
HERPUD1-215ENST00000568676 ALDH1L2Q3SY69 923 aa19.64■□□□□ 0.73
HERPUD1-215ENST00000568676 FASTKD5Q7L8L6 764 aaKnown RBP19.64■□□□□ 0.73
HERPUD1-215ENST00000568676 SSH1Q8WYL5 1049 aa19.64■□□□□ 0.73
HERPUD1-215ENST00000568676 CEP126Q9P2H0 1117 aa19.64■□□□□ 0.73
HERPUD1-215ENST00000568676 MYPNQ86TC9 1320 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 GJB1P08034 283 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 PRDX5P30044 214 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 FCGRTP55899 365 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 UBXN2AP68543 259 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 DIXDC1Q155Q3 683 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 ATP2B3Q16720 1220 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 ATG9AQ7Z3C6 839 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 HTATIP2Q9BUP3 242 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 USP40Q9NVE5 1235 aa19.63■□□□□ 0.73
HERPUD1-215ENST00000568676 H0YGN5 161 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 ENTPD3O75355 529 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 GJA8P48165 433 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 NFIAQ12857 509 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 MOGSQ13724 837 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 SLF2Q8IX21 1173 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 IDI2Q9BXS1 227 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 FAM198AQ9UFP1 575 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 SLC45A1Q9Y2W3 748 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 ZSWIM8A7E2V4 1837 aa19.62■□□□□ 0.73
HERPUD1-215ENST00000568676 UBTFL1P0CB47 393 aaPredicted RBP19.61■□□□□ 0.73
HERPUD1-215ENST00000568676 BCRP11274 1271 aa19.61■□□□□ 0.73
HERPUD1-215ENST00000568676 CTGFP29279 349 aa19.61■□□□□ 0.73
HERPUD1-215ENST00000568676 IL15P40933 162 aaPredicted RBP19.61■□□□□ 0.73
HERPUD1-215ENST00000568676 MTFR1Q15390 333 aa19.61■□□□□ 0.73
HERPUD1-215ENST00000568676 SCYL3Q8IZE3 742 aa19.61■□□□□ 0.73
HERPUD1-215ENST00000568676 SLAIN1Q8ND83 568 aa19.61■□□□□ 0.73
HERPUD1-215ENST00000568676 SHISA4Q96DD7 197 aa19.61■□□□□ 0.73
HERPUD1-215ENST00000568676 PICK1Q9NRD5 415 aa19.61■□□□□ 0.73
HERPUD1-215ENST00000568676 PDS5AQ29RF7 1337 aaKnown RBP19.6■□□□□ 0.73
HERPUD1-215ENST00000568676 ATRNL1Q5VV63 1379 aa19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 A0A0G2JLL6 359 aaPredicted RBP19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 CCL5P13501 91 aa19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 MAP3K10Q02779 954 aa19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 GPAT2Q6NUI2 795 aa19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 PRRT2Q7Z6L0 340 aaPredicted RBP19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 DPF3Q92784 378 aa19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 RNF208Q9H0X6 261 aa19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 BIN2Q9UBW5 565 aaPredicted RBP19.59■□□□□ 0.73
HERPUD1-215ENST00000568676 GAKO14976 1311 aa19.58■□□□□ 0.73
HERPUD1-215ENST00000568676 PHF20L1A8MW92 1017 aa19.58■□□□□ 0.72
HERPUD1-215ENST00000568676 UBE2Q1Q7Z7E8 422 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms