RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 DNAJC5GQ8N7S2 189 aa10.21□□□□□ -0.77
SF3B3-212ENST00000568539 FAM163AQ96GL9 167 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-212ENST00000568539 MRIQ9BWK5 157 aa10.21□□□□□ -0.77
SF3B3-212ENST00000568539 MAST3O60307 1309 aa10.21□□□□□ -0.78
SF3B3-212ENST00000568539 ZNF532Q9HCE3 1301 aa10.21□□□□□ -0.78
SF3B3-212ENST00000568539 ZNF646O15015 1829 aaPredicted RBP10.21□□□□□ -0.78
SF3B3-212ENST00000568539 MROH7-TTC4A0A0A0MT08 1334 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 GLTPD2A6NH11 291 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 HIP1O00291 1037 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 GAKO14976 1311 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 CDC45O75419 566 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 SLC34A2O95436 690 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 CYP7A1P22680 504 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 MMP14P50281 582 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 SCNN1DP51172 638 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 ZNF280AP59817 542 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-212ENST00000568539 GSTO1P78417 241 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 HDLBPQ00341 1268 aaKnown RBP10.2□□□□□ -0.78
SF3B3-212ENST00000568539 ZMYM1Q5SVZ6 1142 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 DPY19L2Q6NUT2 758 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 TIAM2Q8IVF5 1701 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 APPBP2Q92624 585 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 FAM227BQ96M60 508 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 DIAPH3Q9NSV4 1193 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 SERPINA10Q9UK55 444 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 AKAP11Q9UKA4 1901 aa10.2□□□□□ -0.78
SF3B3-212ENST00000568539 SCN9AQ15858 1988 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 A0A0D9SFI3 127 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 SHTN1A0MZ66 631 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 LDHCP07864 332 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 CRKP46108 304 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 NMIQ13287 307 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-212ENST00000568539 HHIPL2Q6UWX4 724 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 MICALL2Q8IY33 904 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 OGFOD1Q8N543 542 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 OSBP2Q969R2 916 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 TEKT1Q969V4 418 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 L3MBTL3Q96JM7 780 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-212ENST00000568539 ZDHHC15Q96MV8 337 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 PUS7LQ9H0K6 701 aaKnown RBP10.19□□□□□ -0.78
SF3B3-212ENST00000568539 GPRC5DQ9NZD1 345 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 CNOT7Q9UIV1 285 aaKnown RBP10.19□□□□□ -0.78
SF3B3-212ENST00000568539 HDAC9Q9UKV0 1011 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 PCDHB8Q9UN66 801 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 DAGLAQ9Y4D2 1042 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 PCDHB13Q9Y5F0 798 aa10.19□□□□□ -0.78
SF3B3-212ENST00000568539 GPR75-ASB3A0A0A6YYF3 556 aa10.18□□□□□ -0.78
SF3B3-212ENST00000568539 APOBEC3HQ6NTF7 200 aaKnown RBP10.18□□□□□ -0.78
SF3B3-212ENST00000568539 CWC27Q6UX04 472 aaKnown RBP10.18□□□□□ -0.78
SF3B3-212ENST00000568539 MIGA1Q8NAN2 632 aa10.18□□□□□ -0.78
SF3B3-212ENST00000568539 MTMR14Q8NCE2 650 aa10.18□□□□□ -0.78
SF3B3-212ENST00000568539 SEC62Q99442 399 aaKnown RBP10.18□□□□□ -0.78
SF3B3-212ENST00000568539 RIOK1Q9BRS2 568 aaKnown RBP10.18□□□□□ -0.78
SF3B3-212ENST00000568539 IL25Q9H293 177 aa10.18□□□□□ -0.78
SF3B3-212ENST00000568539 HELLSQ9NRZ9 838 aa10.18□□□□□ -0.78
SF3B3-212ENST00000568539 PCDHAC2Q9Y5I4 1007 aa10.18□□□□□ -0.78
SF3B3-212ENST00000568539 SBF1O95248 1867 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 DOCK2Q92608 1830 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 RAD50Q92878 1312 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 MAGEB6P1A0A0J9YX57 407 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 M0R2C6 588 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 EGFRP00533 1210 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 EPS15P42566 896 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 BTDP43251 543 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 APLP1P51693 650 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 PPP4CP60510 307 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 DYNLL1P63167 89 aaKnown RBP10.17□□□□□ -0.78
SF3B3-212ENST00000568539 DLGAP5Q15398 846 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 CFAP100Q494V2 611 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 CASC1Q6TDU7 716 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 RUFY2Q8WXA3 655 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 ZBED3Q96IU2 234 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-212ENST00000568539 ESYT1Q9BSJ8 1104 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 MYOZ2Q9NPC6 264 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 AATFQ9NY61 560 aaKnown RBP eCLIP10.17□□□□□ -0.78
SF3B3-212ENST00000568539 PSME4Q14997 1843 aa10.17□□□□□ -0.78
SF3B3-212ENST00000568539 MAST2Q6P0Q8 1798 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 H7C1D1 291 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 SGSM2O43147 1006 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 MBD4O95243 580 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 BAG3O95817 575 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 LMOD1P29536 600 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-212ENST00000568539 PSEN1P49768 467 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 RBM5P52756 815 aaKnown RBP eCLIP10.16□□□□□ -0.78
SF3B3-212ENST00000568539 RHBDL3P58872 404 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 CCDC129Q6ZRS4 1044 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 SAMD7Q7Z3H4 446 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 ZNF589Q86UQ0 364 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-212ENST00000568539 CERS3Q8IU89 383 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 LCORLQ8N3X6 602 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 AIDAQ96BJ3 306 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 KIF12Q96FN5 646 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 PRMT6Q96LA8 375 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-212ENST00000568539 STRBPQ96SI9 672 aaKnown RBP10.16□□□□□ -0.78
SF3B3-212ENST00000568539 NOL10Q9BSC4 688 aaKnown RBP10.16□□□□□ -0.78
SF3B3-212ENST00000568539 ARMT1Q9H993 441 aa10.16□□□□□ -0.78
SF3B3-212ENST00000568539 DICER1Q9UPY3 1922 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms