RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 INHBEP58166 350 aa17.8■□□□□ 0.44
CMTM3-215ENST00000568477 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
CMTM3-215ENST00000568477 CDC42EP5Q6NZY7 148 aa17.8■□□□□ 0.44
CMTM3-215ENST00000568477 DZIP1Q86YF9 867 aaKnown RBP17.8■□□□□ 0.44
CMTM3-215ENST00000568477 PANK1Q8TE04 598 aa17.8■□□□□ 0.44
CMTM3-215ENST00000568477 ELP3Q9H9T3 547 aa17.8■□□□□ 0.44
CMTM3-215ENST00000568477 OTOFQ9HC10 1997 aa17.79■□□□□ 0.44
CMTM3-215ENST00000568477 SURF6O75683 361 aaKnown RBP17.79■□□□□ 0.44
CMTM3-215ENST00000568477 TBC1D8O95759 1140 aa17.79■□□□□ 0.44
CMTM3-215ENST00000568477 ALDH1A1P00352 501 aa17.79■□□□□ 0.44
CMTM3-215ENST00000568477 SLF2Q8IX21 1173 aa17.79■□□□□ 0.44
CMTM3-215ENST00000568477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
CMTM3-215ENST00000568477 FAM151AQ8WW52 585 aa17.79■□□□□ 0.44
CMTM3-215ENST00000568477 GPR108Q9NPR9 543 aa17.79■□□□□ 0.44
CMTM3-215ENST00000568477 CSADQ9Y600 493 aa17.79■□□□□ 0.44
CMTM3-215ENST00000568477 GAKO14976 1311 aa17.78■□□□□ 0.44
CMTM3-215ENST00000568477 ARID4AP29374 1257 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-215ENST00000568477 VGLL4Q14135 290 aa17.78■□□□□ 0.44
CMTM3-215ENST00000568477 DCAF15Q66K64 600 aa17.78■□□□□ 0.44
CMTM3-215ENST00000568477 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-215ENST00000568477 SPATA5Q8NB90 893 aa17.78■□□□□ 0.44
CMTM3-215ENST00000568477 USP40Q9NVE5 1235 aa17.78■□□□□ 0.44
CMTM3-215ENST00000568477 HMG20BQ9P0W2 317 aa17.78■□□□□ 0.44
CMTM3-215ENST00000568477 UQCRFS1P1P0C7P4 283 aa17.77■□□□□ 0.44
CMTM3-215ENST00000568477 GJA5P36382 358 aa17.77■□□□□ 0.44
CMTM3-215ENST00000568477 TCP10Q12799 353 aa17.77■□□□□ 0.44
CMTM3-215ENST00000568477 TNNI3KQ59H18 835 aa17.77■□□□□ 0.44
CMTM3-215ENST00000568477 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
CMTM3-215ENST00000568477 IFNL1Q8IU54 200 aa17.77■□□□□ 0.44
CMTM3-215ENST00000568477 OPTNQ96CV9 577 aa17.77■□□□□ 0.44
CMTM3-215ENST00000568477 CFHR5Q9BXR6 569 aa17.77■□□□□ 0.44
CMTM3-215ENST00000568477 NOP58Q9Y2X3 529 aaKnown RBP17.77■□□□□ 0.44
CMTM3-215ENST00000568477 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.44
CMTM3-215ENST00000568477 GPR25O00155 361 aa17.76■□□□□ 0.43
CMTM3-215ENST00000568477 NFIAQ12857 509 aa17.76■□□□□ 0.43
CMTM3-215ENST00000568477 NOM1Q5C9Z4 860 aaKnown RBP17.76■□□□□ 0.43
CMTM3-215ENST00000568477 CEP85Q6P2H3 762 aa17.76■□□□□ 0.43
CMTM3-215ENST00000568477 CTU1Q7Z7A3 348 aaKnown RBP17.76■□□□□ 0.43
CMTM3-215ENST00000568477 ZNF296Q8WUU4 475 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-215ENST00000568477 WRNIP1Q96S55 665 aa17.76■□□□□ 0.43
CMTM3-215ENST00000568477 ZNF341Q9BYN7 854 aa17.76■□□□□ 0.43
CMTM3-215ENST00000568477 MYH2Q9UKX2 1941 aa17.76■□□□□ 0.43
CMTM3-215ENST00000568477 IGF2BP3O00425 579 aaKnown RBP eCLIP17.75■□□□□ 0.43
CMTM3-215ENST00000568477 MECOMQ03112 1051 aa17.75■□□□□ 0.43
CMTM3-215ENST00000568477 OTUD7BQ6GQQ9 843 aa17.75■□□□□ 0.43
CMTM3-215ENST00000568477 PI16Q6UXB8 463 aa17.75■□□□□ 0.43
CMTM3-215ENST00000568477 FAM163AQ96GL9 167 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-215ENST00000568477 FAM198AQ9UFP1 575 aa17.75■□□□□ 0.43
CMTM3-215ENST00000568477 RCAN3Q9UKA8 241 aa17.75■□□□□ 0.43
CMTM3-215ENST00000568477 MROH7-TTC4A0A0A0MT08 1334 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 LAMB1P07942 1786 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 CCDC85CA6NKD9 419 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 MCAMP43121 646 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 BTDP43251 543 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 CCDC158Q5M9N0 1113 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 TTC39AQ5SRH9 613 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 OTUD5Q96G74 571 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 DBNDD2Q9BQY9 259 aa17.74■□□□□ 0.43
CMTM3-215ENST00000568477 TESPA1A2RU30 521 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-215ENST00000568477 SPDYE5A6NIY4 337 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 ENTPD3O75355 529 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 RGS3P49796 1198 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 GSTO1P78417 241 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 TBC1D9Q6ZT07 1266 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 MIGA2Q7L4E1 593 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 IDI2Q9BXS1 227 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 R3HDMLQ9H3Y0 253 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 RAI14Q9P0K7 980 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 DDX19BQ9UMR2 479 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 SNCAIPQ9Y6H5 919 aa17.73■□□□□ 0.43
CMTM3-215ENST00000568477 RFX7Q2KHR2 1363 aa17.72■□□□□ 0.43
CMTM3-215ENST00000568477 FKTNO75072 461 aa17.72■□□□□ 0.43
CMTM3-215ENST00000568477 LDHCP07864 332 aa17.72■□□□□ 0.43
CMTM3-215ENST00000568477 GTF2A2P52657 109 aa17.72■□□□□ 0.43
CMTM3-215ENST00000568477 ERO1BQ86YB8 467 aa17.72■□□□□ 0.43
CMTM3-215ENST00000568477 ZKSCAN4Q969J2 545 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-215ENST00000568477 MS4A4AQ96JQ5 239 aa17.72■□□□□ 0.43
CMTM3-215ENST00000568477 LRP2BPQ9P2M1 347 aa17.72■□□□□ 0.43
CMTM3-215ENST00000568477 AK9Q5TCS8 1911 aa17.72■□□□□ 0.43
CMTM3-215ENST00000568477 GPR75-ASB3A0A0A6YYF3 556 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 CCL15-CCL14A0A0B4J2E2 113 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 CCL15Q16663 113 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 ERC1Q8IUD2 1116 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 ZFPM1Q8IX07 1006 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 ZNF384Q8TF68 577 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 BRI3BPQ8WY22 251 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 NSUN4Q96CB9 384 aaKnown RBP17.71■□□□□ 0.43
CMTM3-215ENST00000568477 PTPN18Q99952 460 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 SNRKQ9NRH2 765 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 COG6Q9Y2V7 657 aa17.71■□□□□ 0.43
CMTM3-215ENST00000568477 WDHD1O75717 1129 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-215ENST00000568477 INPP5BP32019 993 aa17.7■□□□□ 0.42
CMTM3-215ENST00000568477 PPIL2Q13356 520 aa17.7■□□□□ 0.42
CMTM3-215ENST00000568477 ZSCAN29Q8IWY8 852 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-215ENST00000568477 ZNF512BQ96KM6 892 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-215ENST00000568477 CHMP4BQ9H444 224 aaKnown RBP17.7■□□□□ 0.42
CMTM3-215ENST00000568477 ZNF112Q9UJU3 913 aa17.7■□□□□ 0.42
CMTM3-215ENST00000568477 DBNLQ9UJU6 430 aaKnown RBP17.7■□□□□ 0.42
CMTM3-215ENST00000568477 EXOC6BQ9Y2D4 811 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 372.4 ms