RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 BCAMP50895 628 aa13.54□□□□□ -0.24
LINC01228-201ENST00000567966 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
LINC01228-201ENST00000567966 GORABQ5T7V8 394 aa13.54□□□□□ -0.24
LINC01228-201ENST00000567966 NBPF12Q5TAG4 269 aaPredicted RBP13.54□□□□□ -0.24
LINC01228-201ENST00000567966 CLMNQ96JQ2 1002 aa13.54□□□□□ -0.24
LINC01228-201ENST00000567966 NEUROD6Q96NK8 337 aa13.54□□□□□ -0.24
LINC01228-201ENST00000567966 TDRD3Q9H7E2 651 aaKnown RBP13.54□□□□□ -0.24
LINC01228-201ENST00000567966 TTF2Q9UNY4 1162 aaKnown RBP13.54□□□□□ -0.24
LINC01228-201ENST00000567966 COL1A1P02452 1464 aaPredicted RBP13.54□□□□□ -0.24
LINC01228-201ENST00000567966 MYO1BO43795 1136 aa13.53□□□□□ -0.24
LINC01228-201ENST00000567966 TBC1D8O95759 1140 aa13.53□□□□□ -0.24
LINC01228-201ENST00000567966 UQCRFS1P1P0C7P4 283 aa13.53□□□□□ -0.24
LINC01228-201ENST00000567966 TM4SF4P48230 202 aa13.53□□□□□ -0.24
LINC01228-201ENST00000567966 RASA3Q14644 834 aa13.53□□□□□ -0.24
LINC01228-201ENST00000567966 CCDC158Q5M9N0 1113 aa13.53□□□□□ -0.24
LINC01228-201ENST00000567966 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
LINC01228-201ENST00000567966 TBC1D22AQ8WUA7 517 aa13.53□□□□□ -0.24
LINC01228-201ENST00000567966 ZNF70Q9UC06 446 aaPredicted RBP13.53□□□□□ -0.24
LINC01228-201ENST00000567966 SUGT1Q9Y2Z0 365 aa13.53□□□□□ -0.24
LINC01228-201ENST00000567966 FRAT2O75474 233 aaPredicted RBP13.52□□□□□ -0.25
LINC01228-201ENST00000567966 CRKP46108 304 aa13.52□□□□□ -0.25
LINC01228-201ENST00000567966 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
LINC01228-201ENST00000567966 CCDC102BQ68D86 513 aa13.52□□□□□ -0.25
LINC01228-201ENST00000567966 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
LINC01228-201ENST00000567966 SMC5Q8IY18 1101 aa13.52□□□□□ -0.25
LINC01228-201ENST00000567966 WDR66Q8TBY9 1149 aa13.52□□□□□ -0.25
LINC01228-201ENST00000567966 EAF2Q96CJ1 260 aaPredicted RBP13.52□□□□□ -0.25
LINC01228-201ENST00000567966 R3HDMLQ9H3Y0 253 aa13.52□□□□□ -0.25
LINC01228-201ENST00000567966 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
LINC01228-201ENST00000567966 DENND2AQ9ULE3 1009 aa13.52□□□□□ -0.25
LINC01228-201ENST00000567966 PDS5AQ29RF7 1337 aaKnown RBP13.52□□□□□ -0.25
LINC01228-201ENST00000567966 USP2O75604 605 aaPredicted RBP13.51□□□□□ -0.25
LINC01228-201ENST00000567966 IFIT2P09913 472 aaKnown RBP13.51□□□□□ -0.25
LINC01228-201ENST00000567966 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
LINC01228-201ENST00000567966 SLC10A4Q96EP9 437 aa13.51□□□□□ -0.25
LINC01228-201ENST00000567966 CCDC136Q96JN2 1154 aa13.51□□□□□ -0.25
LINC01228-201ENST00000567966 MRIQ9BWK5 157 aa13.51□□□□□ -0.25
LINC01228-201ENST00000567966 SERPINA10Q9UK55 444 aa13.51□□□□□ -0.25
LINC01228-201ENST00000567966 PPP2R3BQ9Y5P8 575 aa13.51□□□□□ -0.25
LINC01228-201ENST00000567966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.51□□□□□ -0.25
LINC01228-201ENST00000567966 OTOFQ9HC10 1997 aa13.51□□□□□ -0.25
LINC01228-201ENST00000567966 TCP10L2B9ZVM9 353 aa13.5□□□□□ -0.25
LINC01228-201ENST00000567966 PITPNM1O00562 1244 aa13.5□□□□□ -0.25
LINC01228-201ENST00000567966 PPP1R12BO60237 982 aaPredicted RBP13.5□□□□□ -0.25
LINC01228-201ENST00000567966 GJA5P36382 358 aa13.5□□□□□ -0.25
LINC01228-201ENST00000567966 AACSQ86V21 672 aa13.5□□□□□ -0.25
LINC01228-201ENST00000567966 ZGPATQ8N5A5 531 aaKnown RBP13.5□□□□□ -0.25
LINC01228-201ENST00000567966 TEPSINQ96N21 525 aa13.5□□□□□ -0.25
LINC01228-201ENST00000567966 MYH13Q9UKX3 1938 aa13.5□□□□□ -0.25
LINC01228-201ENST00000567966 IGHDP01880 384 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
LINC01228-201ENST00000567966 ADORA1P30542 326 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 PHKA1P46020 1223 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 CACNB3P54284 484 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 SUPT20HL1Q3ZLR7 823 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC01228-201ENST00000567966 ZNF296Q8WUU4 475 aaPredicted RBP13.49□□□□□ -0.25
LINC01228-201ENST00000567966 WNK4Q96J92 1243 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 TMEM39BQ9GZU3 492 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 CCDC8Q9H0W5 538 aaPredicted RBP13.49□□□□□ -0.25
LINC01228-201ENST00000567966 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
LINC01228-201ENST00000567966 LAMB1P07942 1786 aa13.49□□□□□ -0.25
LINC01228-201ENST00000567966 SALL1Q9NSC2 1324 aa13.48□□□□□ -0.25
LINC01228-201ENST00000567966 GPR25O00155 361 aa13.48□□□□□ -0.25
LINC01228-201ENST00000567966 APBB1O00213 710 aa13.48□□□□□ -0.25
LINC01228-201ENST00000567966 RGS19P49795 217 aa13.48□□□□□ -0.25
LINC01228-201ENST00000567966 HDLBPQ00341 1268 aaKnown RBP13.48□□□□□ -0.25
LINC01228-201ENST00000567966 TTC39AQ5SRH9 613 aa13.48□□□□□ -0.25
LINC01228-201ENST00000567966 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
LINC01228-201ENST00000567966 SPTY2D1Q68D10 685 aaPredicted RBP13.48□□□□□ -0.25
LINC01228-201ENST00000567966 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
LINC01228-201ENST00000567966 TMED8Q6PL24 325 aaPredicted RBP13.48□□□□□ -0.25
LINC01228-201ENST00000567966 POTEHQ6S545 545 aa13.48□□□□□ -0.25
LINC01228-201ENST00000567966 CTU1Q7Z7A3 348 aaKnown RBP13.48□□□□□ -0.25
LINC01228-201ENST00000567966 ATP5JP18859 108 aa13.47□□□□□ -0.25
LINC01228-201ENST00000567966 NUCB1Q02818 461 aa13.47□□□□□ -0.25
LINC01228-201ENST00000567966 SREBF2Q12772 1141 aa13.47□□□□□ -0.25
LINC01228-201ENST00000567966 SPATA5Q8NB90 893 aa13.47□□□□□ -0.25
LINC01228-201ENST00000567966 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
LINC01228-201ENST00000567966 IGF2BP3O00425 579 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC01228-201ENST00000567966 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
LINC01228-201ENST00000567966 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.25
LINC01228-201ENST00000567966 TNFAIP1Q13829 316 aa13.46□□□□□ -0.25
LINC01228-201ENST00000567966 RASGRF1Q13972 1273 aa13.46□□□□□ -0.25
LINC01228-201ENST00000567966 APOBEC3HQ6NTF7 200 aaKnown RBP13.46□□□□□ -0.25
LINC01228-201ENST00000567966 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.46□□□□□ -0.25
LINC01228-201ENST00000567966 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
LINC01228-201ENST00000567966 ANKRD13AQ8IZ07 590 aa13.46□□□□□ -0.25
LINC01228-201ENST00000567966 TEKT1Q969V4 418 aa13.46□□□□□ -0.25
LINC01228-201ENST00000567966 ELP3Q9H9T3 547 aa13.46□□□□□ -0.25
LINC01228-201ENST00000567966 HMG20BQ9P0W2 317 aa13.46□□□□□ -0.25
LINC01228-201ENST00000567966 MANSC4A6NHS7 340 aaPredicted RBP13.45□□□□□ -0.26
LINC01228-201ENST00000567966 ZBTB48P10074 688 aaPredicted RBP13.45□□□□□ -0.26
LINC01228-201ENST00000567966 SLF2Q8IX21 1173 aa13.45□□□□□ -0.26
LINC01228-201ENST00000567966 ZDHHC15Q96MV8 337 aa13.45□□□□□ -0.26
LINC01228-201ENST00000567966 CFHR5Q9BXR6 569 aa13.45□□□□□ -0.26
LINC01228-201ENST00000567966 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
LINC01228-201ENST00000567966 ECHDC1Q9NTX5 307 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms