RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 RPAP1Q9BWH6 1393 aaPredicted RBP28.69■■■□□ 2.18
CNEP1R1-209ENST00000567712 TLR2O60603 784 aa28.68■■■□□ 2.18
CNEP1R1-209ENST00000567712 PRDX5P30044 214 aa28.68■■■□□ 2.18
CNEP1R1-209ENST00000567712 ZEB1P37275 1124 aaPredicted RBP28.68■■■□□ 2.18
CNEP1R1-209ENST00000567712 TCP10Q12799 353 aa28.68■■■□□ 2.18
CNEP1R1-209ENST00000567712 NFIAQ12857 509 aa28.68■■■□□ 2.18
CNEP1R1-209ENST00000567712 PPIL2Q13356 520 aa28.68■■■□□ 2.18
CNEP1R1-209ENST00000567712 CDC42EP5Q6NZY7 148 aa28.68■■■□□ 2.18
CNEP1R1-209ENST00000567712 SIL1Q9H173 461 aa28.68■■■□□ 2.18
CNEP1R1-209ENST00000567712 CTGFP29279 349 aa28.67■■■□□ 2.18
CNEP1R1-209ENST00000567712 WDR66Q8TBY9 1149 aa28.67■■■□□ 2.18
CNEP1R1-209ENST00000567712 ECM2O94769 699 aaPredicted RBP28.66■■■□□ 2.18
CNEP1R1-209ENST00000567712 SNAPC2Q13487 334 aa28.66■■■□□ 2.18
CNEP1R1-209ENST00000567712 FAM151AQ8WW52 585 aa28.66■■■□□ 2.18
CNEP1R1-209ENST00000567712 ZNF341Q9BYN7 854 aa28.66■■■□□ 2.18
CNEP1R1-209ENST00000567712 MYH2Q9UKX2 1941 aa28.66■■■□□ 2.18
CNEP1R1-209ENST00000567712 MYCP01106 439 aaPredicted RBP28.65■■■□□ 2.18
CNEP1R1-209ENST00000567712 LACTBP83111 547 aaPredicted RBP28.65■■■□□ 2.18
CNEP1R1-209ENST00000567712 ALDH1L2Q3SY69 923 aa28.65■■■□□ 2.18
CNEP1R1-209ENST00000567712 SLC9C1Q4G0N8 1177 aa28.65■■■□□ 2.18
CNEP1R1-209ENST00000567712 ZFPM1Q8IX07 1006 aa28.65■■■□□ 2.18
CNEP1R1-209ENST00000567712 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.65■■■□□ 2.18
CNEP1R1-209ENST00000567712 FAM198AQ9UFP1 575 aa28.65■■■□□ 2.18
CNEP1R1-209ENST00000567712 ZNF112Q9UJU3 913 aa28.65■■■□□ 2.18
CNEP1R1-209ENST00000567712 DCAF15Q66K64 600 aa28.64■■■□□ 2.18
CNEP1R1-209ENST00000567712 SH3TC2Q8TF17 1288 aa28.64■■■□□ 2.18
CNEP1R1-209ENST00000567712 SMC4Q9NTJ3 1288 aa28.64■■■□□ 2.18
CNEP1R1-209ENST00000567712 PPATQ06203 517 aa28.63■■■□□ 2.17
CNEP1R1-209ENST00000567712 MOGSQ13724 837 aa28.63■■■□□ 2.17
CNEP1R1-209ENST00000567712 ZCCHC17Q9NP64 241 aaKnown RBP28.63■■■□□ 2.17
CNEP1R1-209ENST00000567712 PA2G4Q9UQ80 394 aaKnown RBP28.63■■■□□ 2.17
CNEP1R1-209ENST00000567712 PHKA1P46020 1223 aa28.62■■■□□ 2.17
CNEP1R1-209ENST00000567712 ATP2B3Q16720 1220 aa28.62■■■□□ 2.17
CNEP1R1-209ENST00000567712 C17orf99Q6UX52 265 aa28.62■■■□□ 2.17
CNEP1R1-209ENST00000567712 TRMT2AQ8IZ69 625 aaKnown RBP28.62■■■□□ 2.17
CNEP1R1-209ENST00000567712 HOOK2Q96ED9 719 aa28.62■■■□□ 2.17
CNEP1R1-209ENST00000567712 TMEM106CQ9BVX2 250 aa28.62■■■□□ 2.17
CNEP1R1-209ENST00000567712 CPA4Q9UI42 421 aa28.62■■■□□ 2.17
CNEP1R1-209ENST00000567712 ADORA1P30542 326 aa28.61■■■□□ 2.17
CNEP1R1-209ENST00000567712 HABP4Q5JVS0 413 aaKnown RBP28.61■■■□□ 2.17
CNEP1R1-209ENST00000567712 ADGRA2Q96PE1 1338 aa28.61■■■□□ 2.17
CNEP1R1-209ENST00000567712 DOCK2Q92608 1830 aa28.6■■■□□ 2.17
CNEP1R1-209ENST00000567712 CIAO1O76071 339 aa28.6■■■□□ 2.17
CNEP1R1-209ENST00000567712 UBTFL1P0CB47 393 aaPredicted RBP28.6■■■□□ 2.17
CNEP1R1-209ENST00000567712 ARHGEF6Q15052 776 aa28.6■■■□□ 2.17
CNEP1R1-209ENST00000567712 USP40Q9NVE5 1235 aa28.6■■■□□ 2.17
CNEP1R1-209ENST00000567712 NOB1Q9ULX3 412 aaKnown RBP28.6■■■□□ 2.17
CNEP1R1-209ENST00000567712 KCNH4Q9UQ05 1017 aa28.6■■■□□ 2.17
CNEP1R1-209ENST00000567712 LRRFIP2Q9Y608 721 aaKnown RBP28.6■■■□□ 2.17
CNEP1R1-209ENST00000567712 SLURP2P0DP57 97 aa28.59■■■□□ 2.17
CNEP1R1-209ENST00000567712 NBPF11Q86T75 865 aa28.59■■■□□ 2.17
CNEP1R1-209ENST00000567712 CEP126Q9P2H0 1117 aa28.59■■■□□ 2.17
CNEP1R1-209ENST00000567712 CEP290O15078 2479 aa28.58■■■□□ 2.17
CNEP1R1-209ENST00000567712 LDHBP07195 334 aaKnown RBP28.58■■■□□ 2.17
CNEP1R1-209ENST00000567712 SLC4A8Q2Y0W8 1093 aa28.58■■■□□ 2.17
CNEP1R1-209ENST00000567712 ANKRD23Q86SG2 305 aa28.58■■■□□ 2.17
CNEP1R1-209ENST00000567712 GCC1Q96CN9 775 aa28.58■■■□□ 2.17
CNEP1R1-209ENST00000567712 ATRNL1Q5VV63 1379 aa28.58■■■□□ 2.17
CNEP1R1-209ENST00000567712 MGAMO43451 1857 aa28.57■■■□□ 2.16
CNEP1R1-209ENST00000567712 PDHXO00330 501 aa28.57■■■□□ 2.16
CNEP1R1-209ENST00000567712 FBXO3Q9UK99 471 aa28.57■■■□□ 2.16
CNEP1R1-209ENST00000567712 SALL1Q9NSC2 1324 aa28.57■■■□□ 2.16
CNEP1R1-209ENST00000567712 PTPRFP10586 1907 aa28.56■■■□□ 2.16
CNEP1R1-209ENST00000567712 KIF22Q14807 665 aa28.56■■■□□ 2.16
CNEP1R1-209ENST00000567712 NOL9Q5SY16 702 aaKnown RBP28.56■■■□□ 2.16
CNEP1R1-209ENST00000567712 TRIM47Q96LD4 638 aa28.56■■■□□ 2.16
CNEP1R1-209ENST00000567712 WDHD1O75717 1129 aaPredicted RBP28.55■■■□□ 2.16
CNEP1R1-209ENST00000567712 MTFR1Q15390 333 aa28.55■■■□□ 2.16
CNEP1R1-209ENST00000567712 GPAT2Q6NUI2 795 aa28.55■■■□□ 2.16
CNEP1R1-209ENST00000567712 SH3BP5LQ7L8J4 393 aa28.55■■■□□ 2.16
CNEP1R1-209ENST00000567712 MEIS3Q99687 375 aa28.55■■■□□ 2.16
CNEP1R1-209ENST00000567712 DENND2AQ9ULE3 1009 aa28.55■■■□□ 2.16
CNEP1R1-209ENST00000567712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.55■■■□□ 2.16
CNEP1R1-209ENST00000567712 PHIPQ8WWQ0 1821 aa28.55■■■□□ 2.16
CNEP1R1-209ENST00000567712 PHF20L1A8MW92 1017 aa28.54■■■□□ 2.16
CNEP1R1-209ENST00000567712 PSMC4P43686 418 aa28.54■■■□□ 2.16
CNEP1R1-209ENST00000567712 CCDC102BQ68D86 513 aa28.54■■■□□ 2.16
CNEP1R1-209ENST00000567712 GNL3LQ9NVN8 582 aaKnown RBP28.54■■■□□ 2.16
CNEP1R1-209ENST00000567712 RFX7Q2KHR2 1363 aa28.53■■■□□ 2.16
CNEP1R1-209ENST00000567712 IL15P40933 162 aaPredicted RBP28.53■■■□□ 2.16
CNEP1R1-209ENST00000567712 RGS3P49796 1198 aa28.53■■■□□ 2.16
CNEP1R1-209ENST00000567712 COPRSQ9NQ92 184 aa28.53■■■□□ 2.16
CNEP1R1-209ENST00000567712 GAKO14976 1311 aa28.52■■■□□ 2.16
CNEP1R1-209ENST00000567712 GNRH1P01148 92 aa28.52■■■□□ 2.16
CNEP1R1-209ENST00000567712 OSBPP22059 807 aa28.52■■■□□ 2.16
CNEP1R1-209ENST00000567712 TIMM10P62072 90 aa28.52■■■□□ 2.16
CNEP1R1-209ENST00000567712 RASGRF1Q13972 1273 aa28.52■■■□□ 2.16
CNEP1R1-209ENST00000567712 SHISA4Q96DD7 197 aa28.52■■■□□ 2.16
CNEP1R1-209ENST00000567712 SRRDQ9UH36 339 aa28.52■■■□□ 2.16
CNEP1R1-209ENST00000567712 SEMA3EO15041 775 aa28.51■■■□□ 2.15
CNEP1R1-209ENST00000567712 CYP2C8P10632 490 aa28.51■■■□□ 2.15
CNEP1R1-209ENST00000567712 IDI2Q9BXS1 227 aa28.51■■■□□ 2.15
CNEP1R1-209ENST00000567712 DDX4Q9NQI0 724 aaKnown RBP28.51■■■□□ 2.15
CNEP1R1-209ENST00000567712 DOCK3Q8IZD9 2030 aa28.51■■■□□ 2.15
CNEP1R1-209ENST00000567712 DOCK1Q14185 1865 aa28.49■■■□□ 2.15
CNEP1R1-209ENST00000567712 DDTLA6NHG4 134 aaPredicted RBP28.49■■■□□ 2.15
CNEP1R1-209ENST00000567712 ZBTB22O15209 634 aa28.49■■■□□ 2.15
CNEP1R1-209ENST00000567712 BCRP11274 1271 aa28.49■■■□□ 2.15
CNEP1R1-209ENST00000567712 ZNF384Q8TF68 577 aa28.49■■■□□ 2.15
CNEP1R1-209ENST00000567712 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms