RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 USP40Q9NVE5 1235 aa13.5□□□□□ -0.25
CNOT1-210ENST00000567133 TLR7Q9NYK1 1049 aaKnown RBP13.5□□□□□ -0.25
CNOT1-210ENST00000567133 CASP8AP2Q9UKL3 1982 aa13.5□□□□□ -0.25
CNOT1-210ENST00000567133 USP2O75604 605 aaPredicted RBP13.49□□□□□ -0.25
CNOT1-210ENST00000567133 UQCRFS1P1P0C7P4 283 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 MCAMP43121 646 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 LDLRAD1Q5T700 205 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 SPTY2D1Q68D10 685 aaPredicted RBP13.49□□□□□ -0.25
CNOT1-210ENST00000567133 TEPSINQ96N21 525 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 ELP3Q9H9T3 547 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 RNF186Q9NXI6 227 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 RAI14Q9P0K7 980 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 NOP58Q9Y2X3 529 aaKnown RBP13.49□□□□□ -0.25
CNOT1-210ENST00000567133 OTOFQ9HC10 1997 aa13.49□□□□□ -0.25
CNOT1-210ENST00000567133 CA12O43570 354 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 ARID4AP29374 1257 aaPredicted RBP13.48□□□□□ -0.25
CNOT1-210ENST00000567133 MECOMQ03112 1051 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 NFIAQ12857 509 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 SPRYD7Q5W111 196 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 MIGA2Q7L4E1 593 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 AACSQ86V21 672 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 MRIQ9BWK5 157 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 LRP2BPQ9P2M1 347 aa13.48□□□□□ -0.25
CNOT1-210ENST00000567133 HMMRO75330 724 aa13.47□□□□□ -0.25
CNOT1-210ENST00000567133 BTDP43251 543 aa13.47□□□□□ -0.25
CNOT1-210ENST00000567133 PICALMQ13492 652 aa13.47□□□□□ -0.25
CNOT1-210ENST00000567133 EAF2Q96CJ1 260 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-210ENST00000567133 DBNLQ9UJU6 430 aaKnown RBP13.47□□□□□ -0.25
CNOT1-210ENST00000567133 PDS5AQ29RF7 1337 aaKnown RBP13.46□□□□□ -0.25
CNOT1-210ENST00000567133 TBC1D8O95759 1140 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 MAP3K11Q16584 847 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 FAM83AQ86UY5 434 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 ERC1Q8IUD2 1116 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 ZSCAN29Q8IWY8 852 aaPredicted RBP13.46□□□□□ -0.25
CNOT1-210ENST00000567133 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 SLF2Q8IX21 1173 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 ANKRD13AQ8IZ07 590 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 WRNIP1Q96S55 665 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.25
CNOT1-210ENST00000567133 GPR108Q9NPR9 543 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 CSADQ9Y600 493 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
CNOT1-210ENST00000567133 MROH7-TTC4A0A0A0MT08 1334 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 MYO5AQ9Y4I1 1855 aaKnown RBP13.45□□□□□ -0.26
CNOT1-210ENST00000567133 GJA5P36382 358 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 ZAP70P43403 619 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 RGS3P49796 1198 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 GSTO1P78417 241 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 MAP3K9P80192 1104 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 SREBF2Q12772 1141 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 VGLL4Q14135 290 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 PDE3AQ14432 1141 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 SIRT2Q8IXJ6 389 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 RPAP2Q8IXW5 612 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-210ENST00000567133 OPTNQ96CV9 577 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 FAM198AQ9UFP1 575 aa13.45□□□□□ -0.26
CNOT1-210ENST00000567133 GAKO14976 1311 aa13.44□□□□□ -0.26
CNOT1-210ENST00000567133 HSP90AB4PQ58FF6 505 aa13.44□□□□□ -0.26
CNOT1-210ENST00000567133 FKBP1CQ5VVH2 108 aa13.44□□□□□ -0.26
CNOT1-210ENST00000567133 DCAF15Q66K64 600 aa13.44□□□□□ -0.26
CNOT1-210ENST00000567133 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-210ENST00000567133 RHPN1Q8TCX5 695 aa13.44□□□□□ -0.26
CNOT1-210ENST00000567133 ZNF384Q8TF68 577 aa13.44□□□□□ -0.26
CNOT1-210ENST00000567133 FAM151AQ8WW52 585 aa13.44□□□□□ -0.26
CNOT1-210ENST00000567133 ZKSCAN4Q969J2 545 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-210ENST00000567133 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
CNOT1-210ENST00000567133 PIH1D3Q9NQM4 214 aaKnown RBP13.44□□□□□ -0.26
CNOT1-210ENST00000567133 CYP2E1P05181 493 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-210ENST00000567133 LDHCP07864 332 aa13.43□□□□□ -0.26
CNOT1-210ENST00000567133 NAA16Q6N069 864 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-210ENST00000567133 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-210ENST00000567133 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.43□□□□□ -0.26
CNOT1-210ENST00000567133 NSUN4Q96CB9 384 aaKnown RBP13.43□□□□□ -0.26
CNOT1-210ENST00000567133 HOOK2Q96ED9 719 aa13.43□□□□□ -0.26
CNOT1-210ENST00000567133 NOL10Q9BSC4 688 aaKnown RBP13.43□□□□□ -0.26
CNOT1-210ENST00000567133 ZNF341Q9BYN7 854 aa13.43□□□□□ -0.26
CNOT1-210ENST00000567133 DDX4Q9NQI0 724 aaKnown RBP13.43□□□□□ -0.26
CNOT1-210ENST00000567133 SAGE1Q9NXZ1 904 aa13.43□□□□□ -0.26
CNOT1-210ENST00000567133 MANSC4A6NHS7 340 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-210ENST00000567133 IDH1O75874 414 aaKnown RBP13.42□□□□□ -0.26
CNOT1-210ENST00000567133 IFIT2P09913 472 aaKnown RBP13.42□□□□□ -0.26
CNOT1-210ENST00000567133 SLURP2P0DP57 97 aa13.42□□□□□ -0.26
CNOT1-210ENST00000567133 ZBTB48P10074 688 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-210ENST00000567133 INPP5BP32019 993 aa13.42□□□□□ -0.26
CNOT1-210ENST00000567133 TM4SF4P48230 202 aa13.42□□□□□ -0.26
CNOT1-210ENST00000567133 DGKZQ13574 1117 aa13.42□□□□□ -0.26
CNOT1-210ENST00000567133 CLASRPQ8N2M8 674 aaKnown RBP13.42□□□□□ -0.26
CNOT1-210ENST00000567133 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
CNOT1-210ENST00000567133 AATFQ9NY61 560 aaKnown RBP eCLIP13.42□□□□□ -0.26
CNOT1-210ENST00000567133 DOCK2Q92608 1830 aa13.41□□□□□ -0.26
CNOT1-210ENST00000567133 MAST2Q6P0Q8 1798 aa13.41□□□□□ -0.26
CNOT1-210ENST00000567133 GPR75-ASB3A0A0A6YYF3 556 aa13.41□□□□□ -0.26
CNOT1-210ENST00000567133 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
CNOT1-210ENST00000567133 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
CNOT1-210ENST00000567133 TEX11Q8IYF3 940 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms