RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 PNMA6EA0A0J9YXQ4 647 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 RLBP1P12271 317 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 TNFAIP1Q13829 316 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 RASA3Q14644 834 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 GORABQ5T7V8 394 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 EFCAB3Q8N7B9 438 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 BCL11AQ9H165 835 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 PRDM10Q9NQV6 1147 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 SERPINA10Q9UK55 444 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 MAST3O60307 1309 aa12.52□□□□□ -0.41
GTF3C1-206ENST00000566779 TRPA1O75762 1119 aa12.51□□□□□ -0.41
GTF3C1-206ENST00000566779 G3BP1Q13283 466 aaKnown RBP eCLIP12.51□□□□□ -0.414e-6■■□□□ 12.2
GTF3C1-206ENST00000566779 NBPF12Q5TAG4 269 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-206ENST00000566779 MTMR14Q8NCE2 650 aa12.51□□□□□ -0.41
GTF3C1-206ENST00000566779 FBXO22Q8NEZ5 403 aa12.51□□□□□ -0.41
GTF3C1-206ENST00000566779 PANK1Q8TE04 598 aa12.51□□□□□ -0.41
GTF3C1-206ENST00000566779 TMEM39BQ9GZU3 492 aa12.51□□□□□ -0.41
GTF3C1-206ENST00000566779 A0A1B0GUL7 405 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 PPP1R12BO60237 982 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 PPP1R37O75864 691 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 TNNI2P48788 182 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 TIMM10P62072 90 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 DIXDC1Q155Q3 683 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 CDAN1Q8IWY9 1227 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 WDR66Q8TBY9 1149 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 CLMNQ96JQ2 1002 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 ABCF2Q9UG63 623 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 PPP2R3BQ9Y5P8 575 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 MAST2Q6P0Q8 1798 aa12.5□□□□□ -0.41
GTF3C1-206ENST00000566779 CA12O43570 354 aa12.49□□□□□ -0.41
GTF3C1-206ENST00000566779 LDHBP07195 334 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-206ENST00000566779 PRDX5P30044 214 aa12.49□□□□□ -0.41
GTF3C1-206ENST00000566779 CCDC102BQ68D86 513 aa12.49□□□□□ -0.41
GTF3C1-206ENST00000566779 DZIP1Q86YF9 867 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-206ENST00000566779 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
GTF3C1-206ENST00000566779 AKAP2Q9Y2D5 859 aa12.49□□□□□ -0.41
GTF3C1-206ENST00000566779 IREB2P48200 963 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-206ENST00000566779 MTX1Q13505 466 aa12.48□□□□□ -0.41
GTF3C1-206ENST00000566779 RASGRF1Q13972 1273 aa12.48□□□□□ -0.41
GTF3C1-206ENST00000566779 SLC10A4Q96EP9 437 aa12.48□□□□□ -0.41
GTF3C1-206ENST00000566779 CSRNP1Q96S65 589 aa12.48□□□□□ -0.41
GTF3C1-206ENST00000566779 RNF186Q9NXI6 227 aa12.48□□□□□ -0.41
GTF3C1-206ENST00000566779 DENND2AQ9ULE3 1009 aa12.48□□□□□ -0.41
GTF3C1-206ENST00000566779 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-206ENST00000566779 LAMB1P07942 1786 aa12.48□□□□□ -0.41
GTF3C1-206ENST00000566779 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
GTF3C1-206ENST00000566779 SURF6O75683 361 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-206ENST00000566779 TCP10Q12799 353 aa12.47□□□□□ -0.41
GTF3C1-206ENST00000566779 MVPQ14764 893 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-206ENST00000566779 PI16Q6UXB8 463 aa12.47□□□□□ -0.41
GTF3C1-206ENST00000566779 ZDHHC15Q96MV8 337 aa12.47□□□□□ -0.41
GTF3C1-206ENST00000566779 ELP3Q9H9T3 547 aa12.47□□□□□ -0.41
GTF3C1-206ENST00000566779 DAGLAQ9Y4D2 1042 aa12.47□□□□□ -0.41
GTF3C1-206ENST00000566779 APBB1O00213 710 aa12.46□□□□□ -0.41
GTF3C1-206ENST00000566779 HDLBPQ00341 1268 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-206ENST00000566779 YTHDC1Q96MU7 727 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-206ENST00000566779 SEMA3EO15041 775 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 TBC1D8O95759 1140 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 DGKZQ13574 1117 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 TTC39AQ5SRH9 613 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 SPRYD7Q5W111 196 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 APOBEC3HQ6NTF7 200 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 ZGPATQ8N5A5 531 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 WNK4Q96J92 1243 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 RAI14Q9P0K7 980 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 RCAN3Q9UKA8 241 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 SUGT1Q9Y2Z0 365 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 ATAD5Q96QE3 1844 aa12.45□□□□□ -0.42
GTF3C1-206ENST00000566779 CCDC85CA6NKD9 419 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 USP2O75604 605 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 ATP8B2P98198 1209 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 LDLRAD1Q5T700 205 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 CDC42EP5Q6NZY7 148 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 HHIPL2Q6UWX4 724 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 TBC1D9Q6ZT07 1266 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 ANKRD13AQ8IZ07 590 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 OTUD5Q96G74 571 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 ABHD8Q96I13 439 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 TEPSINQ96N21 525 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 USP40Q9NVE5 1235 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 SAGE1Q9NXZ1 904 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 EXOC6BQ9Y2D4 811 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 CSADQ9Y600 493 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 DOCK1Q14185 1865 aa12.44□□□□□ -0.42
GTF3C1-206ENST00000566779 NFIAQ12857 509 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 PICALMQ13492 652 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 TNNI3KQ59H18 835 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 ERICH6Q7L0X2 663 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 ZSCAN29Q8IWY8 852 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 SPATA5Q8NB90 893 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 SSH3Q8TE77 659 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 OPTNQ96CV9 577 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms