RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 IGDCC4Q8TDY8 1250 aa21.82■■□□□ 1.08
MSLN-207ENST00000566549 ERCC4Q92889 916 aaPredicted RBP21.82■■□□□ 1.08
MSLN-207ENST00000566549 LY9Q9HBG7 655 aa21.82■■□□□ 1.08
MSLN-207ENST00000566549 RTL9Q8NET4 1388 aa21.82■■□□□ 1.08
MSLN-207ENST00000566549 SNW1Q13573 536 aaKnown RBP21.82■■□□□ 1.08
MSLN-207ENST00000566549 KLHL34Q8N239 644 aa21.82■■□□□ 1.08
MSLN-207ENST00000566549 SRP68Q9UHB9 627 aaKnown RBP21.82■■□□□ 1.08
MSLN-207ENST00000566549 IFIT3O14879 490 aaKnown RBP21.81■■□□□ 1.08
MSLN-207ENST00000566549 ZBTB43O43298 467 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 TOM1O60784 492 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 STK38Q15208 465 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 SF3A1Q15459 793 aaKnown RBP21.81■■□□□ 1.08
MSLN-207ENST00000566549 ALX1Q15699 326 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 ATL3Q6DD88 541 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 CLEC4GQ6UXB4 293 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 ALG1Q9BT22 464 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 RAI14Q9P0K7 980 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 UBE2Q2LH0YL09 131 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 CYP7A1P22680 504 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 CELF1Q92879 486 aaKnown RBP21.81■■□□□ 1.08
MSLN-207ENST00000566549 ARAP2Q8WZ64 1704 aa21.81■■□□□ 1.08
MSLN-207ENST00000566549 GOLGA8AA7E2F4 631 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 KINO60870 393 aaKnown RBP21.8■■□□□ 1.08
MSLN-207ENST00000566549 MYSM1Q5VVJ2 828 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 MFSD6Q6ZSS7 791 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 SDR42E1Q8WUS8 393 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 TMEM87BQ96K49 555 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 RTEL1Q9NZ71 1219 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 A0A1B0GVL5 298 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 ZNF165P49910 485 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 KIF23Q02241 960 aaPredicted RBP21.8■■□□□ 1.08
MSLN-207ENST00000566549 AKNAD1Q5T1N1 836 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.8■■□□□ 1.08
MSLN-207ENST00000566549 LINC00301Q8NCQ3 95 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 FBXW7Q969H0 707 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 NACAP1Q9BZK3 213 aa21.8■■□□□ 1.08
MSLN-207ENST00000566549 VPS37DQ86XT2 251 aa21.79■■□□□ 1.08
MSLN-207ENST00000566549 C17orf53Q8N3J3 647 aaPredicted RBP21.79■■□□□ 1.08
MSLN-207ENST00000566549 RREB1Q92766 1687 aa21.79■■□□□ 1.08
MSLN-207ENST00000566549 FAM160A1Q05DH4 1040 aa21.79■■□□□ 1.08
MSLN-207ENST00000566549 KIAA2012Q0VF49 1180 aa21.79■■□□□ 1.08
MSLN-207ENST00000566549 BCL2L12Q9HB09 334 aa21.79■■□□□ 1.08
MSLN-207ENST00000566549 R3HCC1Q9Y3T6 440 aaKnown RBP21.79■■□□□ 1.08
MSLN-207ENST00000566549 SLC12A7Q9Y666 1083 aa21.79■■□□□ 1.08
MSLN-207ENST00000566549 CCDC69A6NI79 296 aa21.78■■□□□ 1.08
MSLN-207ENST00000566549 SMIM22K7EJ46 135 aa21.78■■□□□ 1.08
MSLN-207ENST00000566549 SYNE3Q6ZMZ3 975 aa21.78■■□□□ 1.08
MSLN-207ENST00000566549 MINPP1Q9UNW1 487 aa21.78■■□□□ 1.08
MSLN-207ENST00000566549 BCL9LQ86UU0 1499 aa21.78■■□□□ 1.08
MSLN-207ENST00000566549 RANBP6O60518 1105 aaKnown RBP21.78■■□□□ 1.08
MSLN-207ENST00000566549 ENGASEQ8NFI3 743 aa21.78■■□□□ 1.08
MSLN-207ENST00000566549 MRPS27Q92552 414 aaKnown RBP21.78■■□□□ 1.08
MSLN-207ENST00000566549 MINDY4BA8MYZ0 360 aa21.77■■□□□ 1.08
MSLN-207ENST00000566549 GNPATO15228 680 aa21.77■■□□□ 1.08
MSLN-207ENST00000566549 CDKL5O76039 1030 aa21.77■■□□□ 1.08
MSLN-207ENST00000566549 KLRK1P26718 216 aa21.77■■□□□ 1.08
MSLN-207ENST00000566549 CPLX2Q6PUV4 134 aaKnown RBP21.77■■□□□ 1.08
MSLN-207ENST00000566549 C11orf57Q6ZUT1 292 aaPredicted RBP21.77■■□□□ 1.08
MSLN-207ENST00000566549 BRAPQ7Z569 592 aa21.77■■□□□ 1.08
MSLN-207ENST00000566549 FAM217BQ9NTX9 383 aaPredicted RBP21.77■■□□□ 1.08
MSLN-207ENST00000566549 BSDC1Q9NW68 430 aaPredicted RBP21.77■■□□□ 1.08
MSLN-207ENST00000566549 GNAT2P19087 354 aa21.77■■□□□ 1.08
MSLN-207ENST00000566549 GNL2Q13823 731 aaKnown RBP21.77■■□□□ 1.08
MSLN-207ENST00000566549 SF3B3Q15393 1217 aaKnown RBP21.77■■□□□ 1.08
MSLN-207ENST00000566549 KRT40Q6A162 431 aa21.77■■□□□ 1.08
MSLN-207ENST00000566549 CCDC82Q8N4S0 544 aa21.77■■□□□ 1.08
MSLN-207ENST00000566549 PNPLA7Q6ZV29 1317 aa21.77■■□□□ 1.07
MSLN-207ENST00000566549 SPTLC2O15270 562 aa21.76■■□□□ 1.07
MSLN-207ENST00000566549 IARSP41252 1262 aaKnown RBP21.76■■□□□ 1.07
MSLN-207ENST00000566549 NDUFA8P51970 172 aa21.76■■□□□ 1.07
MSLN-207ENST00000566549 SLC26A6Q9BXS9 759 aa21.76■■□□□ 1.07
MSLN-207ENST00000566549 CNNM2Q9H8M5 875 aa21.76■■□□□ 1.07
MSLN-207ENST00000566549 COL1A1P02452 1464 aaPredicted RBP21.76■■□□□ 1.07
MSLN-207ENST00000566549 VPS72Q15906 364 aa21.76■■□□□ 1.07
MSLN-207ENST00000566549 CAVIN4Q5BKX8 364 aa21.76■■□□□ 1.07
MSLN-207ENST00000566549 SGMS1Q86VZ5 419 aa21.76■■□□□ 1.07
MSLN-207ENST00000566549 KRT23Q9C075 422 aa21.76■■□□□ 1.07
MSLN-207ENST00000566549 GNL3LQ9NVN8 582 aaKnown RBP21.76■■□□□ 1.07
MSLN-207ENST00000566549 POLR3EQ9NVU0 708 aa21.76■■□□□ 1.07
MSLN-207ENST00000566549 UBAP1LF5GYI3 381 aa21.75■■□□□ 1.07
MSLN-207ENST00000566549 NTRK3Q16288 839 aa21.75■■□□□ 1.07
MSLN-207ENST00000566549 ADALQ6DHV7 355 aa21.75■■□□□ 1.07
MSLN-207ENST00000566549 CMTR1Q8N1G2 835 aaKnown RBP21.75■■□□□ 1.07
MSLN-207ENST00000566549 KCNG4Q8TDN1 519 aa21.75■■□□□ 1.07
MSLN-207ENST00000566549 MYH15Q9Y2K3 1946 aa21.75■■□□□ 1.07
MSLN-207ENST00000566549 ZNF804BA4D1E1 1349 aa21.75■■□□□ 1.07
MSLN-207ENST00000566549 MARCKSP29966 332 aaPredicted RBP21.75■■□□□ 1.07
MSLN-207ENST00000566549 LIFRP42702 1097 aa21.75■■□□□ 1.07
MSLN-207ENST00000566549 AMIGO3Q86WK7 504 aa21.75■■□□□ 1.07
MSLN-207ENST00000566549 NBPF5PQ86XG9 351 aaPredicted RBP21.75■■□□□ 1.07
MSLN-207ENST00000566549 STAG1Q8WVM7 1258 aa21.75■■□□□ 1.07
MSLN-207ENST00000566549 TAF1P21675 1872 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 MAGEB6P1A0A0J9YX57 407 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 DYNLL1P63167 89 aaKnown RBP21.74■■□□□ 1.07
MSLN-207ENST00000566549 PPARAQ07869 468 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 UBE4AQ14139 1066 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 ANO1Q5XXA6 986 aa21.74■■□□□ 1.07
MSLN-207ENST00000566549 FMR1NBQ8N0W7 255 aaPredicted RBP21.74■■□□□ 1.07
MSLN-207ENST00000566549 FAM84BQ96KN1 310 aaPredicted RBP21.74■■□□□ 1.07
MSLN-207ENST00000566549 SETDB2Q96T68 719 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms