RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 PRPF38BQ5VTL8 546 aaKnown RBP20.01■□□□□ 0.79
RAB40C-210ENST00000566290 LIMCH1Q9UPQ0 1083 aa20.01■□□□□ 0.79
RAB40C-210ENST00000566290 ZMYM6O95789 1325 aa20.01■□□□□ 0.79
RAB40C-210ENST00000566290 DDX11L8A8MPP1 907 aa20■□□□□ 0.79
RAB40C-210ENST00000566290 HMGB1P09429 215 aaKnown RBP20■□□□□ 0.79
RAB40C-210ENST00000566290 KCNJ4P48050 445 aa20■□□□□ 0.79
RAB40C-210ENST00000566290 EIF6P56537 245 aaKnown RBP20■□□□□ 0.79
RAB40C-210ENST00000566290 NIM1KQ8IY84 436 aa20■□□□□ 0.79
RAB40C-210ENST00000566290 SUPT20HQ8NEM7 779 aa20■□□□□ 0.79
RAB40C-210ENST00000566290 TBC1D16Q8TBP0 767 aa20■□□□□ 0.79
RAB40C-210ENST00000566290 GBP4Q96PP9 640 aa20■□□□□ 0.79
RAB40C-210ENST00000566290 ZIC5Q96T25 663 aa20■□□□□ 0.79
RAB40C-210ENST00000566290 UPF3BQ9BZI7 483 aaKnown RBP20■□□□□ 0.79
RAB40C-210ENST00000566290 LAMA4Q16363 1823 aa19.99■□□□□ 0.79
RAB40C-210ENST00000566290 RIMBP2O15034 1052 aa19.99■□□□□ 0.79
RAB40C-210ENST00000566290 FRAT2O75474 233 aaPredicted RBP19.99■□□□□ 0.79
RAB40C-210ENST00000566290 CELF2O95319 508 aaKnown RBP19.99■□□□□ 0.79
RAB40C-210ENST00000566290 ZAP70P43403 619 aa19.99■□□□□ 0.79
RAB40C-210ENST00000566290 CHRNDQ07001 517 aa19.99■□□□□ 0.79
RAB40C-210ENST00000566290 SCARF1Q14162 830 aa19.99■□□□□ 0.79
RAB40C-210ENST00000566290 USP50Q70EL3 339 aaPredicted RBP19.99■□□□□ 0.79
RAB40C-210ENST00000566290 JAKMIP1Q96N16 626 aaKnown RBP19.99■□□□□ 0.79
RAB40C-210ENST00000566290 YDJCA8MPS7 323 aa19.98■□□□□ 0.79
RAB40C-210ENST00000566290 C6orf229H3BNL8 230 aa19.98■□□□□ 0.79
RAB40C-210ENST00000566290 SEMA3EO15041 775 aa19.98■□□□□ 0.79
RAB40C-210ENST00000566290 CASTP20810 708 aaKnown RBP19.98■□□□□ 0.79
RAB40C-210ENST00000566290 MCM4P33991 863 aa19.98■□□□□ 0.79
RAB40C-210ENST00000566290 ADD2P35612 726 aa19.98■□□□□ 0.79
RAB40C-210ENST00000566290 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
RAB40C-210ENST00000566290 PODXL2Q9NZ53 605 aa19.98■□□□□ 0.79
RAB40C-210ENST00000566290 PHKA1P46020 1223 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 AK2P54819 239 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 CXCL9Q07325 125 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 WASHC4Q2M389 1173 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 BLOC1S2Q6QNY1 142 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 FBXL16Q8N461 479 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 ANKRD2Q9GZV1 360 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 CTNNA3Q9UI47 895 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 ZNRF3Q9ULT6 936 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 MINPP1Q9UNW1 487 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
RAB40C-210ENST00000566290 MAST2Q6P0Q8 1798 aa19.96■□□□□ 0.79
RAB40C-210ENST00000566290 UFL1O94874 794 aa19.96■□□□□ 0.79
RAB40C-210ENST00000566290 RPS6KB1P23443 525 aa19.96■□□□□ 0.79
RAB40C-210ENST00000566290 DOK7Q18PE1 504 aa19.96■□□□□ 0.79
RAB40C-210ENST00000566290 ADCK5Q3MIX3 580 aa19.96■□□□□ 0.79
RAB40C-210ENST00000566290 TNPO1Q92973 898 aaKnown RBP19.96■□□□□ 0.79
RAB40C-210ENST00000566290 DBNDD1Q9H9R9 158 aa19.96■□□□□ 0.79
RAB40C-210ENST00000566290 KCNQ5Q9NR82 932 aa19.96■□□□□ 0.79
RAB40C-210ENST00000566290 PDRG1Q9NUG6 133 aa19.96■□□□□ 0.79
RAB40C-210ENST00000566290 ANKIB1Q9P2G1 1089 aa19.96■□□□□ 0.79
RAB40C-210ENST00000566290 HSPD1P10809 573 aaKnown RBP19.95■□□□□ 0.78
RAB40C-210ENST00000566290 SPATA5Q8NB90 893 aa19.95■□□□□ 0.78
RAB40C-210ENST00000566290 SPRYD3Q8NCJ5 442 aa19.95■□□□□ 0.78
RAB40C-210ENST00000566290 HHIPL1Q96JK4 782 aa19.95■□□□□ 0.78
RAB40C-210ENST00000566290 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.95■□□□□ 0.78
RAB40C-210ENST00000566290 RAD17O75943 681 aa19.94■□□□□ 0.78
RAB40C-210ENST00000566290 CYP21A2P08686 494 aa19.94■□□□□ 0.78
RAB40C-210ENST00000566290 OSBP2Q969R2 916 aa19.94■□□□□ 0.78
RAB40C-210ENST00000566290 SEC62Q99442 399 aaKnown RBP19.94■□□□□ 0.78
RAB40C-210ENST00000566290 AGXT2Q9BYV1 514 aa19.94■□□□□ 0.78
RAB40C-210ENST00000566290 GLIS2Q9BZE0 524 aaPredicted RBP19.94■□□□□ 0.78
RAB40C-210ENST00000566290 GGA1Q9UJY5 639 aa19.94■□□□□ 0.78
RAB40C-210ENST00000566290 XDHP47989 1333 aa19.94■□□□□ 0.78
RAB40C-210ENST00000566290 WDR19Q8NEZ3 1342 aa19.94■□□□□ 0.78
RAB40C-210ENST00000566290 TCRBV5S4A2TA0A5A2 114 aa19.93■□□□□ 0.78
RAB40C-210ENST00000566290 RASGRF1Q13972 1273 aa19.93■□□□□ 0.78
RAB40C-210ENST00000566290 NEK1Q96PY6 1258 aa19.93■□□□□ 0.78
RAB40C-210ENST00000566290 GNL3LQ9NVN8 582 aaKnown RBP19.93■□□□□ 0.78
RAB40C-210ENST00000566290 M0R2C6 588 aa19.92■□□□□ 0.78
RAB40C-210ENST00000566290 ALX1Q15699 326 aa19.92■□□□□ 0.78
RAB40C-210ENST00000566290 C15orf52Q6ZUT6 534 aaKnown RBP19.92■□□□□ 0.78
RAB40C-210ENST00000566290 ZGPATQ8N5A5 531 aaKnown RBP19.92■□□□□ 0.78
RAB40C-210ENST00000566290 ZNF408Q9H9D4 720 aa19.92■□□□□ 0.78
RAB40C-210ENST00000566290 SNAP23O00161 211 aa19.91■□□□□ 0.78
RAB40C-210ENST00000566290 ECE2O60344 883 aa19.91■□□□□ 0.78
RAB40C-210ENST00000566290 BRD1O95696 1058 aa19.91■□□□□ 0.78
RAB40C-210ENST00000566290 PDE6AP16499 860 aa19.91■□□□□ 0.78
RAB40C-210ENST00000566290 MAP3K12Q12852 859 aa19.91■□□□□ 0.78
RAB40C-210ENST00000566290 CCDC129Q6ZRS4 1044 aa19.91■□□□□ 0.78
RAB40C-210ENST00000566290 CHMP4CQ96CF2 233 aa19.91■□□□□ 0.78
RAB40C-210ENST00000566290 EYA3Q99504 573 aa19.91■□□□□ 0.78
RAB40C-210ENST00000566290 PIH1D3Q9NQM4 214 aaKnown RBP19.91■□□□□ 0.78
RAB40C-210ENST00000566290 ADARB2Q9NS39 739 aaKnown RBP19.91■□□□□ 0.78
RAB40C-210ENST00000566290 SHTN1A0MZ66 631 aa19.9■□□□□ 0.78
RAB40C-210ENST00000566290 FOXP2O15409 715 aa19.9■□□□□ 0.78
RAB40C-210ENST00000566290 ATP2B4P23634 1241 aa19.9■□□□□ 0.78
RAB40C-210ENST00000566290 KLRK1P26718 216 aa19.9■□□□□ 0.78
RAB40C-210ENST00000566290 GMPSP49915 693 aaPredicted RBP19.9■□□□□ 0.78
RAB40C-210ENST00000566290 TXNRD3Q86VQ6 643 aa19.9■□□□□ 0.78
RAB40C-210ENST00000566290 HELBQ8NG08 1087 aaPredicted RBP19.9■□□□□ 0.78
RAB40C-210ENST00000566290 ZC3H12CQ9C0D7 883 aaKnown RBP19.9■□□□□ 0.78
RAB40C-210ENST00000566290 GPRC5DQ9NZD1 345 aa19.9■□□□□ 0.78
RAB40C-210ENST00000566290 MYH13Q9UKX3 1938 aa19.9■□□□□ 0.78
RAB40C-210ENST00000566290 SCN9AQ15858 1988 aa19.9■□□□□ 0.78
RAB40C-210ENST00000566290 GOLGA6L22H0YM25 854 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 PSMD14O00487 310 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 GPAA1O43292 621 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 NOGQ13253 232 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 SKOR2Q2VWA4 1001 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms