RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 AP4E1Q9UPM8 1137 aa6.82□□□□□ -1.32
PALB2-204ENST00000566069 DAGLAQ9Y4D2 1042 aa6.82□□□□□ -1.32
PALB2-204ENST00000566069 KRTAP9-7A8MTY7 169 aa6.81□□□□□ -1.32
PALB2-204ENST00000566069 RNASE1P07998 156 aaKnown RBP6.81□□□□□ -1.32
PALB2-204ENST00000566069 AAMPQ13685 434 aa6.81□□□□□ -1.32
PALB2-204ENST00000566069 ATG4DQ86TL0 474 aaPredicted RBP6.81□□□□□ -1.32
PALB2-204ENST00000566069 STK11IPQ8N1F8 1099 aa6.81□□□□□ -1.32
PALB2-204ENST00000566069 PLD6Q8N2A8 252 aaKnown RBP6.81□□□□□ -1.32
PALB2-204ENST00000566069 WDR18Q9BV38 432 aa6.81□□□□□ -1.32
PALB2-204ENST00000566069 LIN7BQ9HAP6 207 aa6.81□□□□□ -1.32
PALB2-204ENST00000566069 BIN1O00499 593 aa6.8□□□□□ -1.32
PALB2-204ENST00000566069 B3GALT4O96024 378 aa6.8□□□□□ -1.32
PALB2-204ENST00000566069 FUT4P22083 530 aa6.8□□□□□ -1.32
PALB2-204ENST00000566069 CD96P40200 585 aa6.8□□□□□ -1.32
PALB2-204ENST00000566069 SYNGAP1Q96PV0 1343 aa6.79□□□□□ -1.32
PALB2-204ENST00000566069 TMEM88BA6NKF7 163 aa6.79□□□□□ -1.32
PALB2-204ENST00000566069 FARP2O94887 1054 aaPredicted RBP6.79□□□□□ -1.32
PALB2-204ENST00000566069 FAM13AO94988 1023 aa6.79□□□□□ -1.32
PALB2-204ENST00000566069 USPL1Q5W0Q7 1092 aa6.79□□□□□ -1.32
PALB2-204ENST00000566069 FAM181AQ8N9Y4 354 aa6.79□□□□□ -1.32
PALB2-204ENST00000566069 NETO1Q8TDF5 533 aa6.79□□□□□ -1.32
PALB2-204ENST00000566069 MISP3Q96FF7 219 aa6.79□□□□□ -1.32
PALB2-204ENST00000566069 WDR89Q96FK6 387 aaPredicted RBP6.79□□□□□ -1.32
PALB2-204ENST00000566069 CORO1BQ9BR76 489 aa6.79□□□□□ -1.32
PALB2-204ENST00000566069 CDK5R2Q13319 367 aa6.78□□□□□ -1.32
PALB2-204ENST00000566069 CYP27C1Q4G0S4 372 aa6.78□□□□□ -1.32
PALB2-204ENST00000566069 HP1BP3Q5SSJ5 553 aaPredicted RBP6.78□□□□□ -1.32
PALB2-204ENST00000566069 KIAA0319Q5VV43 1072 aa6.78□□□□□ -1.32
PALB2-204ENST00000566069 PHLDB3Q6NSJ2 640 aa6.78□□□□□ -1.32
PALB2-204ENST00000566069 FAM168AQ92567 244 aa6.78□□□□□ -1.32
PALB2-204ENST00000566069 KRTAP4-11Q9BYQ6 195 aa6.78□□□□□ -1.32
PALB2-204ENST00000566069 ZNF576Q9H609 170 aa6.78□□□□□ -1.32
PALB2-204ENST00000566069 ZFYVE1Q9HBF4 777 aa6.78□□□□□ -1.32
PALB2-204ENST00000566069 TMPRSS2O15393 492 aa6.77□□□□□ -1.33
PALB2-204ENST00000566069 FAM87AP0C7U9 286 aa6.77□□□□□ -1.33
PALB2-204ENST00000566069 ITPKAP23677 461 aa6.77□□□□□ -1.33
PALB2-204ENST00000566069 MESP2Q0VG99 397 aa6.77□□□□□ -1.33
PALB2-204ENST00000566069 CILP2Q8IUL8 1156 aa6.77□□□□□ -1.33
PALB2-204ENST00000566069 LRRN4CLQ8ND94 238 aa6.77□□□□□ -1.33
PALB2-204ENST00000566069 TMEM40Q8WWA1 233 aa6.77□□□□□ -1.33
PALB2-204ENST00000566069 RC3H2Q9HBD1 1191 aaKnown RBP6.77□□□□□ -1.33
PALB2-204ENST00000566069 CRIM1Q9NZV1 1036 aa6.77□□□□□ -1.33
PALB2-204ENST00000566069 VAV3Q9UKW4 847 aa6.77□□□□□ -1.33
PALB2-204ENST00000566069 LIG1P18858 919 aa6.76□□□□□ -1.33
PALB2-204ENST00000566069 FKBP4Q02790 459 aaKnown RBP eCLIP6.76□□□□□ -1.33
PALB2-204ENST00000566069 ARID3AQ99856 593 aa6.76□□□□□ -1.33
PALB2-204ENST00000566069 PLAGL2Q9UPG8 496 aa6.76□□□□□ -1.33
PALB2-204ENST00000566069 LEFTY1O75610 366 aa6.75□□□□□ -1.33
PALB2-204ENST00000566069 PRKCQQ04759 706 aa6.75□□□□□ -1.33
PALB2-204ENST00000566069 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
PALB2-204ENST00000566069 FANCD2OSQ96PS1 177 aa6.75□□□□□ -1.33
PALB2-204ENST00000566069 CCDC86Q9H6F5 360 aaKnown RBP6.75□□□□□ -1.33
PALB2-204ENST00000566069 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
PALB2-204ENST00000566069 DISC1Q9NRI5 854 aa6.75□□□□□ -1.33
PALB2-204ENST00000566069 OXCT1P55809 520 aa6.74□□□□□ -1.33
PALB2-204ENST00000566069 SF3B2Q13435 895 aaKnown RBP6.74□□□□□ -1.33
PALB2-204ENST00000566069 PI4K2BQ8TCG2 481 aa6.74□□□□□ -1.33
PALB2-204ENST00000566069 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.74□□□□□ -1.33
PALB2-204ENST00000566069 PCDHGC5Q9Y5F6 944 aa6.74□□□□□ -1.33
PALB2-204ENST00000566069 ZNF862O60290 1169 aa6.73□□□□□ -1.33
PALB2-204ENST00000566069 ECM1Q16610 540 aa6.73□□□□□ -1.33
PALB2-204ENST00000566069 AOC3Q16853 763 aa6.73□□□□□ -1.33
PALB2-204ENST00000566069 DDX54Q8TDD1 881 aaKnown RBP6.73□□□□□ -1.33
PALB2-204ENST00000566069 PPP1R15AO75807 674 aaPredicted RBP6.72□□□□□ -1.33
PALB2-204ENST00000566069 FAAP100Q0VG06 881 aa6.72□□□□□ -1.33
PALB2-204ENST00000566069 KSR1Q8IVT5 923 aa6.72□□□□□ -1.33
PALB2-204ENST00000566069 SMYD4Q8IYR2 804 aaPredicted RBP6.72□□□□□ -1.33
PALB2-204ENST00000566069 DUSP23Q9BVJ7 150 aa6.72□□□□□ -1.33
PALB2-204ENST00000566069 ZC3H12CQ9C0D7 883 aaKnown RBP6.72□□□□□ -1.33
PALB2-204ENST00000566069 MKNK2Q9HBH9 465 aa6.72□□□□□ -1.33
PALB2-204ENST00000566069 ZNF157P51786 506 aaPredicted RBP6.71□□□□□ -1.34
PALB2-204ENST00000566069 PTPN12Q05209 780 aaKnown RBP6.71□□□□□ -1.34
PALB2-204ENST00000566069 AP3B2Q13367 1082 aa6.71□□□□□ -1.34
PALB2-204ENST00000566069 IFI16Q16666 785 aaKnown RBP6.71□□□□□ -1.34
PALB2-204ENST00000566069 ABCB6Q9NP58 842 aa6.71□□□□□ -1.34
PALB2-204ENST00000566069 CARNS1A5YM72 827 aa6.7□□□□□ -1.34
PALB2-204ENST00000566069 ZNF503-AS2A6NEH8 195 aa6.7□□□□□ -1.34
PALB2-204ENST00000566069 ID3Q02535 119 aa6.7□□□□□ -1.34
PALB2-204ENST00000566069 ZNF211Q13398 564 aaPredicted RBP6.7□□□□□ -1.34
PALB2-204ENST00000566069 TTLL4Q14679 1199 aa6.7□□□□□ -1.34
PALB2-204ENST00000566069 KIF4BQ2VIQ3 1234 aa6.7□□□□□ -1.34
PALB2-204ENST00000566069 FAM214BQ7L5A3 538 aa6.7□□□□□ -1.34
PALB2-204ENST00000566069 EHD4Q9H223 541 aa6.7□□□□□ -1.34
PALB2-204ENST00000566069 ATXN3LQ9H3M9 355 aa6.7□□□□□ -1.34
PALB2-204ENST00000566069 ABL1P00519 1130 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 SLFN14P0C7P3 912 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 ORC1Q13415 861 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 PKN1Q16512 942 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 FAM84AQ96KN4 292 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 HRASLS5Q96KN8 279 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 HEXIM2Q96MH2 286 aaKnown RBP6.69□□□□□ -1.34
PALB2-204ENST00000566069 TNKS2Q9H2K2 1166 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 PIDD1Q9HB75 910 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 NPHS2Q9NP85 383 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 PRDM7Q9NQW5 492 aa6.69□□□□□ -1.34
PALB2-204ENST00000566069 CEACAM5P06731 702 aa6.68□□□□□ -1.34
PALB2-204ENST00000566069 NEFMP07197 916 aa6.68□□□□□ -1.34
PALB2-204ENST00000566069 HCLS1P14317 486 aaPredicted RBP6.68□□□□□ -1.34
PALB2-204ENST00000566069 RPS26P11Q5JNZ5 115 aaPredicted RBP6.68□□□□□ -1.34
PALB2-204ENST00000566069 SLC23A3Q6PIS1 610 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms