RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 BOLA1Q9Y3E2 137 aa14.34□□□□□ -0.11
CAPN3-215ENST00000565559 KLRK1P26718 216 aa14.33□□□□□ -0.12
CAPN3-215ENST00000565559 FCGRTP55899 365 aa14.33□□□□□ -0.12
CAPN3-215ENST00000565559 ERO1BQ86YB8 467 aa14.33□□□□□ -0.12
CAPN3-215ENST00000565559 C7orf61Q8IZ16 206 aa14.33□□□□□ -0.12
CAPN3-215ENST00000565559 GREM2Q9H772 168 aa14.33□□□□□ -0.12
CAPN3-215ENST00000565559 LAS1LQ9Y4W2 734 aaKnown RBP14.33□□□□□ -0.12
CAPN3-215ENST00000565559 ZSWIM8A7E2V4 1837 aa14.32□□□□□ -0.12
CAPN3-215ENST00000565559 CHL1O00533 1208 aa14.32□□□□□ -0.12
CAPN3-215ENST00000565559 GTPBP6O43824 516 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-215ENST00000565559 CTGFP29279 349 aa14.32□□□□□ -0.12
CAPN3-215ENST00000565559 FKBP1AP62942 108 aaKnown RBP14.32□□□□□ -0.12
CAPN3-215ENST00000565559 PRKCZQ05513 592 aa14.32□□□□□ -0.12
CAPN3-215ENST00000565559 NECAB2Q7Z6G3 386 aa14.32□□□□□ -0.12
CAPN3-215ENST00000565559 TTLL11Q8NHH1 800 aa14.32□□□□□ -0.12
CAPN3-215ENST00000565559 MPHOSPH8Q99549 860 aa14.32□□□□□ -0.12
CAPN3-215ENST00000565559 ZMYND8Q9ULU4 1186 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-215ENST00000565559 OTOFQ9HC10 1997 aa14.32□□□□□ -0.12
CAPN3-215ENST00000565559 IRF6O14896 467 aa14.31□□□□□ -0.12
CAPN3-215ENST00000565559 PPIL2Q13356 520 aa14.31□□□□□ -0.12
CAPN3-215ENST00000565559 PAWRQ96IZ0 340 aaKnown RBP14.31□□□□□ -0.12
CAPN3-215ENST00000565559 DEFB118Q96PH6 123 aa14.31□□□□□ -0.12
CAPN3-215ENST00000565559 ZNF70Q9UC06 446 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-215ENST00000565559 ECM29Q5VYK3 1845 aa14.31□□□□□ -0.12
CAPN3-215ENST00000565559 ADCY3O60266 1144 aa14.3□□□□□ -0.12
CAPN3-215ENST00000565559 ZNF804AQ7Z570 1209 aa14.3□□□□□ -0.12
CAPN3-215ENST00000565559 ANKRD23Q86SG2 305 aa14.3□□□□□ -0.12
CAPN3-215ENST00000565559 TEPSINQ96N21 525 aa14.3□□□□□ -0.12
CAPN3-215ENST00000565559 UBE2OQ9C0C9 1292 aaKnown RBP14.3□□□□□ -0.12
CAPN3-215ENST00000565559 SNCAIPQ9Y6H5 919 aa14.3□□□□□ -0.12
CAPN3-215ENST00000565559 AOX1Q06278 1338 aa14.3□□□□□ -0.12
CAPN3-215ENST00000565559 ADGRA2Q96PE1 1338 aa14.3□□□□□ -0.12
CAPN3-215ENST00000565559 IRS2Q9Y4H2 1338 aa14.3□□□□□ -0.12
CAPN3-215ENST00000565559 TCP10L2B9ZVM9 353 aa14.29□□□□□ -0.12
CAPN3-215ENST00000565559 PDHXO00330 501 aa14.29□□□□□ -0.12
CAPN3-215ENST00000565559 DDX58O95786 925 aaKnown RBP14.29□□□□□ -0.12
CAPN3-215ENST00000565559 INHAP05111 366 aa14.29□□□□□ -0.12
CAPN3-215ENST00000565559 MAGEA10P43363 369 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-215ENST00000565559 HOOK2Q96ED9 719 aa14.29□□□□□ -0.12
CAPN3-215ENST00000565559 WRNIP1Q96S55 665 aa14.29□□□□□ -0.12
CAPN3-215ENST00000565559 TMEM39BQ9GZU3 492 aa14.29□□□□□ -0.12
CAPN3-215ENST00000565559 FAM205AQ6ZU69 1335 aa14.29□□□□□ -0.12
CAPN3-215ENST00000565559 COL9A1P20849 921 aa14.28□□□□□ -0.12
CAPN3-215ENST00000565559 TMPOP42166 694 aaKnown RBP14.28□□□□□ -0.12
CAPN3-215ENST00000565559 DUSP27Q5VZP5 1158 aa14.28□□□□□ -0.12
CAPN3-215ENST00000565559 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
CAPN3-215ENST00000565559 PARK7Q99497 189 aaKnown RBP14.28□□□□□ -0.12
CAPN3-215ENST00000565559 METTL22Q9BUU2 404 aaPredicted RBP14.28□□□□□ -0.12
CAPN3-215ENST00000565559 TDRD3Q9H7E2 651 aaKnown RBP14.28□□□□□ -0.12
CAPN3-215ENST00000565559 SCUBE2Q9NQ36 999 aa14.28□□□□□ -0.12
CAPN3-215ENST00000565559 SERPINA10Q9UK55 444 aa14.28□□□□□ -0.12
CAPN3-215ENST00000565559 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
CAPN3-215ENST00000565559 IL1R1P14778 569 aa14.27□□□□□ -0.13
CAPN3-215ENST00000565559 SYN1P17600 705 aa14.27□□□□□ -0.13
CAPN3-215ENST00000565559 PPATQ06203 517 aa14.27□□□□□ -0.13
CAPN3-215ENST00000565559 CHRNDQ07001 517 aa14.27□□□□□ -0.13
CAPN3-215ENST00000565559 FAM109BQ6ICB4 259 aaPredicted RBP14.27□□□□□ -0.13
CAPN3-215ENST00000565559 MAMSTRQ6ZN01 415 aa14.27□□□□□ -0.13
CAPN3-215ENST00000565559 ANKLE1Q8NAG6 615 aa14.27□□□□□ -0.13
CAPN3-215ENST00000565559 PXYLP1Q8TE99 480 aa14.27□□□□□ -0.13
CAPN3-215ENST00000565559 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.13
CAPN3-215ENST00000565559 ZKSCAN4Q969J2 545 aaPredicted RBP14.27□□□□□ -0.13
CAPN3-215ENST00000565559 CRISPLD2Q9H0B8 497 aa14.27□□□□□ -0.13
CAPN3-215ENST00000565559 PHAXQ9H814 394 aaKnown RBP14.27□□□□□ -0.13
CAPN3-215ENST00000565559 PAK6Q9NQU5 681 aaPredicted RBP14.27□□□□□ -0.13
CAPN3-215ENST00000565559 JAG2Q9Y219 1238 aa14.27□□□□□ -0.13
CAPN3-215ENST00000565559 ELNP15502 786 aa14.26□□□□□ -0.13
CAPN3-215ENST00000565559 ITGA6P23229 1130 aa14.26□□□□□ -0.13
CAPN3-215ENST00000565559 DDX10Q13206 875 aaKnown RBP14.26□□□□□ -0.13
CAPN3-215ENST00000565559 C15orf52Q6ZUT6 534 aaKnown RBP14.26□□□□□ -0.13
CAPN3-215ENST00000565559 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.26□□□□□ -0.13
CAPN3-215ENST00000565559 GUCD1Q96NT3 240 aa14.26□□□□□ -0.13
CAPN3-215ENST00000565559 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
CAPN3-215ENST00000565559 TTF2Q9UNY4 1162 aaKnown RBP14.26□□□□□ -0.13
CAPN3-215ENST00000565559 VCANP13611 3396 aa14.26□□□□□ -0.13
CAPN3-215ENST00000565559 FLT3LGP49771 235 aa14.25□□□□□ -0.13
CAPN3-215ENST00000565559 NEXNQ0ZGT2 675 aa14.25□□□□□ -0.13
CAPN3-215ENST00000565559 DCAF15Q66K64 600 aa14.25□□□□□ -0.13
CAPN3-215ENST00000565559 DZIP1LQ8IYY4 767 aaKnown RBP14.25□□□□□ -0.13
CAPN3-215ENST00000565559 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
CAPN3-215ENST00000565559 GABRQQ9UN88 632 aa14.25□□□□□ -0.13
CAPN3-215ENST00000565559 SPEF2Q9C093 1822 aa14.25□□□□□ -0.13
CAPN3-215ENST00000565559 IRF5Q13568 498 aa14.24□□□□□ -0.13
CAPN3-215ENST00000565559 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
CAPN3-215ENST00000565559 MFSD14BQ5SR56 506 aa14.24□□□□□ -0.13
CAPN3-215ENST00000565559 TMEM121BQ9BXQ6 578 aaPredicted RBP14.24□□□□□ -0.13
CAPN3-215ENST00000565559 TTC28Q96AY4 2481 aa14.23□□□□□ -0.13
CAPN3-215ENST00000565559 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
CAPN3-215ENST00000565559 BCRP11274 1271 aa14.23□□□□□ -0.13
CAPN3-215ENST00000565559 ZNF697Q5TEC3 545 aa14.23□□□□□ -0.13
CAPN3-215ENST00000565559 FAM161BQ96MY7 647 aa14.23□□□□□ -0.13
CAPN3-215ENST00000565559 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.13
CAPN3-215ENST00000565559 TMOD2Q9NZR1 351 aa14.23□□□□□ -0.13
CAPN3-215ENST00000565559 MAP3K2Q9Y2U5 619 aa14.23□□□□□ -0.13
CAPN3-215ENST00000565559 SPTBN5Q9NRC6 3674 aaKnown RBP14.22□□□□□ -0.13
CAPN3-215ENST00000565559 TAF5LO75529 589 aa14.22□□□□□ -0.13
CAPN3-215ENST00000565559 CRKP46108 304 aa14.22□□□□□ -0.13
CAPN3-215ENST00000565559 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
CAPN3-215ENST00000565559 ZNF341Q9BYN7 854 aa14.22□□□□□ -0.13
CAPN3-215ENST00000565559 C11orf49Q9H6J7 331 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms