RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 SSC5DA1L4H1 1573 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 FAM155AB1AL88 458 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-212ENST00000565517 UBE2Q2LH0YL09 131 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 APBB1O00213 710 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 CYP2E1P05181 493 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-212ENST00000565517 IFIT2P09913 472 aaKnown RBP18.87■□□□□ 0.61
COMMD4-212ENST00000565517 GRM1Q13255 1194 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 LDLRAD1Q5T700 205 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 MOB2Q70IA6 237 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 NSUN4Q96CB9 384 aaKnown RBP18.87■□□□□ 0.61
COMMD4-212ENST00000565517 TMEM39BQ9GZU3 492 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 SNRKQ9NRH2 765 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 WBP1LQ9NX94 342 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 LRP2BPQ9P2M1 347 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 PCDHB15Q9Y5E8 787 aa18.87■□□□□ 0.61
COMMD4-212ENST00000565517 AK9Q5TCS8 1911 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 MROH7-TTC4A0A0A0MT08 1334 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 GPR75-ASB3A0A0A6YYF3 556 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 AOC2O75106 756 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 SLC10A3P09131 477 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 HSPA1AP0DMV8 641 aaKnown RBP18.86■□□□□ 0.61
COMMD4-212ENST00000565517 HSPA1BP0DMV9 641 aaKnown RBP18.86■□□□□ 0.61
COMMD4-212ENST00000565517 ZAP70P43403 619 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 CACNB3P54284 484 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 ZNF384Q8TF68 577 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 LRRCC1Q9C099 1032 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 USP40Q9NVE5 1235 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 RAI14Q9P0K7 980 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 ANGEL1Q9UNK9 670 aaKnown RBP18.86■□□□□ 0.61
COMMD4-212ENST00000565517 MAST2Q6P0Q8 1798 aa18.86■□□□□ 0.61
COMMD4-212ENST00000565517 RPAP1Q9BWH6 1393 aaPredicted RBP18.85■□□□□ 0.61
COMMD4-212ENST00000565517 MAP4K4O95819 1239 aaPredicted RBP18.85■□□□□ 0.61
COMMD4-212ENST00000565517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.85■□□□□ 0.61
COMMD4-212ENST00000565517 FAM151AQ8WW52 585 aa18.85■□□□□ 0.61
COMMD4-212ENST00000565517 HOOK2Q96ED9 719 aa18.85■□□□□ 0.61
COMMD4-212ENST00000565517 DOCK2Q92608 1830 aa18.84■□□□□ 0.61
COMMD4-212ENST00000565517 USP2O75604 605 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-212ENST00000565517 IREB2P48200 963 aaKnown RBP18.84■□□□□ 0.61
COMMD4-212ENST00000565517 PRKG1Q13976 671 aa18.84■□□□□ 0.61
COMMD4-212ENST00000565517 RASAL3Q86YV0 1011 aa18.84■□□□□ 0.61
COMMD4-212ENST00000565517 IDI2Q9BXS1 227 aa18.84■□□□□ 0.61
COMMD4-212ENST00000565517 BTDP43251 543 aa18.83■□□□□ 0.6
COMMD4-212ENST00000565517 TMED8Q6PL24 325 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-212ENST00000565517 REM2Q8IYK8 340 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-212ENST00000565517 NAA16Q6N069 864 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-212ENST00000565517 AIDAQ96BJ3 306 aa18.82■□□□□ 0.6
COMMD4-212ENST00000565517 FAM198AQ9UFP1 575 aa18.82■□□□□ 0.6
COMMD4-212ENST00000565517 ENTPD3O75355 529 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 NPM3O75607 178 aaKnown RBP18.81■□□□□ 0.6
COMMD4-212ENST00000565517 RHBDL3P58872 404 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 NFIAQ12857 509 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 CDAN1Q8IWY9 1227 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 ANKRD13AQ8IZ07 590 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 SLC10A4Q96EP9 437 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 ZIC5Q96T25 663 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 BEGAINQ9BUH8 593 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 PIH1D3Q9NQM4 214 aaKnown RBP18.81■□□□□ 0.6
COMMD4-212ENST00000565517 FZD1Q9UP38 647 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 SUPT16HQ9Y5B9 1047 aaKnown RBP18.81■□□□□ 0.6
COMMD4-212ENST00000565517 OTOFQ9HC10 1997 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 RFX7Q2KHR2 1363 aa18.81■□□□□ 0.6
COMMD4-212ENST00000565517 WDHD1O75717 1129 aaPredicted RBP18.8■□□□□ 0.6
COMMD4-212ENST00000565517 ATP5JP18859 108 aa18.8■□□□□ 0.6
COMMD4-212ENST00000565517 KIF23Q02241 960 aaPredicted RBP18.8■□□□□ 0.6
COMMD4-212ENST00000565517 TCP10Q12799 353 aa18.8■□□□□ 0.6
COMMD4-212ENST00000565517 TTF1Q15361 905 aaPredicted RBP18.8■□□□□ 0.6
COMMD4-212ENST00000565517 LAMB1P07942 1786 aa18.79■□□□□ 0.6
COMMD4-212ENST00000565517 FOXN1O15353 648 aa18.79■□□□□ 0.6
COMMD4-212ENST00000565517 CA12O43570 354 aa18.79■□□□□ 0.6
COMMD4-212ENST00000565517 SMARCA5O60264 1052 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-212ENST00000565517 BAG3O95817 575 aa18.79■□□□□ 0.6
COMMD4-212ENST00000565517 CTCFP49711 727 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-212ENST00000565517 RGS3P49796 1198 aa18.79■□□□□ 0.6
COMMD4-212ENST00000565517 PPP4CP60510 307 aa18.79■□□□□ 0.6
COMMD4-212ENST00000565517 DCAF15Q66K64 600 aa18.79■□□□□ 0.6
COMMD4-212ENST00000565517 NOL10Q9BSC4 688 aaKnown RBP18.79■□□□□ 0.6
COMMD4-212ENST00000565517 CDK5RAP2Q96SN8 1893 aa18.78■□□□□ 0.6
COMMD4-212ENST00000565517 IDH1O75874 414 aaKnown RBP18.78■□□□□ 0.6
COMMD4-212ENST00000565517 PLCG2P16885 1265 aa18.78■□□□□ 0.6
COMMD4-212ENST00000565517 MAP3K9P80192 1104 aa18.78■□□□□ 0.6
COMMD4-212ENST00000565517 MAP3K12Q12852 859 aa18.78■□□□□ 0.6
COMMD4-212ENST00000565517 HDAC1Q13547 482 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-212ENST00000565517 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.78■□□□□ 0.6
COMMD4-212ENST00000565517 CSRNP1Q96S65 589 aa18.78■□□□□ 0.6
COMMD4-212ENST00000565517 ANTXR1Q9H6X2 564 aa18.78■□□□□ 0.6
COMMD4-212ENST00000565517 NDUFB9Q9Y6M9 179 aa18.78■□□□□ 0.6
COMMD4-212ENST00000565517 FOCADQ5VW36 1801 aa18.78■□□□□ 0.6
COMMD4-212ENST00000565517 SPRYD7Q5W111 196 aa18.77■□□□□ 0.6
COMMD4-212ENST00000565517 CERS3Q8IU89 383 aa18.77■□□□□ 0.6
COMMD4-212ENST00000565517 ZFPM1Q8IX07 1006 aa18.77■□□□□ 0.6
COMMD4-212ENST00000565517 CLMNQ96JQ2 1002 aa18.77■□□□□ 0.6
COMMD4-212ENST00000565517 HAUS7Q99871 368 aa18.77■□□□□ 0.6
COMMD4-212ENST00000565517 BCL11AQ9H165 835 aa18.77■□□□□ 0.6
COMMD4-212ENST00000565517 ZBTB48P10074 688 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-212ENST00000565517 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-212ENST00000565517 GCC1Q96CN9 775 aa18.76■□□□□ 0.59
COMMD4-212ENST00000565517 ZNF341Q9BYN7 854 aa18.76■□□□□ 0.59
COMMD4-212ENST00000565517 BOLA2Q9H3K6 86 aa18.76■□□□□ 0.59
COMMD4-212ENST00000565517 DDX4Q9NQI0 724 aaKnown RBP18.76■□□□□ 0.59
COMMD4-212ENST00000565517 MYH7P12883 1935 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms