RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TTC39AQ5SRH9 613 aa16.78■□□□□ 0.28
VPS9D1-204ENST00000565023 CDC42EP5Q6NZY7 148 aa16.78■□□□□ 0.28
VPS9D1-204ENST00000565023 CEP85Q6P2H3 762 aa16.78■□□□□ 0.28
VPS9D1-204ENST00000565023 ANKRD13AQ8IZ07 590 aa16.78■□□□□ 0.28
VPS9D1-204ENST00000565023 ZGPATQ8N5A5 531 aaKnown RBP16.78■□□□□ 0.28
VPS9D1-204ENST00000565023 WNK4Q96J92 1243 aa16.78■□□□□ 0.28
VPS9D1-204ENST00000565023 USP40Q9NVE5 1235 aa16.78■□□□□ 0.28
VPS9D1-204ENST00000565023 HMG20BQ9P0W2 317 aa16.78■□□□□ 0.28
VPS9D1-204ENST00000565023 FPGT-TNNI3KV9GXZ4 949 aa16.78■□□□□ 0.28
VPS9D1-204ENST00000565023 TBC1D9Q6ZT07 1266 aa16.77■□□□□ 0.28
VPS9D1-204ENST00000565023 ERICH6Q7L0X2 663 aa16.77■□□□□ 0.28
VPS9D1-204ENST00000565023 DBNDD2Q9BQY9 259 aa16.77■□□□□ 0.28
VPS9D1-204ENST00000565023 SNRKQ9NRH2 765 aa16.77■□□□□ 0.28
VPS9D1-204ENST00000565023 SAGE1Q9NXZ1 904 aa16.77■□□□□ 0.28
VPS9D1-204ENST00000565023 EXOC6BQ9Y2D4 811 aa16.77■□□□□ 0.28
VPS9D1-204ENST00000565023 SREBF2Q12772 1141 aa16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 NFIAQ12857 509 aa16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 SPTY2D1Q68D10 685 aaPredicted RBP16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 MIGA2Q7L4E1 593 aa16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 FAM83AQ86UY5 434 aa16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 REM2Q8IYK8 340 aaPredicted RBP16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 SPATA5Q8NB90 893 aa16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 CCDC8Q9H0W5 538 aaPredicted RBP16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 RAI14Q9P0K7 980 aa16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 MYO5AQ9Y4I1 1855 aaKnown RBP16.76■□□□□ 0.27
VPS9D1-204ENST00000565023 APBB1O00213 710 aa16.75■□□□□ 0.27
VPS9D1-204ENST00000565023 GJA5P36382 358 aa16.75■□□□□ 0.27
VPS9D1-204ENST00000565023 MCAMP43121 646 aa16.75■□□□□ 0.27
VPS9D1-204ENST00000565023 DGKZQ13574 1117 aa16.75■□□□□ 0.27
VPS9D1-204ENST00000565023 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.75■□□□□ 0.27
VPS9D1-204ENST00000565023 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
VPS9D1-204ENST00000565023 UQCRFS1P1P0C7P4 283 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 ARID4AP29374 1257 aaPredicted RBP16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 BTDP43251 543 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 TM4SF4P48230 202 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 MECOMQ03112 1051 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 PICALMQ13492 652 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 VGLL4Q14135 290 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 PDE3AQ14432 1141 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 CCDC158Q5M9N0 1113 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 C20orf194Q5TEA3 1177 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 FAM151AQ8WW52 585 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 OPTNQ96CV9 577 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 TLR7Q9NYK1 1049 aaKnown RBP16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 DDX19BQ9UMR2 479 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 CSADQ9Y600 493 aa16.74■□□□□ 0.27
VPS9D1-204ENST00000565023 PDS5AQ29RF7 1337 aaKnown RBP16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 MANSC4A6NHS7 340 aaPredicted RBP16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 FKBP1CQ5VVH2 108 aa16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 ZFPM1Q8IX07 1006 aa16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 SLF2Q8IX21 1173 aa16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 MCOLN1Q9GZU1 580 aa16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 GPR108Q9NPR9 543 aa16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 LRP2BPQ9P2M1 347 aa16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 FAM198AQ9UFP1 575 aa16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 NOP58Q9Y2X3 529 aaKnown RBP16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 DOCK2Q92608 1830 aa16.73■□□□□ 0.27
VPS9D1-204ENST00000565023 MROH7-TTC4A0A0A0MT08 1334 aa16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 ZBTB48P10074 688 aaPredicted RBP16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 RGS3P49796 1198 aa16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 DCAF15Q66K64 600 aa16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 ZSCAN29Q8IWY8 852 aaPredicted RBP16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 ZKSCAN4Q969J2 545 aaPredicted RBP16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 EAF2Q96CJ1 260 aaPredicted RBP16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 OTUD5Q96G74 571 aa16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 IL1RAPL2Q9NP60 686 aa16.72■□□□□ 0.27
VPS9D1-204ENST00000565023 GAKO14976 1311 aa16.71■□□□□ 0.27
VPS9D1-204ENST00000565023 CCDC85CA6NKD9 419 aa16.71■□□□□ 0.27
VPS9D1-204ENST00000565023 AACSQ86V21 672 aa16.71■□□□□ 0.27
VPS9D1-204ENST00000565023 IFNL1Q8IU54 200 aa16.71■□□□□ 0.27
VPS9D1-204ENST00000565023 HOOK2Q96ED9 719 aa16.71■□□□□ 0.27
VPS9D1-204ENST00000565023 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
VPS9D1-204ENST00000565023 R3HDMLQ9H3Y0 253 aa16.71■□□□□ 0.27
VPS9D1-204ENST00000565023 DBNLQ9UJU6 430 aaKnown RBP16.71■□□□□ 0.27
VPS9D1-204ENST00000565023 RPAP1Q9BWH6 1393 aaPredicted RBP16.71■□□□□ 0.27
VPS9D1-204ENST00000565023 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
VPS9D1-204ENST00000565023 IGF2BP3O00425 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
VPS9D1-204ENST00000565023 INPP5BP32019 993 aa16.7■□□□□ 0.26
VPS9D1-204ENST00000565023 ZAP70P43403 619 aa16.7■□□□□ 0.26
VPS9D1-204ENST00000565023 ZNF384Q8TF68 577 aa16.7■□□□□ 0.26
VPS9D1-204ENST00000565023 NSUN4Q96CB9 384 aaKnown RBP16.7■□□□□ 0.26
VPS9D1-204ENST00000565023 LAMB1P07942 1786 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 ZBTB22O15209 634 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 LDHCP07864 332 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 SLURP2P0DP57 97 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 GSTO1P78417 241 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 ERC1Q8IUD2 1116 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 ZNF296Q8WUU4 475 aaPredicted RBP16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 DDX4Q9NQI0 724 aaKnown RBP16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 SNCAIPQ9Y6H5 919 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 NDUFB9Q9Y6M9 179 aa16.69■□□□□ 0.26
VPS9D1-204ENST00000565023 CCL15-CCL14A0A0B4J2E2 113 aa16.68■□□□□ 0.26
VPS9D1-204ENST00000565023 GPR25O00155 361 aa16.68■□□□□ 0.26
VPS9D1-204ENST00000565023 HMMRO75330 724 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms