RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PLVAPQ9BX97 442 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 PALLDQ8WX93 1383 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 SYT1P21579 422 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 CASP7P55210 303 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 GRIN1Q05586 938 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 LUZP1Q86V48 1076 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 PAG1Q9NWQ8 432 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 TMOD4Q9NZQ9 345 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 ZNF609O15014 1411 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 HMGN5P82970 282 aaKnown RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 PRAMEF18Q5VWM3 479 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 PDCL2Q8N4E4 241 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 PDILTQ8N807 584 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 ZNF713Q8N859 430 aaPredicted RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 DYNLL2Q96FJ2 89 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 TEX13AQ9BXU3 409 aaPredicted RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 ATP2B2Q01814 1243 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 HOOK2Q96ED9 719 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 DCAF5Q96JK2 942 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 USP21Q9UK80 565 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 CHD7Q9P2D1 2997 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 B4DLN1 442 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 MRPL12P52815 198 aaKnown RBP3.88□□□□□ -1.79
CHD9-213ENST00000564845 CWC25Q9NXE8 425 aaPredicted RBP3.88□□□□□ -1.79
CHD9-213ENST00000564845 GOLGA6CA6NDK9 693 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 GOLGA6BA6NDN3 693 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 GOLGA6DP0CG33 693 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 GRIPAP1Q4V328 841 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 GOLGA6AQ9NYA3 693 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 KIF6Q6ZMV9 814 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 DEFB132Q7Z7B7 95 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 RASGRP4Q8TDF6 673 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 GLT8D2Q9H1C3 349 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 GRPEL1Q9HAV7 217 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.88□□□□□ -1.796e-7■■■■■ 88.2
CHD9-213ENST00000564845 ORC3Q9UBD5 711 aaPredicted RBP3.88□□□□□ -1.79
CHD9-213ENST00000564845 TJP1Q07157 1748 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 A0A1B0GVL5 298 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 WNT7AO00755 349 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 FOXN1O15353 648 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 SGSM2O43147 1006 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 SMC2O95347 1197 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 TXLNAP40222 546 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 SCRN1Q12765 414 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 PRKG1Q13976 671 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 TOB2Q14106 344 aaPredicted RBP3.88□□□□□ -1.79
CHD9-213ENST00000564845 ZNF827Q17R98 1081 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 FAM177A1Q8N128 213 aaPredicted RBP3.88□□□□□ -1.79
CHD9-213ENST00000564845 MNS1Q8NEH6 495 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 ECHDC1Q9NTX5 307 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.88□□□□□ -1.79
CHD9-213ENST00000564845 ANKIB1Q9P2G1 1089 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 WDR17Q8IZU2 1322 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 TRIOO75962 3097 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 NR1I2O75469 434 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 BMP15O95972 392 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 FAM182AQ5T1J6 154 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 LCORLQ8N3X6 602 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 CLIC6Q96NY7 704 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 MAPK8IP1Q9UQF2 711 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 ABCA3Q99758 1704 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 KCPQ6ZWJ8 1503 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 CCDC172P0C7W6 258 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 LARP1BQ659C4 914 aaKnown RBP3.88□□□□□ -1.79
CHD9-213ENST00000564845 CARNS1A5YM72 827 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 PEX10O60683 326 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 FGAP02671 866 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 RFX5P48382 616 aaPredicted RBP3.88□□□□□ -1.79
CHD9-213ENST00000564845 VPS37DQ86XT2 251 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 GPATCH11Q8N954 259 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 WASF1Q92558 559 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 LMBRD1Q9NUN5 540 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 SMC3Q9UQE7 1217 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 ZNF532Q9HCE3 1301 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 CYP19A1P11511 503 aaPredicted RBP3.88□□□□□ -1.79
CHD9-213ENST00000564845 CETN2P41208 172 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 BCS1LQ9Y276 419 aa3.88□□□□□ -1.79
CHD9-213ENST00000564845 PXDNLA1KZ92 1463 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 LOC102724428A0A0B4J2F2 783 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 SIK1P57059 783 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 TRDNQ13061 729 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 IFIT5Q13325 482 aaKnown RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 TRIM29Q14134 588 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 MAP3K11Q16584 847 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 TNS2Q63HR2 1409 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 APBB1IPQ7Z5R6 666 aaPredicted RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 TBC1D10CQ8IV04 446 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.87□□□□□ -1.79
CHD9-213ENST00000564845 V9GYY5 206 aaPredicted RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 FAM196AQ6ZSG2 479 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 BCL9LQ86UU0 1499 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 WDR87Q6ZQQ6 2873 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 LRP5O75197 1615 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 GOLGA6L9A6NEM1 432 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 CHRNA5P30532 468 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 GIGYF2Q6Y7W6 1299 aaKnown RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 NLRP10Q86W26 655 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 LINS1Q8NG48 757 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 PPM1EQ8WY54 764 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms